# emapper version: emapper-2.0.1 emapper DB: 2.0 # command: ./emapper.py -m diamond --seed_ortholog_evalue 0.00001 --data_dir /home/bayegy/Databases/emapper/data_dir2.0.1/ --cpu 30 --temp_dir /media/bayegy/disk2/bayegy/pipeline_demos/binning/share2/Bin_all/emapper//MAG.C3.5/_tmp -i /media/bayegy/disk2/bayegy/pipeline_demos/binning/share2/Bin_all/Bin_prokka//MAG.C3.5/MAG.C3.5.faa -o /media/bayegy/disk2/bayegy/pipeline_demos/binning/share2/Bin_all/emapper//MAG.C3.5/MAG.C3.5 --usemem --override # time: Wed Feb 25 23:45:36 2026 #query_name seed_eggNOG_ortholog seed_ortholog_evalue seed_ortholog_score best_tax_level Preferred_name GOs EC KEGG_ko KEGG_Pathway KEGG_Module KEGG_Reaction KEGG_rclass BRITE KEGG_TC CAZy BiGG_Reaction taxonomic scope eggNOG OGs best eggNOG OG COG Functional cat. eggNOG free text desc. MAG.C3.5_00002 583345.Mmol_2252 1.8e-37 161.8 Nitrosomonadales gatC 6.3.5.6,6.3.5.7 ko:K02435 ko00970,ko01100,map00970,map01100 R03905,R04212 RC00010 ko00000,ko00001,ko01000,ko03029 iAF987.Gmet_0076 Bacteria 1MZQP@1224,2KN54@206350,2VUFB@28216,COG0721@1,COG0721@2 NA|NA|NA J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) MAG.C3.5_00003 582744.Msip34_2531 7e-238 829.7 Nitrosomonadales gatA 6.3.5.6,6.3.5.7 ko:K02433 ko00970,ko01100,map00970,map01100 R03905,R04212 RC00010 ko00000,ko00001,ko01000,ko03029 Bacteria 1MUVQ@1224,2KKBX@206350,2VIG3@28216,COG0154@1,COG0154@2 NA|NA|NA J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) MAG.C3.5_00004 582744.Msip34_2797 1.7e-185 655.6 Nitrosomonadales dnaQ GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0016020,GO:0030312,GO:0032991,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0071944,GO:1902494,GO:1905347,GO:1905348,GO:1990391 2.7.7.7 ko:K02342,ko:K03703,ko:K03763,ko:K05984 ko00230,ko00240,ko01100,ko03030,ko03420,ko03430,ko03440,map00230,map00240,map01100,map03030,map03420,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1MV8Z@1224,2KKQB@206350,2VK3W@28216,COG0322@1,COG0322@2,COG0847@1,COG0847@2 NA|NA|NA L GIY-YIG type nucleases (URI domain) MAG.C3.5_00005 582744.Msip34_0726 2.9e-189 668.3 Nitrosomonadales suv3 3.6.4.13 ko:K17675 ko00000,ko01000,ko03029 Bacteria 1MVD6@1224,2KKRH@206350,2VKPN@28216,COG4581@1,COG4581@2 NA|NA|NA L PFAM helicase domain protein MAG.C3.5_00006 1163617.SCD_n02366 5.9e-106 390.6 Betaproteobacteria 2.7.1.165 ko:K11529 ko00030,ko00260,ko00561,ko00630,ko00680,ko01100,ko01120,ko01130,ko01200,map00030,map00260,map00561,map00630,map00680,map01100,map01120,map01130,map01200 M00346 R08572 RC00002,RC00428 ko00000,ko00001,ko00002,ko01000 Bacteria 1MW0V@1224,2VIX0@28216,COG2833@1,COG2833@2 NA|NA|NA S protein conserved in bacteria MAG.C3.5_00007 265072.Mfla_0845 1e-56 226.5 Bacteria ko:K07000 ko00000 Bacteria COG3150@1,COG3150@2 NA|NA|NA G esterase MAG.C3.5_00009 1132855.KB913035_gene2416 2.3e-35 154.8 Nitrosomonadales yhhW_2 ko:K06911 ko00000 Bacteria 1MVSW@1224,2KNQA@206350,2VHPA@28216,COG1741@1,COG1741@2 NA|NA|NA S Belongs to the pirin family MAG.C3.5_00010 582744.Msip34_2682 5.3e-108 397.1 Nitrosomonadales Bacteria 1MU5N@1224,2KP6U@206350,2VJFI@28216,COG1335@1,COG1335@2 NA|NA|NA Q Isochorismatase family MAG.C3.5_00011 1165096.ARWF01000001_gene1049 3.2e-135 488.0 Nitrosomonadales dedA_2 Bacteria 1R6F1@1224,2KKCX@206350,2VMW2@28216,COG0586@1,COG0586@2,COG0607@1,COG0607@2 NA|NA|NA P SNARE associated Golgi protein MAG.C3.5_00012 400682.PAC_15708150 8.3e-39 166.4 Opisthokonta Opisthokonta 2D16N@1,2SGX8@2759,3ASE6@33154 NA|NA|NA MAG.C3.5_00013 1122236.KB905141_gene1165 1.8e-28 131.7 Nitrosomonadales ko:K04752 ko00000 Bacteria 1PJQJ@1224,2KNWY@206350,2W84E@28216,COG0347@1,COG0347@2 NA|NA|NA E Belongs to the P(II) protein family MAG.C3.5_00014 1502770.JQMG01000001_gene1261 6.8e-104 384.0 Nitrosomonadales sbtA ko:K07086 ko00000 Bacteria 1N85P@1224,2KNGI@206350,2VI5D@28216,COG3329@1,COG3329@2 NA|NA|NA S Na+-dependent bicarbonate transporter superfamily MAG.C3.5_00015 582744.Msip34_0812 2.3e-63 248.4 Nitrosomonadales cheW ko:K02659,ko:K03408 ko02020,ko02025,ko02030,map02020,map02025,map02030 ko00000,ko00001,ko02035,ko02044 Bacteria 1RD1W@1224,2KMNJ@206350,2VR41@28216,COG0835@1,COG0835@2 NA|NA|NA NT PFAM CheW domain protein MAG.C3.5_00016 666681.M301_1686 1.5e-303 1048.5 Nitrosomonadales cheA GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006935,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009892,GO:0009893,GO:0009987,GO:0010562,GO:0010604,GO:0010605,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019220,GO:0019222,GO:0019538,GO:0019904,GO:0023014,GO:0023052,GO:0031323,GO:0031324,GO:0031325,GO:0031399,GO:0031400,GO:0031401,GO:0032101,GO:0032268,GO:0032269,GO:0032270,GO:0032879,GO:0032991,GO:0035303,GO:0035304,GO:0035306,GO:0035307,GO:0035556,GO:0036211,GO:0040011,GO:0040012,GO:0042221,GO:0042330,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045937,GO:0046777,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0050920,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051248,GO:0051270,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0098561,GO:0140096,GO:1901564,GO:1901873,GO:1901875,GO:1902021,GO:2000145 2.7.13.3 ko:K02487,ko:K03407,ko:K06596 ko02020,ko02025,ko02030,map02020,map02025,map02030 M00506,M00507 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035 Bacteria 1MUAG@1224,2KM67@206350,2VI5B@28216,COG0643@1,COG0643@2,COG2198@1,COG2198@2 NA|NA|NA NT Signal transducing histidine kinase, homodimeric MAG.C3.5_00017 583345.Mmol_1259 2.5e-59 234.6 Nitrosomonadales Bacteria 1RHDD@1224,2KMTB@206350,2VSDT@28216,COG0745@1,COG0745@2 NA|NA|NA T PFAM response regulator receiver MAG.C3.5_00018 666681.M301_1688 4.9e-65 254.2 Bacteria ko:K03406 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko02035 Bacteria COG0840@1,COG0840@2 NA|NA|NA NT transmembrane signaling receptor activity MAG.C3.5_00019 1175306.GWL_23300 1e-117 429.9 Oxalobacteraceae motB GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0009288,GO:0009425,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044425,GO:0044459,GO:0044461,GO:0044463,GO:0044464,GO:0071944,GO:0120100,GO:0120101 ko:K02557 ko02030,ko02040,map02030,map02040 ko00000,ko00001,ko02000,ko02035 1.A.30.1 Bacteria 1MW1Y@1224,2VHMJ@28216,472EQ@75682,COG1360@1,COG1360@2 NA|NA|NA N Membrane MotB of proton-channel complex MotA/MotB MAG.C3.5_00020 864073.HFRIS_010359 1.3e-130 472.6 Oxalobacteraceae motA ko:K02556 ko02020,ko02030,ko02040,map02020,map02030,map02040 ko00000,ko00001,ko02000,ko02035 1.A.30.1 Bacteria 1MXK3@1224,2VHPX@28216,473RR@75682,COG1291@1,COG1291@2 NA|NA|NA N MotA/TolQ/ExbB proton channel family MAG.C3.5_00021 666681.M301_1691 1.1e-69 270.0 Nitrosomonadales 2.1.1.72 ko:K00571 ko00000,ko01000,ko02048 Bacteria 1MYRV@1224,2KMTK@206350,2VT3S@28216,COG2890@1,COG2890@2 NA|NA|NA J protein-(glutamine-N5) methyltransferase activity MAG.C3.5_00022 1502770.JQMG01000001_gene1862 1.8e-77 295.4 Nitrosomonadales flhC GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051302,GO:0051782,GO:0065007,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 ko:K02402 ko02020,ko02024,ko02026,ko02040,map02020,map02024,map02026,map02040 ko00000,ko00001,ko02035 Bacteria 1N7I6@1224,2DBG4@1,2KKT9@206350,2VQ2P@28216,2Z927@2 NA|NA|NA N Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways MAG.C3.5_00023 1101195.Meth11DRAFT_1519 1.1e-34 152.5 Nitrosomonadales flhD GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 ko:K02403 ko02020,ko02024,ko02026,ko02040,map02020,map02024,map02026,map02040 ko00000,ko00001,ko02035 Bacteria 1N25K@1224,2AX91@1,2KMYF@206350,2VSYQ@28216,31P80@2 NA|NA|NA N Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways MAG.C3.5_00024 582744.Msip34_0745 5.2e-105 387.9 Nitrosomonadales 2.7.13.3 ko:K07675 ko02020,map02020 M00473 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1MWPN@1224,2KKYC@206350,2VJV5@28216,COG4585@1,COG4585@2 NA|NA|NA T histidine kinase dimerisation and phosphoacceptor region MAG.C3.5_00025 582744.Msip34_0746 1.1e-78 299.7 Nitrosomonadales ko:K02282,ko:K07689 ko02020,ko02025,ko02026,ko05111,map02020,map02025,map02026,map05111 M00475 ko00000,ko00001,ko00002,ko02022,ko02035,ko02044 Bacteria 1MWGM@1224,2KKNB@206350,2VQ9H@28216,COG2197@1,COG2197@2 NA|NA|NA T PFAM response regulator receiver MAG.C3.5_00026 1165096.ARWF01000001_gene937 1.2e-104 386.3 Nitrosomonadales fliC GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 ko:K02406 ko02020,ko02040,ko04621,ko04626,ko05132,ko05134,map02020,map02040,map04621,map04626,map05132,map05134 ko00000,ko00001,ko02035 Bacteria 1MV1N@1224,2KNKW@206350,2VJTA@28216,COG1344@1,COG1344@2 NA|NA|NA N Bacterial flagellin C-terminal helical region MAG.C3.5_00027 1101195.Meth11DRAFT_1017 1.3e-23 115.9 Nitrosomonadales flaG ko:K06603 ko00000,ko02035 Bacteria 1NH9T@1224,2KN7B@206350,2VWJ2@28216,COG1334@1,COG1334@2 NA|NA|NA N FlaG protein MAG.C3.5_00028 582744.Msip34_0750 4.5e-163 581.6 Nitrosomonadales fliD GO:0001539,GO:0005575,GO:0005576,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588 ko:K02407 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1MUVP@1224,2KKHJ@206350,2VHMK@28216,COG1345@1,COG1345@2 NA|NA|NA N Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end MAG.C3.5_00029 583345.Mmol_0922 8.5e-41 173.3 Nitrosomonadales fliS GO:0001539,GO:0006928,GO:0008150,GO:0009987,GO:0040011,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0097588 ko:K02422 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1MZ3G@1224,2KN3I@206350,2VU2S@28216,COG1516@1,COG1516@2 NA|NA|NA N PFAM flagellar protein FliS MAG.C3.5_00030 582744.Msip34_0752 1.5e-20 105.5 Nitrosomonadales fliT ko:K02423 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1N9EZ@1224,2E53Z@1,2KN9Y@206350,2VWTY@28216,32ZWZ@2 NA|NA|NA N Flagellar protein FliT MAG.C3.5_00031 666681.M301_0999 1.5e-53 216.9 Nitrosomonadales fliK1 ko:K02414 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1N7CY@1224,2KPB6@206350,2WGIW@28216,COG3144@1,COG3144@2 NA|NA|NA N Flagellar hook-length control protein FliK MAG.C3.5_00032 265072.Mfla_1980 9.6e-32 142.5 Nitrosomonadales flhB2 ko:K04061 ko00000,ko02044 Bacteria 1N7F1@1224,2KN3H@206350,2VTYF@28216,COG2257@1,COG2257@2 NA|NA|NA N FlhB HrpN YscU SpaS Family MAG.C3.5_00033 582744.Msip34_0755 2.3e-36 158.3 Nitrosomonadales fliE ko:K02408 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1N6RZ@1224,2KMYP@206350,2VVQF@28216,COG1677@1,COG1677@2 NA|NA|NA N PFAM flagellar hook-basal body complex protein FliE MAG.C3.5_00034 582744.Msip34_0756 1.4e-202 712.6 Nitrosomonadales fliF ko:K02409 ko02040,map02040 ko00000,ko00001,ko02035,ko02044 3.A.6.2,3.A.6.3 Bacteria 1MUQR@1224,2KKKW@206350,2VI9M@28216,COG1766@1,COG1766@2 NA|NA|NA N The M ring may be actively involved in energy transduction MAG.C3.5_00035 1101195.Meth11DRAFT_1558 2.1e-145 521.9 Nitrosomonadales fliG GO:0001539,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006928,GO:0006996,GO:0008150,GO:0009288,GO:0009425,GO:0009987,GO:0016020,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0040011,GO:0042802,GO:0042803,GO:0042995,GO:0043226,GO:0043228,GO:0044085,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0044780,GO:0044781,GO:0046982,GO:0046983,GO:0048870,GO:0051179,GO:0051674,GO:0070925,GO:0071840,GO:0071944,GO:0071973,GO:0071978,GO:0097588 ko:K02410 ko02030,ko02040,map02030,map02040 ko00000,ko00001,ko02035 Bacteria 1MV9X@1224,2KKH9@206350,2VI19@28216,COG1536@1,COG1536@2 NA|NA|NA N TIGRFAM flagellar motor switch protein FliG MAG.C3.5_00036 666681.M301_1004 1.3e-52 213.0 Nitrosomonadales fliH ko:K02411 ko02040,map02040 ko00000,ko00001,ko02035,ko02044 3.A.6.2 Bacteria 1NMQE@1224,2KMPF@206350,2VSQ0@28216,COG1317@1,COG1317@2 NA|NA|NA N PFAM Flagellar assembly protein FliH MAG.C3.5_00037 265072.Mfla_1975 2.5e-208 731.5 Nitrosomonadales fliI GO:0003674,GO:0005488,GO:0005515,GO:0042802 3.6.3.14 ko:K02412 ko02040,map02040 ko00000,ko00001,ko01000,ko02035,ko02044 3.A.6.2,3.A.6.3 Bacteria 1MUH6@1224,2KMB1@206350,2VHQ5@28216,COG1157@1,COG1157@2 NA|NA|NA NU ATPase FliI YscN family MAG.C3.5_00038 582744.Msip34_0760 3.1e-27 128.3 Nitrosomonadales fliJ GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02413 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1N4IX@1224,2KP9D@206350,2VUIK@28216,COG2882@1,COG2882@2 NA|NA|NA N Flagellar FliJ protein MAG.C3.5_00039 666681.M301_1007 1.8e-32 147.1 Nitrosomonadales fliK ko:K02414 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1N7XT@1224,2KN5E@206350,2VU2D@28216,COG3144@1,COG3144@2 NA|NA|NA N PFAM Flagellar hook-length control protein MAG.C3.5_00040 666681.M301_2472 8.6e-23 112.5 Nitrosomonadales Bacteria 1QCTI@1224,2B3T2@1,2KNXY@206350,2W84P@28216,31WGS@2 NA|NA|NA MAG.C3.5_00042 207954.MED92_14048 7.3e-07 60.8 Gammaproteobacteria Bacteria 1P4R3@1224,1SWE5@1236,2DD1C@1,2ZG4U@2 NA|NA|NA MAG.C3.5_00045 582744.Msip34_1576 0.0 1208.4 Nitrosomonadales glnE GO:0000166,GO:0000287,GO:0000820,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006521,GO:0006541,GO:0006542,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0008882,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0010565,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0019222,GO:0019752,GO:0030554,GO:0031323,GO:0032553,GO:0032555,GO:0032559,GO:0033238,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0050789,GO:0050794,GO:0051171,GO:0062012,GO:0065007,GO:0070566,GO:0071704,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.42,2.7.7.89 ko:K00982 ko00000,ko01000 Bacteria 1MU4I@1224,2KKKX@206350,2VH5B@28216,COG1391@1,COG1391@2 NA|NA|NA OT Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell MAG.C3.5_00047 498211.CJA_1597 2.8e-55 221.5 Cellvibrio Bacteria 1FI97@10,1RFE8@1224,1S7AB@1236,29A26@1,2ZX3K@2 NA|NA|NA MAG.C3.5_00048 1387312.BAUS01000011_gene1877 9.1e-40 169.5 Betaproteobacteria gluP ko:K02429 ko00000,ko02000 2.A.1.7 Bacteria 1MXDC@1224,2VN8R@28216,COG0738@1,COG0738@2 NA|NA|NA G glucose galactose transporter MAG.C3.5_00055 666681.M301_1238 3.5e-86 325.1 Nitrosomonadales rgpB ko:K12991,ko:K12997 ko00000,ko01000,ko01003,ko01005 GT2 Bacteria 1R132@1224,2KNDT@206350,2VT3B@28216,COG1216@1,COG1216@2 NA|NA|NA S Glycosyltransferase like family 2 MAG.C3.5_00056 886882.PPSC2_c4822 2e-49 203.0 Paenibacillaceae rgpB ko:K12991,ko:K12997 ko00000,ko01000,ko01003,ko01005 GT2 Bacteria 1V49N@1239,26WEX@186822,4ISDQ@91061,COG1216@1,COG1216@2 NA|NA|NA S involved in cell wall biogenesis MAG.C3.5_00057 743721.Psesu_2457 4.6e-107 395.2 Xanthomonadales Bacteria 1PKJV@1224,1RW7J@1236,1XAHP@135614,COG1442@1,COG1442@2 NA|NA|NA M glycosyl transferase family 8 MAG.C3.5_00058 99598.Cal7507_5299 6e-83 314.3 Bacteria ko:K15257 ko00000,ko01000,ko03016 Bacteria COG0742@1,COG0742@2 NA|NA|NA L rRNA (guanine-N2-)-methyltransferase activity MAG.C3.5_00059 87626.PTD2_12104 2.3e-54 219.9 Pseudoalteromonadaceae hemG 1.3.3.15,1.3.3.4,1.4.3.4 ko:K00231,ko:K00274 ko00260,ko00330,ko00340,ko00350,ko00360,ko00380,ko00860,ko00950,ko00982,ko01100,ko01110,ko04726,ko04728,ko05030,ko05031,ko05034,map00260,map00330,map00340,map00350,map00360,map00380,map00860,map00950,map00982,map01100,map01110,map04726,map04728,map05030,map05031,map05034 M00121,M00135 R02173,R02382,R02529,R02532,R02613,R02908,R02919,R03222,R04025,R04178,R04300,R04674,R04890,R04893,R04894,R04907,R04908,R08346,R08347,R08348,R11354 RC00062,RC00160,RC00225,RC00676,RC00807,RC00808,RC00885,RC01808,RC02226,RC02713 ko00000,ko00001,ko00002,ko01000 Bacteria 1R6WP@1224,1RZRE@1236,2Q2VG@267888,COG1232@1,COG1232@2 NA|NA|NA H NAD(P)-binding Rossmann-like domain MAG.C3.5_00060 309803.CTN_1920 1.5e-23 116.3 Thermotogae 2.3.1.30 ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 M00021 R00586 RC00004,RC00041 ko00000,ko00001,ko00002,ko01000 Bacteria 2GCY7@200918,COG1045@1,COG1045@2 NA|NA|NA E Serine acetyltransferase MAG.C3.5_00063 583345.Mmol_0780 2.5e-51 208.8 Nitrosomonadales ko:K07684 ko02020,map02020 M00471 ko00000,ko00001,ko00002,ko02022 Bacteria 1N8MU@1224,2KMXU@206350,2VV2P@28216,COG2197@1,COG2197@2 NA|NA|NA K PFAM regulatory protein LuxR MAG.C3.5_00064 666681.M301_0714 2.4e-179 635.2 Nitrosomonadales lapC ko:K02022,ko:K12542 M00330 ko00000,ko00002,ko02000,ko02044 3.A.1.109.4,8.A.1 Bacteria 1MUI8@1224,2KKH6@206350,2VIAA@28216,COG0845@1,COG0845@2 NA|NA|NA M TIGRFAM type I secretion membrane fusion protein, HlyD family MAG.C3.5_00065 582744.Msip34_1008 5.5e-300 1036.6 Nitrosomonadales lapB ko:K12541 ko02010,map02010 M00330 ko00000,ko00001,ko00002,ko02000,ko02044 3.A.1.109.3,3.A.1.109.4 Bacteria 1R2T0@1224,2KMDW@206350,2VP2B@28216,COG2274@1,COG2274@2 NA|NA|NA V TIGRFAM type I secretion system ATPase MAG.C3.5_00066 1101195.Meth11DRAFT_1892 1e-278 965.7 Nitrosomonadales ppc GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0008964,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0055114,GO:0071704,GO:0072350 4.1.1.31 ko:K01595 ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200 M00168,M00170,M00171,M00172,M00173,M00346,M00374 R00345 RC02741 ko00000,ko00001,ko00002,ko01000 iJN678.ppc,iSFV_1184.SFV_4025 Bacteria 1MUD5@1224,2KM6K@206350,2VI9F@28216,COG2352@1,COG2352@2 NA|NA|NA C Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle MAG.C3.5_00067 1132855.KB913035_gene1694 9.6e-131 473.8 Betaproteobacteria ko:K07192 ko04910,map04910 ko00000,ko00001,ko03036,ko04131,ko04147 Bacteria 1P39U@1224,2VMEW@28216,COG2268@1,COG2268@2 NA|NA|NA S prohibitin homologues MAG.C3.5_00068 1165096.ARWF01000001_gene987 6.4e-88 330.5 Nitrosomonadales Bacteria 1RHYX@1224,2KKW7@206350,2VR0S@28216,COG1028@1,COG1028@2 NA|NA|NA IQ PFAM short-chain dehydrogenase reductase SDR MAG.C3.5_00069 1095769.CAHF01000025_gene758 5.6e-180 637.5 Betaproteobacteria 2.7.7.65 ko:K02488 ko02020,ko04112,map02020,map04112 M00511 R08057 ko00000,ko00001,ko00002,ko01000,ko02022 Bacteria 1MVWM@1224,2VK4W@28216,COG2199@1,COG3706@2 NA|NA|NA T response regulator MAG.C3.5_00070 886293.Sinac_5835 1.7e-127 463.0 Planctomycetes ko:K03305 ko00000 2.A.17 Bacteria 2IYIT@203682,COG3104@1,COG3104@2 NA|NA|NA E COG3104 Dipeptide tripeptide permease MAG.C3.5_00072 582744.Msip34_2014 1.5e-181 642.1 Nitrosomonadales ychF GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030234,GO:0043021,GO:0043022,GO:0043023,GO:0043086,GO:0044092,GO:0044424,GO:0044464,GO:0044877,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0098772 ko:K06942 ko00000,ko03009 Bacteria 1MVM4@1224,2KKW0@206350,2VJ1W@28216,COG0012@1,COG0012@2 NA|NA|NA J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner MAG.C3.5_00074 580332.Slit_1829 1.3e-18 100.5 Nitrosomonadales Bacteria 1PXFZ@1224,2BGQG@1,2WCW7@28216,32APG@2,44WJ8@713636 NA|NA|NA MAG.C3.5_00075 582744.Msip34_1026 9.5e-215 753.1 Nitrosomonadales gspE ko:K02454,ko:K02652 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02035,ko02044 3.A.15,3.A.15.2 Bacteria 1MU7V@1224,2KKM2@206350,2VHQ1@28216,COG2804@1,COG2804@2 NA|NA|NA NU PFAM type II secretion system MAG.C3.5_00076 582744.Msip34_1025 8.7e-130 470.3 Nitrosomonadales pilC ko:K02455,ko:K02653 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02035,ko02044 3.A.15,3.A.15.2 Bacteria 1N8FA@1224,2KMAF@206350,2VJ0W@28216,COG1459@1,COG1459@2 NA|NA|NA NU PFAM type II secretion system MAG.C3.5_00077 582744.Msip34_1024 5.3e-57 227.3 Nitrosomonadales gspG2 ko:K02246,ko:K02456 ko03070,ko05111,map03070,map05111 M00331,M00429 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1RDX2@1224,2KMQV@206350,2VR66@28216,COG2165@1,COG2165@2 NA|NA|NA U type II secretion system protein G MAG.C3.5_00078 582744.Msip34_2437 0.0 1108.6 Nitrosomonadales Bacteria 1MU2C@1224,2KNJ1@206350,2VH3V@28216,COG5001@1,COG5001@2,COG5002@1,COG5002@2 NA|NA|NA T PFAM EAL domain protein MAG.C3.5_00079 278957.ABEA03000099_gene872 1e-42 180.6 Opitutae 5.2.1.8 ko:K01802,ko:K03769 ko00000,ko01000,ko03110 Bacteria 3K8ZT@414999,46XKD@74201,COG0760@1,COG0760@2 NA|NA|NA O PPIC-type PPIASE domain MAG.C3.5_00080 666681.M301_1485 5.5e-127 460.7 Nitrosomonadales miaA GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006417,GO:0006725,GO:0006807,GO:0006950,GO:0008033,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009451,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016070,GO:0016740,GO:0016765,GO:0019222,GO:0031323,GO:0031326,GO:0032268,GO:0033554,GO:0034248,GO:0034470,GO:0034605,GO:0034641,GO:0034660,GO:0040007,GO:0043170,GO:0043412,GO:0043555,GO:0044237,GO:0044238,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051246,GO:0051716,GO:0052381,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1990497,GO:2000112,GO:2000765 2.5.1.75 ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 R01122 RC02820 ko00000,ko00001,ko01000,ko01006,ko03016 Bacteria 1MUB2@1224,2KKC6@206350,2VHEP@28216,COG0324@1,COG0324@2 NA|NA|NA J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) MAG.C3.5_00082 1101195.Meth11DRAFT_1320 1.1e-161 576.2 Nitrosomonadales mutL GO:0000018,GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0032300,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051716,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1990391 ko:K03572 ko03430,map03430 ko00000,ko00001,ko03400 Bacteria 1MV61@1224,2KKUB@206350,2VIBW@28216,COG0323@1,COG0323@2 NA|NA|NA L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex MAG.C3.5_00083 582744.Msip34_2164 5.7e-94 350.5 Nitrosomonadales pcnB GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004652,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006276,GO:0006378,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0031123,GO:0031124,GO:0034641,GO:0043170,GO:0043412,GO:0043631,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070566,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 2.7.7.19,2.7.7.72 ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 R09382,R09383,R09384,R09386 RC00078 ko00000,ko00001,ko01000,ko03016,ko03019 Bacteria 1MVCS@1224,2KKUQ@206350,2VHY5@28216,COG0617@1,COG0617@2 NA|NA|NA J Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control MAG.C3.5_00084 582744.Msip34_2165 1.7e-63 248.8 Nitrosomonadales folK GO:0000287,GO:0003674,GO:0003824,GO:0003848,GO:0005488,GO:0016740,GO:0016772,GO:0016778,GO:0043167,GO:0043169,GO:0046872 2.7.6.3,4.1.2.25 ko:K00950,ko:K13940 ko00790,ko01100,map00790,map01100 M00126,M00841 R03503,R03504 RC00002,RC00017,RC00721,RC00943 ko00000,ko00001,ko00002,ko01000 iECDH1ME8569_1439.ECDH1ME8569_0136,iEcDH1_1363.EcDH1_3460,iJN746.PP_4698,iSBO_1134.SBO_0131 Bacteria 1MZH8@1224,2KN0P@206350,2VSE2@28216,COG0801@1,COG0801@2 NA|NA|NA H PFAM 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MAG.C3.5_00085 582744.Msip34_2166 2.2e-95 355.1 Nitrosomonadales dgk 2.7.1.113 ko:K15518 ko00230,map00230 R01967 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 1RC50@1224,2KMBR@206350,2VQ8U@28216,COG1428@1,COG1428@2 NA|NA|NA F PFAM deoxynucleoside kinase MAG.C3.5_00086 582744.Msip34_2167 1.1e-104 386.3 Nitrosomonadales panB 2.1.2.11 ko:K00606 ko00770,ko01100,ko01110,map00770,map01100,map01110 M00119 R01226 RC00022,RC00200 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU3B@1224,2KKFU@206350,2VHZ0@28216,COG0413@1,COG0413@2 NA|NA|NA H Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate MAG.C3.5_00087 582744.Msip34_2168 1.1e-102 379.8 Nitrosomonadales panC GO:0003674,GO:0003824,GO:0004592,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 ko:K01918 ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110 M00119 R02473 RC00096,RC00141 ko00000,ko00001,ko00002,ko01000 iECH74115_1262.ECH74115_0142,iECSP_1301.ECSP_0134,iECs_1301.ECs0137,iG2583_1286.G2583_0137,iZ_1308.Z0144 Bacteria 1MV1S@1224,2KKN9@206350,2VHF1@28216,COG0414@1,COG0414@2 NA|NA|NA H Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate MAG.C3.5_00088 582744.Msip34_2173 1.9e-57 228.4 Nitrosomonadales panD GO:0003674,GO:0003824,GO:0004068,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006508,GO:0006520,GO:0006522,GO:0006523,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009078,GO:0009079,GO:0009108,GO:0009110,GO:0009987,GO:0010467,GO:0015939,GO:0015940,GO:0016053,GO:0016485,GO:0016540,GO:0016829,GO:0016830,GO:0016831,GO:0019538,GO:0019752,GO:0030312,GO:0032787,GO:0034641,GO:0042364,GO:0042398,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0071944,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.11 ko:K01579 ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110 M00119 R00489 RC00299 ko00000,ko00001,ko00002,ko01000 iECP_1309.ECP_0139,iYL1228.KPN_00139 Bacteria 1RI1B@1224,2KMU9@206350,2VSDU@28216,COG0853@1,COG0853@2 NA|NA|NA H Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine MAG.C3.5_00089 1236959.BAMT01000004_gene759 6.9e-46 189.9 Nitrosomonadales rsfS GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006417,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043023,GO:0044087,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:0090069,GO:0090071,GO:2000112,GO:2000113 2.7.7.18 ko:K00969,ko:K09710 ko00760,ko01100,map00760,map01100 M00115 R00137,R03005 RC00002 ko00000,ko00001,ko00002,ko01000,ko03009 Bacteria 1MZEF@1224,2KMSE@206350,2VRRV@28216,COG0799@1,COG0799@2 NA|NA|NA J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation MAG.C3.5_00090 3988.XP_002535378.1 1.5e-46 192.2 fabids Viridiplantae 37HKS@33090,3G7MY@35493,4JJ7G@91835,COG2217@1,KOG0207@2759 NA|NA|NA P Copper-transporting ATPase MAG.C3.5_00091 1132855.KB913035_gene1511 3.3e-44 184.5 Nitrosomonadales cueR ko:K19591,ko:K19592 M00768,M00769 ko00000,ko00002,ko01504,ko03000 Bacteria 1RGX6@1224,2KP18@206350,2VSD1@28216,COG0789@1,COG0789@2 NA|NA|NA K MerR, DNA binding MAG.C3.5_00093 1101195.Meth11DRAFT_1949 3e-22 110.9 Nitrosomonadales Bacteria 1PJIW@1224,2A8M8@1,2KN7S@206350,2W80P@28216,30XPN@2 NA|NA|NA MAG.C3.5_00095 1502770.JQMG01000001_gene676 0.0 1214.5 Nitrosomonadales pepN GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0008270,GO:0009056,GO:0009987,GO:0016020,GO:0016787,GO:0019538,GO:0033218,GO:0034641,GO:0042277,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0070006,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.11.2 ko:K01256 ko00480,ko01100,map00480,map01100 R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 iECIAI1_1343.ECIAI1_0973,iECO103_1326.ECO103_0977,iECP_1309.ECP_0944,iECSE_1348.ECSE_0993,iECW_1372.ECW_m1042,iEKO11_1354.EKO11_2898,iWFL_1372.ECW_m1042 Bacteria 1MUCI@1224,2KM7H@206350,2VJ68@28216,COG0308@1,COG0308@2 NA|NA|NA E Domain of unknown function (DUF3458_C) ARM repeats MAG.C3.5_00096 265072.Mfla_0871 4.5e-19 100.9 Nitrosomonadales Bacteria 1NNI2@1224,2DQZQ@1,2KN9M@206350,2W5R6@28216,339JR@2 NA|NA|NA MAG.C3.5_00097 582744.Msip34_0436 1.1e-277 962.2 Nitrosomonadales fhuE ko:K16088 ko00000,ko02000 1.B.14.1.10,1.B.14.1.3,1.B.14.1.8 Bacteria 1MW5E@1224,2KM5W@206350,2VHUH@28216,COG4773@1,COG4773@2 NA|NA|NA P TonB dependent receptor MAG.C3.5_00098 472759.Nhal_1793 5.8e-126 457.6 Chromatiales Bacteria 1MW2S@1224,1RZFD@1236,1X1JZ@135613,COG3182@1,COG3182@2 NA|NA|NA S PepSY-associated TM region MAG.C3.5_00100 265072.Mfla_0875 1.2e-17 95.5 Nitrosomonadales Bacteria 1PJKI@1224,2BUMP@1,2KNC4@206350,2W81Q@28216,32PYD@2 NA|NA|NA MAG.C3.5_00101 666681.M301_2530 3.5e-26 125.6 Nitrosomonadales tonB1 ko:K03832 ko00000,ko02000 2.C.1.1 Bacteria 1MZPX@1224,2KMXT@206350,2VM32@28216,COG0810@1,COG0810@2 NA|NA|NA M Gram-negative bacterial TonB protein C-terminal MAG.C3.5_00102 582744.Msip34_1760 2.9e-62 245.4 Nitrosomonadales exbB ko:K03561,ko:K03562 ko01120,map01120 ko00000,ko02000 1.A.30.2.1,1.A.30.2.2 Bacteria 1NMPB@1224,2KMAX@206350,2VJ4U@28216,COG0811@1,COG0811@2 NA|NA|NA U PFAM MotA TolQ ExbB proton channel MAG.C3.5_00103 583345.Mmol_2106 5.8e-52 210.3 Nitrosomonadales exbD1 ko:K03559,ko:K03560 ko00000,ko02000 1.A.30.2.1,1.A.30.2.2 Bacteria 1MZ6M@1224,2KN0J@206350,2VSVW@28216,COG0848@1,COG0848@2 NA|NA|NA U PFAM Biopolymer transport protein ExbD TolR MAG.C3.5_00104 1116472.MGMO_103c00250 1.9e-210 739.2 Methylococcales fiu GO:0005575,GO:0005623,GO:0006810,GO:0008150,GO:0009279,GO:0015688,GO:0015833,GO:0015891,GO:0015893,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0042221,GO:0042493,GO:0042884,GO:0042886,GO:0042891,GO:0044462,GO:0044464,GO:0050896,GO:0051179,GO:0051181,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:1901678 ko:K16090 ko00000,ko02000 1.B.14.1.11 iLF82_1304.LF82_0668,iNRG857_1313.NRG857_03600,iYL1228.KPN_01250 Bacteria 1MV0X@1224,1RN3C@1236,1XE82@135618,COG4774@1,COG4774@2 NA|NA|NA P PFAM TonB-dependent Receptor MAG.C3.5_00105 1116472.MGMO_103c00260 2.8e-64 251.9 Methylococcales piuC ko:K07336 ko00000,ko01000 Bacteria 1MUI7@1224,1RQ0M@1236,1XGDN@135618,COG3128@1,COG3128@2 NA|NA|NA C Prolyl 4-hydroxylase alpha subunit homologues. MAG.C3.5_00106 582744.Msip34_1052 3e-71 275.0 Nitrosomonadales ko:K09939 ko00000 Bacteria 1RF14@1224,2KNJ4@206350,2VSCE@28216,COG3295@1,COG3295@2 NA|NA|NA S Putative PepSY_TM-like MAG.C3.5_00107 582744.Msip34_1222 6.1e-149 534.3 Nitrosomonadales Bacteria 1MWX5@1224,2KKUR@206350,2VHU4@28216,COG1538@1,COG1538@2 NA|NA|NA MU CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) MAG.C3.5_00108 582744.Msip34_1221 2.5e-132 478.8 Nitrosomonadales macA_1 ko:K02005,ko:K13888 M00709 ko00000,ko00002,ko02000 8.A.1 Bacteria 1MU8D@1224,2KMH1@206350,2VH9K@28216,COG0845@1,COG0845@2 NA|NA|NA M Biotin-lipoyl like MAG.C3.5_00109 583345.Mmol_2102 1.4e-98 365.9 Nitrosomonadales macB ko:K02003 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1MU45@1224,2KM1C@206350,2VKEW@28216,COG1136@1,COG1136@2 NA|NA|NA V PFAM ABC transporter MAG.C3.5_00110 1132855.KB913035_gene463 1.2e-171 609.4 Nitrosomonadales salY ko:K02004,ko:K05685 ko02010,map02010 M00258,M00709 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1,3.A.1.122.1,3.A.1.122.12 Bacteria 1PBKH@1224,2KKHY@206350,2W3RM@28216,COG0577@1,COG0577@2 NA|NA|NA V MacB-like periplasmic core domain MAG.C3.5_00112 582744.Msip34_1738 2.5e-193 681.8 Nitrosomonadales srmB GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003725,GO:0003727,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008104,GO:0008143,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0033036,GO:0033592,GO:0034622,GO:0034641,GO:0035770,GO:0036464,GO:0042254,GO:0042255,GO:0042273,GO:0042623,GO:0043170,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0046483,GO:0051179,GO:0060293,GO:0065003,GO:0070035,GO:0070717,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097617,GO:0140098,GO:1901360,GO:1901363,GO:1990904 3.6.4.13 ko:K05590,ko:K11927 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 Bacteria 1MU49@1224,2KM5U@206350,2VH16@28216,COG0513@1,COG0513@2 NA|NA|NA L Belongs to the DEAD box helicase family MAG.C3.5_00113 1236959.BAMT01000009_gene3414 6.7e-182 643.7 Nitrosomonadales rhlE2 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 ko:K11927 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Bacteria 1MU49@1224,2KM0R@206350,2VH16@28216,COG0513@1,COG0513@2 NA|NA|NA L Belongs to the DEAD box helicase family MAG.C3.5_00114 582744.Msip34_1740 9.2e-61 239.6 Nitrosomonadales yjbI ko:K06886 ko00000 Bacteria 1RH21@1224,2KMSJ@206350,2VSUJ@28216,COG2346@1,COG2346@2 NA|NA|NA S Bacterial-like globin MAG.C3.5_00115 666681.M301_1623 1.6e-187 662.1 Nitrosomonadales purT GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008776,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016741,GO:0016742,GO:0016772,GO:0016774,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.2.2 ko:K08289 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 M00048 R04325,R04326 RC00026,RC00197,RC01128 ko00000,ko00001,ko00002,ko01000 iSDY_1059.SDY_1135 Bacteria 1N3KA@1224,2KKHD@206350,2VH4M@28216,COG0027@1,COG0027@2 NA|NA|NA F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate MAG.C3.5_00116 1236959.BAMT01000009_gene3411 2.3e-190 671.8 Nitrosomonadales atoC ko:K02481,ko:K07714 ko02020,map02020 M00500 ko00000,ko00001,ko00002,ko02022 Bacteria 1MU0N@1224,2KKCP@206350,2VPRI@28216,COG2204@1,COG2204@2 NA|NA|NA T PFAM sigma-54 factor interaction domain-containing protein MAG.C3.5_00117 666681.M301_1625 0.0 1165.6 Betaproteobacteria ko:K02014 ko00000,ko02000 1.B.14 Bacteria 1QUWU@1224,2WGQG@28216,COG4206@1,COG4206@2 NA|NA|NA H TonB dependent receptor MAG.C3.5_00118 582744.Msip34_1743 3.1e-240 838.2 Nitrosomonadales ko:K02014 ko00000,ko02000 1.B.14 Bacteria 1MXJU@1224,2KKMQ@206350,2VN9X@28216,COG4772@1,COG4772@2 NA|NA|NA P TonB dependent receptor MAG.C3.5_00119 1122236.KB905145_gene2420 2.4e-246 858.6 Nitrosomonadales ybbP GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1MU9R@1224,2KKIP@206350,2VHHQ@28216,COG3127@1,COG3127@2 NA|NA|NA Q FtsX-like permease family MAG.C3.5_00120 265072.Mfla_1251 1.2e-78 299.7 Nitrosomonadales ybbA GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K02003 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1MXG9@1224,2KKGV@206350,2VI54@28216,COG4181@1,COG4181@2 NA|NA|NA Q PFAM ABC transporter MAG.C3.5_00121 1122236.KB905145_gene2422 2.5e-59 235.3 Nitrosomonadales tesA 3.1.1.5 ko:K10804 ko01040,map01040 ko00000,ko00001,ko01000,ko01004 Bacteria 1RCXZ@1224,2KMTJ@206350,2VRIQ@28216,COG2755@1,COG2755@2 NA|NA|NA E PFAM lipolytic protein G-D-S-L family MAG.C3.5_00122 583345.Mmol_1287 5.1e-118 431.4 Nitrosomonadales tilS GO:0002097,GO:0002101,GO:0002136,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016879,GO:0032267,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 6.3.4.19 ko:K04075,ko:K14058 R09597 RC02633,RC02634 ko00000,ko01000,ko03016 Bacteria 1MU85@1224,2KMEJ@206350,2VP12@28216,COG0037@1,COG0037@2 NA|NA|NA D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine MAG.C3.5_00123 1236959.BAMT01000009_gene3402 4e-157 560.8 Nitrosomonadales accA GO:0001676,GO:0003674,GO:0003824,GO:0003989,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009317,GO:0009329,GO:0009987,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0019752,GO:0032787,GO:0032991,GO:0042759,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576,GO:1902494,GO:1990234 2.1.3.15,6.4.1.2 ko:K01962,ko:K01963 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04386 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 iAF1260.b0185,iBWG_1329.BWG_0177,iEC55989_1330.EC55989_0179,iECDH10B_1368.ECDH10B_0165,iECDH1ME8569_1439.ECDH1ME8569_0178,iECED1_1282.ECED1_0191,iECH74115_1262.ECH74115_0195,iECIAI1_1343.ECIAI1_0185,iECNA114_1301.ECNA114_0175,iECO111_1330.ECO111_0186,iECO26_1355.ECO26_0187,iECP_1309.ECP_0193,iECSE_1348.ECSE_0184,iECSF_1327.ECSF_0200,iECSP_1301.ECSP_0184,iECW_1372.ECW_m0181,iECs_1301.ECs0187,iEKO11_1354.EKO11_3733,iEcDH1_1363.EcDH1_3418,iEcE24377_1341.EcE24377A_0189,iEcHS_1320.EcHS_A0187,iG2583_1286.G2583_0188,iJN746.PP_1607,iJO1366.b0185,iJR904.b0185,iLF82_1304.LF82_0008,iNRG857_1313.NRG857_00945,iSDY_1059.SDY_0201,iSFV_1184.SFV_0168,iSF_1195.SF0175,iSFxv_1172.SFxv_0185,iS_1188.S0178,iUMNK88_1353.UMNK88_190,iWFL_1372.ECW_m0181,iY75_1357.Y75_RS00935,iZ_1308.Z0197 Bacteria 1MURN@1224,2KKTB@206350,2VHS0@28216,COG0825@1,COG0825@2 NA|NA|NA I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA MAG.C3.5_00124 582744.Msip34_1749 0.0 1942.2 Nitrosomonadales dnaE GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032991,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0046483,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1MUIF@1224,2KKIM@206350,2VH3F@28216,COG0587@1,COG0587@2 NA|NA|NA L DNA polymerase III alpha subunit MAG.C3.5_00125 666681.M301_1634 0.0 1654.0 Nitrosomonadales pilL ko:K02487,ko:K06596,ko:K11526 ko02020,ko02025,map02020,map02025 M00507,M00508 ko00000,ko00001,ko00002,ko01001,ko02022,ko02035 Bacteria 1MUAG@1224,2KKGJ@206350,2VJSZ@28216,COG0643@1,COG0643@2,COG0745@1,COG0745@2,COG2198@1,COG2198@2 NA|NA|NA T response regulator receiver MAG.C3.5_00126 1132855.KB913035_gene1281 1.1e-149 537.0 Nitrosomonadales pilJ ko:K02660 ko02020,ko02025,map02020,map02025 ko00000,ko00001,ko02035,ko02044 Bacteria 1MU9B@1224,2KKEZ@206350,2VJBX@28216,COG0840@1,COG0840@2 NA|NA|NA NT PFAM chemotaxis sensory transducer MAG.C3.5_00127 666681.M301_1636 4.8e-40 171.0 Nitrosomonadales pilI ko:K02659,ko:K03408 ko02020,ko02025,ko02030,map02020,map02025,map02030 ko00000,ko00001,ko02035,ko02044 Bacteria 1N07Q@1224,2KN3R@206350,2VU6N@28216,COG0835@1,COG0835@2 NA|NA|NA NT PFAM CheW domain protein MAG.C3.5_00128 1132855.KB913035_gene1279 1.7e-39 168.7 Nitrosomonadales ko:K02658,ko:K11443 ko02020,ko02025,ko04112,map02020,map02025,map04112 M00507,M00511 ko00000,ko00001,ko00002,ko02022,ko02035,ko02044 Bacteria 1R133@1224,2KN3M@206350,2WHYY@28216,COG0784@1,COG0784@2 NA|NA|NA T Pfam Response regulator receiver MAG.C3.5_00129 1165096.ARWF01000001_gene48 3.5e-54 217.6 Nitrosomonadales Bacteria 1RDYB@1224,2KMW5@206350,2VR2Q@28216,COG0745@1,COG0745@2 NA|NA|NA T PFAM response regulator receiver MAG.C3.5_00130 1165096.ARWF01000001_gene47 1.9e-182 645.2 Nitrosomonadales Bacteria 1QUQH@1224,2KKQ2@206350,2VMN2@28216,COG3287@1,COG3287@2 NA|NA|NA S FIST N domain MAG.C3.5_00131 666681.M301_1640 5.3e-68 263.8 Nitrosomonadales tpx GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009405,GO:0009605,GO:0009607,GO:0009636,GO:0009987,GO:0015036,GO:0016209,GO:0016491,GO:0016667,GO:0016684,GO:0019725,GO:0020012,GO:0030312,GO:0030682,GO:0042221,GO:0042592,GO:0043207,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0051920,GO:0052060,GO:0052173,GO:0052200,GO:0052376,GO:0052551,GO:0052564,GO:0052565,GO:0052572,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071944,GO:0075136,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 ko:K11065 ko00000,ko01000 Bacteria 1RAJ9@1224,2KKC2@206350,2VQ18@28216,COG2077@1,COG2077@2 NA|NA|NA O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides MAG.C3.5_00132 265072.Mfla_1237 1.6e-42 178.7 Nitrosomonadales Bacteria 1N02D@1224,2KMX2@206350,2VU39@28216,COG1694@1,COG1694@2 NA|NA|NA S MazG-like family MAG.C3.5_00133 582744.Msip34_0894 3.5e-179 634.4 Nitrosomonadales rlmL GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0008990,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016423,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.173,2.1.1.264 ko:K07444,ko:K12297 R07234 RC00003 ko00000,ko01000,ko03009 Bacteria 1MUQM@1224,2KMAY@206350,2VHMY@28216,COG0116@1,COG0116@2 NA|NA|NA L Belongs to the methyltransferase superfamily MAG.C3.5_00134 265072.Mfla_1235 2.4e-102 378.6 Nitrosomonadales 2.5.1.16 ko:K00797 ko00270,ko00330,ko00410,ko00480,ko01100,map00270,map00330,map00410,map00480,map01100 M00034,M00133 R01920,R02869,R08359 RC00021,RC00053 ko00000,ko00001,ko00002,ko01000 Bacteria 1RBWW@1224,2KMEK@206350,2VK7S@28216,COG0421@1,COG0421@2 NA|NA|NA E Spermine/spermidine synthase domain MAG.C3.5_00135 582744.Msip34_0892 2.4e-124 451.8 Nitrosomonadales rnb GO:0000175,GO:0000178,GO:0000932,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0019439,GO:0022613,GO:0032991,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0035770,GO:0036464,GO:0042254,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1902494,GO:1905354,GO:1990904 3.1.13.1 ko:K01147 ko00000,ko01000,ko03016 Bacteria 1NGSQ@1224,2KMC0@206350,2VHMM@28216,COG0557@1,COG0557@2 NA|NA|NA K RNB MAG.C3.5_00136 1165096.ARWF01000001_gene1631 1.1e-171 609.4 Nitrosomonadales hemE GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019353,GO:0019438,GO:0019752,GO:0033013,GO:0033014,GO:0033526,GO:0034641,GO:0042168,GO:0042440,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 4.1.1.37 ko:K01599 ko00860,ko01100,ko01110,map00860,map01100,map01110 M00121 R03197,R04972 RC00872 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUG1@1224,2KM65@206350,2VHC2@28216,COG0407@1,COG0407@2 NA|NA|NA H Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III MAG.C3.5_00137 582744.Msip34_2804 5.9e-158 563.5 Nitrosomonadales gltD 1.4.1.13,1.4.1.14 ko:K00266 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 R00093,R00114,R00248 RC00006,RC00010,RC02799 ko00000,ko00001,ko01000 iJN678.gltD,iSB619.SA_RS02450 Bacteria 1MU2H@1224,2KKRV@206350,2VIHR@28216,COG0493@1,COG0493@2 NA|NA|NA E TIGRFAM glutamate synthase, NADH NADPH, small subunit MAG.C3.5_00138 582744.Msip34_0567 5.9e-115 420.6 Nitrosomonadales bioC GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008757,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0010340,GO:0016053,GO:0016740,GO:0016741,GO:0016787,GO:0016788,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032259,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0052689,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.197 ko:K02169 ko00780,ko01100,map00780,map01100 M00572 R09543 RC00003,RC00460 ko00000,ko00001,ko00002,ko01000 iECP_1309.ECP_0791,iSBO_1134.SBO_0664,iSFV_1184.SFV_0760,iSF_1195.SF0727,iSFxv_1172.SFxv_0792,iSSON_1240.SSON_0756,iS_1188.S0768,iSbBS512_1146.SbBS512_E2575 Bacteria 1PA5F@1224,2KM9I@206350,2VJP9@28216,COG0500@1,COG2226@2 NA|NA|NA H Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway MAG.C3.5_00139 582744.Msip34_0566 5.5e-112 410.6 Nitrosomonadales bioH 2.1.1.197,3.1.1.85 ko:K02169,ko:K02170 ko00780,ko01100,map00780,map01100 M00572 R09543,R09725 RC00003,RC00460,RC00461 ko00000,ko00001,ko00002,ko01000 Bacteria 1N2R9@1224,2KKDF@206350,2VRME@28216,COG2267@1,COG2267@2 NA|NA|NA I The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters MAG.C3.5_00140 582744.Msip34_0380 4.2e-99 367.5 Nitrosomonadales purD GO:0000166,GO:0003674,GO:0003824,GO:0004637,GO:0005488,GO:0005524,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.4.13 ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04144 RC00090,RC00166 ko00000,ko00001,ko00002,ko01000 iECNA114_1301.ECNA114_3417,iECSF_1327.ECSF_3859,iJN746.PP_4823,iPC815.YPO3729 Bacteria 1MUAH@1224,2KKHI@206350,2VH9J@28216,COG0151@1,COG0151@2 NA|NA|NA F Belongs to the GARS family MAG.C3.5_00141 582744.Msip34_0379 7.3e-63 246.9 Nitrosomonadales tsaC GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061710,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.7.87 ko:K07479,ko:K07566 R10463 RC00745 ko00000,ko01000,ko03009,ko03016 Bacteria 1MVPM@1224,2KKJM@206350,2VIFT@28216,COG0009@1,COG0009@2 NA|NA|NA J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine MAG.C3.5_00142 1236959.BAMT01000011_gene3192 6e-155 553.5 Nitrosomonadales hemF GO:0003674,GO:0003824,GO:0004109,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0016634,GO:0018130,GO:0019438,GO:0030145,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0046872,GO:0046906,GO:0046914,GO:0046983,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.3.3.3 ko:K00228 ko00860,ko01100,ko01110,map00860,map01100,map01110 M00121 R03220 RC00884 ko00000,ko00001,ko00002,ko01000 iAF1260.b2436,iBWG_1329.BWG_2198,iECDH10B_1368.ECDH10B_2601,iECDH1ME8569_1439.ECDH1ME8569_2370,iETEC_1333.ETEC_2549,iEcDH1_1363.EcDH1_1225,iEcHS_1320.EcHS_A2573,iEcolC_1368.EcolC_1243,iJO1366.b2436,iJR904.b2436,iY75_1357.Y75_RS12760 Bacteria 1MWMF@1224,2KKQ4@206350,2VIN4@28216,COG0408@1,COG0408@2 NA|NA|NA H Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX MAG.C3.5_00143 697282.Mettu_3556 1.8e-190 672.2 Methylococcales ko:K03294 ko00000 2.A.3.2 Bacteria 1MXNJ@1224,1RMKV@1236,1XE0I@135618,COG0531@1,COG0531@2 NA|NA|NA E Amino acid permease MAG.C3.5_00144 582744.Msip34_0374 5e-43 180.3 Nitrosomonadales ko:K08738 ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416 M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002 3.D.4.6 Bacteria 1N6UN@1224,2KMZ0@206350,2VW1Y@28216,COG4654@1,COG4654@2 NA|NA|NA C PFAM cytochrome c, class I MAG.C3.5_00145 1123487.KB892835_gene3484 7.1e-161 573.9 Rhodocyclales Bacteria 1MVK3@1224,2KVDZ@206389,2VH7S@28216,COG0397@1,COG0397@2 NA|NA|NA S Belongs to the UPF0061 (SELO) family MAG.C3.5_00146 582744.Msip34_1549 4.6e-50 205.7 Nitrosomonadales fimV ko:K07288,ko:K08086 ko00000 Bacteria 1MXV7@1224,2KMD2@206350,2VHX1@28216,COG3170@1,COG3170@2 NA|NA|NA NU pilus assembly protein FimV MAG.C3.5_00147 666681.M301_0383 2.6e-153 548.1 Nitrosomonadales yeaD GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 4.2.1.9,5.1.3.15 ko:K01687,ko:K01792 ko00010,ko00290,ko00770,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00010,map00290,map00770,map01100,map01110,map01120,map01130,map01210,map01230 M00019,M00570 R01209,R02739,R04441,R05070 RC00468,RC00563,RC01714 ko00000,ko00001,ko00002,ko01000 Bacteria 1Q7VN@1224,2KKG9@206350,2VKZK@28216,COG0676@1,COG0676@2 NA|NA|NA G Belongs to the glucose-6-phosphate 1-epimerase family MAG.C3.5_00148 582744.Msip34_0372 0.0 1133.6 Nitrosomonadales ilvD 4.2.1.9 ko:K01687 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R01209,R04441,R05070 RC00468,RC01714 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_1259 Bacteria 1MUTQ@1224,2KMH6@206350,2VH5Q@28216,COG0129@1,COG0129@2 NA|NA|NA E Belongs to the IlvD Edd family MAG.C3.5_00149 1236959.BAMT01000011_gene3182 1.7e-118 432.2 Nitrosomonadales lgt GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008961,GO:0009058,GO:0009059,GO:0009249,GO:0009898,GO:0009987,GO:0010467,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0031224,GO:0031226,GO:0034645,GO:0036211,GO:0040007,GO:0042157,GO:0042158,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0051604,GO:0071704,GO:0071944,GO:0098552,GO:0098562,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.1.1.199 ko:K03438,ko:K13292 ko00000,ko01000,ko03009 Bacteria 1MVE3@1224,2KM6W@206350,2VHEW@28216,COG0682@1,COG0682@2 NA|NA|NA M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins MAG.C3.5_00150 1132855.KB913035_gene2452 1.2e-23 115.5 Nitrosomonadales Bacteria 1N05X@1224,2DNY9@1,2KN9A@206350,2VW4T@28216,32ZS2@2 NA|NA|NA S Protein of unknown function (DUF2805) MAG.C3.5_00151 1502770.JQMG01000001_gene151 2.1e-72 278.9 Nitrosomonadales ywhC ko:K06402 ko00000,ko01000,ko01002 Bacteria 1NSFF@1224,2KKUP@206350,2VHAM@28216,COG1994@1,COG1994@2 NA|NA|NA S Peptidase family M50 MAG.C3.5_00152 582744.Msip34_0921 1e-218 765.8 Nitrosomonadales trpS GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 ko:K01867 ko00970,map00970 M00359,M00360 R03664 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1MV4T@1224,2KKSF@206350,2VIEY@28216,COG0180@1,COG0180@2 NA|NA|NA J TIGRFAM tryptophanyl-tRNA synthetase MAG.C3.5_00153 582744.Msip34_0923 1.8e-107 395.6 Nitrosomonadales scpA ko:K05896 ko00000,ko03036 Bacteria 1MVCN@1224,2KKSY@206350,2VKE7@28216,COG1354@1,COG1354@2 NA|NA|NA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves MAG.C3.5_00154 582744.Msip34_0924 3.3e-76 291.2 Nitrosomonadales scpB GO:0003674,GO:0005488,GO:0005515,GO:0042802 ko:K06024 ko00000,ko03036 Bacteria 1PUA6@1224,2KKY9@206350,2VKIN@28216,COG1386@1,COG1386@2 NA|NA|NA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves MAG.C3.5_00155 582744.Msip34_0925 1.5e-136 492.7 Nitrosomonadales rluB GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.22 ko:K06178 ko00000,ko01000,ko03009 Bacteria 1MUCE@1224,2KKN3@206350,2VITB@28216,COG1187@1,COG1187@2 NA|NA|NA J Belongs to the pseudouridine synthase RsuA family MAG.C3.5_00157 582744.Msip34_0929 1.5e-145 522.3 Nitrosomonadales prmB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009007,GO:0009008,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0032775,GO:0034641,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044728,GO:0046483,GO:0071704,GO:0090304,GO:0140096,GO:0140097,GO:1901360,GO:1901564 2.1.1.297,2.1.1.298 ko:K02493,ko:K07320 R10806 RC00003,RC03279 ko00000,ko01000,ko03009,ko03012 Bacteria 1MX8Q@1224,2KMDB@206350,2VIPK@28216,COG2890@1,COG2890@2 NA|NA|NA J Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue MAG.C3.5_00158 1538295.JY96_01570 1.7e-45 188.7 unclassified Burkholderiales dapE GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009014,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0032153,GO:0042802,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0046872,GO:0046914,GO:0050897,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.1.18 ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 M00016 R02734 RC00064,RC00090 ko00000,ko00001,ko00002,ko01000 iECP_1309.ECP_2485,iIT341.HP0212 Bacteria 1KJN0@119065,1MW6G@1224,2VHRF@28216,COG0624@1,COG0624@2 NA|NA|NA E Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls MAG.C3.5_00159 666681.M301_2610 1.9e-63 248.8 Nitrosomonadales lipB GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0016874,GO:0016879,GO:0016979,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019222,GO:0019538,GO:0019752,GO:0032787,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048519,GO:0050789,GO:0051186,GO:0051188,GO:0051604,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0140096,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.3.1.181 ko:K03801 ko00785,ko01100,map00785,map01100 R07766,R07769 RC00039,RC00992,RC02867 ko00000,ko00001,ko01000 iECSF_1327.ECSF_0569,iSFV_1184.SFV_0696,iSFxv_1172.SFxv_0718 Bacteria 1MU6A@1224,2KMMM@206350,2VQ1Y@28216,COG0321@1,COG0321@2 NA|NA|NA H Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate MAG.C3.5_00160 1165096.ARWF01000001_gene1790 1e-30 139.4 Nitrosomonadales ybeD GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K09158 ko00000 Bacteria 1RGV5@1224,2KN2V@206350,2VTY5@28216,COG2921@1,COG2921@2 NA|NA|NA S Protein of unknown function (DUF493) MAG.C3.5_00161 582744.Msip34_2539 3.5e-155 554.7 Nitrosomonadales dacC 3.4.16.4 ko:K01286,ko:K07258 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011 Bacteria 1MUU7@1224,2KM20@206350,2VH46@28216,COG1686@1,COG1686@2 NA|NA|NA M Belongs to the peptidase S11 family MAG.C3.5_00162 1236959.BAMT01000002_gene1842 3.3e-88 332.0 Nitrosomonadales rlpA GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 ko:K03642 ko00000 Bacteria 1MZ8S@1224,2KKXH@206350,2VJAN@28216,COG0797@1,COG0797@2,COG3087@1,COG3087@2 NA|NA|NA M Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides MAG.C3.5_00163 582744.Msip34_2537 2.6e-160 571.6 Nitrosomonadales mrdB GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008360,GO:0016020,GO:0022603,GO:0022604,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 ko:K05837 ko00000,ko03036 Bacteria 1MUK3@1224,2KKVQ@206350,2VH8Q@28216,COG0772@1,COG0772@2 NA|NA|NA M Peptidoglycan polymerase that is essential for cell wall elongation MAG.C3.5_00164 582744.Msip34_2536 4.2e-291 1006.9 Nitrosomonadales mrdA GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042493,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0045229,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0071972,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 3.4.16.4 ko:K05515 ko00550,ko01501,map00550,map01501 ko00000,ko00001,ko01000,ko01011 iAF987.Gmet_0928,iEcE24377_1341.EcE24377A_0661,iPC815.YPO2604 Bacteria 1MV8C@1224,2KM2T@206350,2VHBZ@28216,COG0768@1,COG0768@2 NA|NA|NA M Catalyzes cross-linking of the peptidoglycan cell wall MAG.C3.5_00165 265072.Mfla_2493 2.3e-52 211.8 Nitrosomonadales mreD GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008360,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 ko:K03571 ko00000,ko03036 9.B.157.1 Bacteria 1RBNF@1224,2KN0S@206350,2VQQ3@28216,COG2891@1,COG2891@2 NA|NA|NA M TIGRFAM rod shape-determining protein MreD MAG.C3.5_00166 582744.Msip34_2534 5.2e-79 300.8 Nitrosomonadales mreC GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007163,GO:0008150,GO:0008360,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0030428,GO:0031224,GO:0031226,GO:0042546,GO:0043621,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071554,GO:0071840,GO:0071944,GO:0071963 ko:K03570 ko00000,ko03036 9.B.157.1 Bacteria 1N8ZS@1224,2KM0G@206350,2VK0Y@28216,COG1792@1,COG1792@2 NA|NA|NA M shape-determining protein MreC MAG.C3.5_00168 1101195.Meth11DRAFT_1780 4.3e-122 444.5 Nitrosomonadales birA GO:0000166,GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0004077,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0006082,GO:0006464,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009305,GO:0009374,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0017053,GO:0017076,GO:0017144,GO:0018130,GO:0018271,GO:0019538,GO:0019752,GO:0019842,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032991,GO:0033218,GO:0033293,GO:0034641,GO:0035639,GO:0036094,GO:0036211,GO:0042364,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043565,GO:0043603,GO:0043604,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046983,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1990837 2.7.1.33,6.3.4.15 ko:K01947,ko:K03524,ko:K04096 ko00770,ko00780,ko01100,map00770,map00780,map01100 M00120 R01074,R02971,R03018,R04391,R05145 RC00002,RC00017,RC00043,RC00070,RC00096,RC02896 ko00000,ko00001,ko00002,ko01000,ko03000 Bacteria 1MWCC@1224,2KMHI@206350,2VNXD@28216,COG0340@1,COG0340@2,COG1654@1,COG1654@2 NA|NA|NA HK Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor MAG.C3.5_00169 1236959.BAMT01000010_gene3235 8.6e-46 190.7 Nitrosomonadales coaX 2.7.1.33,6.3.4.15 ko:K01947,ko:K03525 ko00770,ko00780,ko01100,map00770,map00780,map01100 M00120 R01074,R02971,R03018,R04391,R05145 RC00002,RC00017,RC00043,RC00070,RC00096,RC02896 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUYA@1224,2KN1X@206350,2VK1G@28216,COG1521@1,COG1521@2 NA|NA|NA K Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis MAG.C3.5_00170 582744.Msip34_0813 6.6e-144 517.7 Nitrosomonadales ko:K03406 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko02035 Bacteria 1MU9B@1224,2KKQK@206350,2VGZ8@28216,COG0840@1,COG0840@2 NA|NA|NA NT PFAM chemotaxis sensory transducer MAG.C3.5_00172 583345.Mmol_1254 1.5e-236 826.2 Nitrosomonadales ko:K03406,ko:K03776 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko02035 Bacteria 1MU9B@1224,2KNK8@206350,2VGZ8@28216,COG0840@1,COG0840@2 NA|NA|NA T SMART chemotaxis sensory transducer MAG.C3.5_00176 582744.Msip34_1457 1.2e-213 749.6 Nitrosomonadales ppiD GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0008150,GO:0009897,GO:0009986,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031233,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0061077,GO:0071575,GO:0071944,GO:0098552 5.2.1.8 ko:K01802,ko:K03769,ko:K03770 ko00000,ko01000,ko03110 Bacteria 1MWV0@1224,2KM3X@206350,2VJCZ@28216,COG0760@1,COG0760@2 NA|NA|NA O PFAM PpiC-type peptidyl-prolyl cis-trans isomerase MAG.C3.5_00177 582744.Msip34_1456 2.8e-124 451.4 Nitrosomonadales fabI GO:0003674,GO:0003824,GO:0004312,GO:0004318,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0022607,GO:0030497,GO:0032787,GO:0034641,GO:0042364,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.10,1.3.1.9 ko:K00208 ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212 M00083,M00572 R01404,R04429,R04430,R04724,R04725,R04955,R04956,R04958,R04959,R04961,R04962,R04966,R04967,R04969,R04970,R07765,R10118,R10122,R11671 RC00052,RC00076,RC00120 ko00000,ko00001,ko00002,ko01000,ko01004 iECUMN_1333.ECUMN_1592 Bacteria 1MV05@1224,2KKN5@206350,2VIHE@28216,COG0623@1,COG0623@2 NA|NA|NA I Enoyl- acyl-carrier-protein reductase NADH MAG.C3.5_00178 265072.Mfla_1485 3.3e-123 448.0 Nitrosomonadales appC ko:K02034 ko02024,map02024 M00239 ko00000,ko00001,ko00002,ko02000 3.A.1.5 Bacteria 1MU26@1224,2KMEI@206350,2WESV@28216,COG1173@1,COG1173@2 NA|NA|NA EP PFAM binding-protein-dependent transport systems inner membrane component MAG.C3.5_00179 265072.Mfla_1484 2.9e-166 591.3 Nitrosomonadales oppB ko:K02033,ko:K13894 ko02010,ko02024,map02010,map02024 M00239,M00349 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.21,3.A.1.5.24 Bacteria 1NS80@1224,2KKFQ@206350,2WH9T@28216,COG0601@1,COG0601@2 NA|NA|NA EP PFAM binding-protein-dependent transport systems inner membrane component MAG.C3.5_00180 582744.Msip34_1453 1.5e-257 895.2 Nitrosomonadales appA ko:K02035 ko02024,map02024 M00239 ko00000,ko00001,ko00002,ko02000 3.A.1.5 Bacteria 1MUZH@1224,2KKDD@206350,2VMQS@28216,COG0747@1,COG0747@2 NA|NA|NA E PFAM extracellular solute-binding protein family 5 MAG.C3.5_00181 582744.Msip34_1452 6.8e-197 693.7 Nitrosomonadales mltD GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008150,GO:0008932,GO:0008933,GO:0009893,GO:0016020,GO:0016740,GO:0016757,GO:0019222,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043085,GO:0044093,GO:0044464,GO:0048518,GO:0050789,GO:0050790,GO:0051341,GO:0051353,GO:0061783,GO:0065007,GO:0065009 ko:K08307,ko:K12204 ko00000,ko01000,ko01011,ko02044 3.A.7.10.1,3.A.7.9.1 Bacteria 1MWKE@1224,2KM60@206350,2VIR7@28216,COG0741@1,COG0741@2,COG1388@1,COG1388@2 NA|NA|NA M Lysin motif MAG.C3.5_00182 582744.Msip34_1451 6.2e-73 280.8 Nitrosomonadales gloB GO:0003674,GO:0003824,GO:0004416,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0016790,GO:0034641,GO:0043603,GO:0044237,GO:0051186,GO:0071704,GO:1901564 3.1.2.6 ko:K01069 ko00620,map00620 R01736 RC00004,RC00137 ko00000,ko00001,ko01000 Bacteria 1MU8Q@1224,2KKV3@206350,2VGZG@28216,COG0491@1,COG0491@2 NA|NA|NA S Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid MAG.C3.5_00183 1165096.ARWF01000001_gene183 4.9e-83 314.3 Nitrosomonadales yafS Bacteria 1QTWC@1224,2KMKA@206350,2VQ89@28216,COG0500@1,COG2226@2 NA|NA|NA Q Methyltransferase domain MAG.C3.5_00184 1502770.JQMG01000001_gene1763 1.9e-66 258.5 Nitrosomonadales rnhA 3.1.26.4 ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Bacteria 1RCZ1@1224,2KMT3@206350,2VR4W@28216,COG0328@1,COG0328@2 NA|NA|NA L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids MAG.C3.5_00185 265072.Mfla_1478 2.3e-90 338.6 Nitrosomonadales dnaQ GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016787,GO:0016788,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0045004,GO:0045005,GO:0046483,GO:0050896,GO:0051716,GO:0061695,GO:0071704,GO:0090304,GO:0090305,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7,3.1.26.4 ko:K02342,ko:K14159 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1MV8Z@1224,2KKHK@206350,2VH1Z@28216,COG0847@1,COG0847@2 NA|NA|NA L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease MAG.C3.5_00186 666681.M301_0859 1.3e-125 456.1 Nitrosomonadales Bacteria 1MZTA@1224,2KNQK@206350,2VJTZ@28216,COG0583@1,COG0583@2 NA|NA|NA K Transcriptional regulator, LysR family MAG.C3.5_00188 1123393.KB891317_gene2207 7.2e-86 323.9 Hydrogenophilales mscS GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022607,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0055082,GO:0055085,GO:0065003,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 ko:K03442 ko00000,ko02000 1.A.23.2 Bacteria 1KSDQ@119069,1N596@1224,2VQ9J@28216,COG0668@1,COG0668@2 NA|NA|NA M Conserved TM helix MAG.C3.5_00189 582744.Msip34_0340 1.1e-108 399.8 Nitrosomonadales GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 Bacteria 1MVMI@1224,2KKHH@206350,2VH3S@28216,COG1305@1,COG1305@2 NA|NA|NA E Transglutaminase/protease-like homologues MAG.C3.5_00190 1101195.Meth11DRAFT_1165 0.0 1231.5 Nitrosomonadales MA20_16190 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 Bacteria 1MX5P@1224,2KM2V@206350,2VJEU@28216,COG2307@1,COG2307@2,COG2308@1,COG2308@2 NA|NA|NA S A predicted alpha-helical domain with a conserved ER motif. MAG.C3.5_00191 582744.Msip34_0623 6.2e-180 636.7 Nitrosomonadales pilT ko:K02669 ko00000,ko02035,ko02044 3.A.15.2 Bacteria 1MU3J@1224,2KKFY@206350,2VHHW@28216,COG2805@1,COG2805@2 NA|NA|NA NU PFAM type II secretion system protein E MAG.C3.5_00192 265072.Mfla_2108 7.1e-74 283.9 Nitrosomonadales yggS GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 ko:K06997 ko00000 Bacteria 1MWN7@1224,2KKJ3@206350,2VHNY@28216,COG0325@1,COG0325@2 NA|NA|NA S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis MAG.C3.5_00193 582744.Msip34_0621 9.3e-96 356.7 Nitrosomonadales proC 1.5.1.2 ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 M00015 R01248,R01251,R03291,R03293 RC00054,RC00083 ko00000,ko00001,ko00002,ko01000 Bacteria 1R5J1@1224,2KKDT@206350,2VJD1@28216,COG0345@1,COG0345@2 NA|NA|NA E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline MAG.C3.5_00194 265072.Mfla_2110 9.3e-61 240.0 Nitrosomonadales yggT GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02221 ko00000,ko02044 Bacteria 1RCZV@1224,2KMRR@206350,2VRHV@28216,COG0762@1,COG0762@2 NA|NA|NA S YGGT family MAG.C3.5_00195 1132855.KB913035_gene2211 4.4e-187 661.4 Nitrosomonadales Bacteria 1MXBK@1224,2KNGS@206350,2W1AV@28216,COG0699@1,COG0699@2 NA|NA|NA S Dynamin family MAG.C3.5_00196 582744.Msip34_0619 3.8e-228 797.3 Nitrosomonadales rng GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008996,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360 ko:K08301 ko00000,ko01000,ko03009,ko03019 Bacteria 1MV65@1224,2KM8H@206350,2VI3N@28216,COG1530@1,COG1530@2 NA|NA|NA J TIGRFAM ribonuclease, Rne Rng family MAG.C3.5_00197 3988.XP_002537144.1 2.3e-59 235.3 Streptophyta ko:K06287 ko00000 Viridiplantae 37UIQ@33090,3GKBA@35493,COG0424@1,KOG1509@2759 NA|NA|NA D Maf-like protein MAG.C3.5_00198 582744.Msip34_0616 6.1e-85 320.5 Nitrosomonadales marC ko:K05595 ko00000,ko02000 2.A.95.1 Bacteria 1MX5T@1224,2KKWH@206350,2VIBH@28216,COG2095@1,COG2095@2 NA|NA|NA U PFAM multiple antibiotic resistance (MarC)-related protein MAG.C3.5_00199 582744.Msip34_0615 6.3e-57 226.9 Nitrosomonadales nudJ GO:0003674,GO:0003824,GO:0004787,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017110,GO:0017111 3.6.1.55 ko:K03574,ko:K12152 ko00000,ko01000,ko03400 iSbBS512_1146.SbBS512_E1312 Bacteria 1N03W@1224,2KMQH@206350,2VRC0@28216,COG1051@1,COG1051@2 NA|NA|NA F Belongs to the Nudix hydrolase family. NudJ subfamily MAG.C3.5_00200 265072.Mfla_2115 1.9e-184 651.7 Nitrosomonadales mnmA GO:0001510,GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0003824,GO:0004808,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016782,GO:0016783,GO:0030488,GO:0032259,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.8.1.13 ko:K00566 ko04122,map04122 R08700 RC02313,RC02315 ko00000,ko00001,ko01000,ko03016 Bacteria 1MUT1@1224,2KM9V@206350,2VJRR@28216,COG0482@1,COG0482@2 NA|NA|NA J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 MAG.C3.5_00201 582744.Msip34_0612 5e-81 307.4 Nitrosomonadales yibF GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.5.1.18 ko:K00799 ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418 R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905 RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944 ko00000,ko00001,ko01000,ko02000 1.A.12.2.2,1.A.12.3.2 Bacteria 1RHSK@1224,2KM98@206350,2VIJ5@28216,COG0625@1,COG0625@2 NA|NA|NA O PFAM Glutathione S-transferase MAG.C3.5_00202 582744.Msip34_0611 2.9e-98 365.2 Nitrosomonadales nadC 2.4.2.19 ko:K00767 ko00760,ko01100,map00760,map01100 M00115 R03348 RC02877 ko00000,ko00001,ko00002,ko01000 Bacteria 1MW0C@1224,2KMJE@206350,2VHSU@28216,COG0157@1,COG0157@2 NA|NA|NA H Belongs to the NadC ModD family MAG.C3.5_00203 582744.Msip34_0610 1.6e-276 958.4 Nitrosomonadales gspE ko:K02454,ko:K02652 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02035,ko02044 3.A.15,3.A.15.2 Bacteria 1MU7V@1224,2KKDI@206350,2VHQ1@28216,COG2804@1,COG2804@2 NA|NA|NA NU General secretory system II protein E domain protein MAG.C3.5_00204 582744.Msip34_0609 4.2e-298 1030.0 Nitrosomonadales ilvI GO:0000287,GO:0003674,GO:0003824,GO:0003984,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0019842,GO:0030976,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901681 2.2.1.6 ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 iAPECO1_1312.APECO1_1907,iB21_1397.B21_00078,iBWG_1329.BWG_0073,iECBD_1354.ECBD_3539,iECB_1328.ECB_00079,iECD_1391.ECD_00079,iUTI89_1310.UTI89_C0085,iYL1228.KPN_00082 Bacteria 1MU6U@1224,2KM1K@206350,2VJ55@28216,COG0028@1,COG0028@2 NA|NA|NA E TIGRFAM acetolactate synthase, large subunit, biosynthetic type MAG.C3.5_00205 582744.Msip34_0608 2.9e-79 301.2 Nitrosomonadales ilvH GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 ko:K01653 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 iAPECO1_1312.APECO1_1906,iECNA114_1301.ECNA114_0072,iEcSMS35_1347.EcSMS35_0084,iG2583_1286.G2583_0082,iSFxv_1172.SFxv_0077,iUTI89_1310.UTI89_C0086 Bacteria 1RAGN@1224,2KMDF@206350,2VH1H@28216,COG0440@1,COG0440@2 NA|NA|NA E TIGRFAM acetolactate synthase, small subunit MAG.C3.5_00206 265072.Mfla_2121 1e-171 609.4 Nitrosomonadales ilvC 1.1.1.86 ko:K00053 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R03051,R04439,R04440,R05068,R05069,R05071 RC00726,RC00836,RC00837,RC01726 ko00000,ko00001,ko00002,ko01000 iHN637.CLJU_RS10005,iHN637.CLJU_RS10010,iJN746.PP_4678,iLJ478.TM0550 Bacteria 1MV7M@1224,2KMD7@206350,2VIQ5@28216,COG0059@1,COG0059@2 NA|NA|NA EH Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate MAG.C3.5_00207 1304883.KI912532_gene2041 2.3e-111 408.7 Rhodocyclales psd GO:0003674,GO:0003824,GO:0004609,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0071704,GO:0090407,GO:1901576 4.1.1.65 ko:K01613 ko00564,ko01100,ko01110,map00564,map01100,map01110 M00093 R02055 RC00299 ko00000,ko00001,ko00002,ko01000 iECNA114_1301.ECNA114_4379,iECSF_1327.ECSF_4049 Bacteria 1MVT4@1224,2KUHW@206389,2VJCQ@28216,COG0688@1,COG0688@2 NA|NA|NA I Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) MAG.C3.5_00208 582744.Msip34_0605 4.4e-84 317.4 Nitrosomonadales nudH GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010468,GO:0010604,GO:0010605,GO:0010608,GO:0010629,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019219,GO:0019222,GO:0019439,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0033554,GO:0034353,GO:0034641,GO:0034655,GO:0043167,GO:0043169,GO:0043170,GO:0043487,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0045935,GO:0046483,GO:0046700,GO:0046872,GO:0048518,GO:0048519,GO:0048522,GO:0050779,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090304,GO:1901360,GO:1901361,GO:1901575 ko:K08311 ko03018,map03018 R10816 RC00002 ko00000,ko00001,ko01000,ko03019 Bacteria 1RDGJ@1224,2KKCG@206350,2VIDX@28216,COG0494@1,COG0494@2 NA|NA|NA L Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage MAG.C3.5_00210 582744.Msip34_0603 1.1e-81 309.3 Nitrosomonadales ko:K16260 ko00680,ko01120,map00680,map01120 ko00000,ko00001 Bacteria 1RD9A@1224,2KMT1@206350,2VQDY@28216,COG3832@1,COG3832@2 NA|NA|NA S Polyketide cyclase / dehydrase and lipid transport MAG.C3.5_00211 153948.NAL212_2190 2e-26 125.6 Nitrosomonadales pilA ko:K02650,ko:K02682 ko02020,map02020 ko00000,ko00001,ko02035,ko02044 3.A.15.2 Bacteria 1N7EQ@1224,2VVSJ@28216,373N1@32003,COG4969@1,COG4969@2 NA|NA|NA NU Belongs to the N-Me-Phe pilin family MAG.C3.5_00212 1502770.JQMG01000001_gene1332 1.6e-59 235.7 Proteobacteria ko:K16260 ko00680,ko01120,map00680,map01120 ko00000,ko00001 Bacteria 1QZAY@1224,COG3832@1,COG3832@2 NA|NA|NA S Polyketide cyclase / dehydrase and lipid transport MAG.C3.5_00213 666681.M301_2534 1.3e-222 778.9 Nitrosomonadales yegQ GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 Bacteria 1MUQG@1224,2KNDU@206350,2VH51@28216,COG0826@1,COG0826@2 NA|NA|NA O Peptidase family U32 C-terminal domain MAG.C3.5_00214 582744.Msip34_0960 2.1e-170 605.1 Nitrosomonadales aroG GO:0003674,GO:0003824,GO:0003849,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019438,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.54 ko:K01626 ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024 M00022 R01826 RC00435 ko00000,ko00001,ko00002,ko01000 iECNA114_1301.ECNA114_0684,iECSF_1327.ECSF_0680,iEcSMS35_1347.EcSMS35_0777,iLF82_1304.LF82_0146,iNRG857_1313.NRG857_03335,iYL1228.KPN_00758 Bacteria 1MU5Q@1224,2KKBA@206350,2VH4W@28216,COG0722@1,COG0722@2 NA|NA|NA E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) MAG.C3.5_00215 582744.Msip34_0030 1.1e-155 556.2 Nitrosomonadales fre GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006807,GO:0006950,GO:0006979,GO:0008047,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0019538,GO:0030091,GO:0030234,GO:0042602,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0050896,GO:0052875,GO:0055114,GO:0065007,GO:0065009,GO:0071704,GO:0098772,GO:1901564 1.16.1.3,1.17.1.1,1.18.1.2,1.19.1.1,1.5.1.41 ko:K00523,ko:K00528,ko:K02823,ko:K05368,ko:K18248,ko:K20256 ko00240,ko00520,ko00627,ko00740,ko00860,ko01100,ko01120,ko02024,map00240,map00520,map00627,map00740,map00860,map01100,map01120,map02024 M00637 R00097,R00823,R00825,R03391,R03392,R05705,R10159 RC00126,RC00192,RC00220,RC00230 br01602,ko00000,ko00001,ko00002,ko01000 iSF_1195.SF3920,iSFxv_1172.SFxv_4273,iS_1188.S3832 Bacteria 1MV72@1224,2KKU7@206350,2VI9K@28216,COG0543@1,COG0543@2,COG1018@1,COG1018@2 NA|NA|NA C PFAM oxidoreductase FAD NAD(P)-binding domain protein MAG.C3.5_00216 582744.Msip34_0029 8e-35 153.3 Nitrosomonadales fxsA 2.3.3.13 ko:K01649,ko:K07113 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 M00432 R01213 RC00004,RC00470,RC02754 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 1NHHU@1224,2KN6I@206350,2VX8I@28216,COG3030@1,COG3030@2 NA|NA|NA S PFAM FxsA cytoplasmic membrane protein MAG.C3.5_00217 265072.Mfla_0029 4.4e-31 140.6 Nitrosomonadales cutA GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0016043,GO:0022607,GO:0042221,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044424,GO:0044464,GO:0046688,GO:0046872,GO:0046914,GO:0050896,GO:0051259,GO:0051260,GO:0065003,GO:0071840 4.2.3.1 ko:K01733,ko:K03926 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 M00018 R01466,R05086 RC00017,RC00526 ko00000,ko00001,ko00002,ko01000 Bacteria 1N6TN@1224,2KN3J@206350,2VUC8@28216,COG1324@1,COG1324@2 NA|NA|NA P PFAM CutA1 divalent ion tolerance protein MAG.C3.5_00218 666681.M301_0061 8.7e-185 653.7 Nitrosomonadales dsbD GO:0003674,GO:0003756,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008152,GO:0009266,GO:0009628,GO:0009898,GO:0009987,GO:0015035,GO:0015036,GO:0016020,GO:0016021,GO:0016043,GO:0016491,GO:0016667,GO:0016853,GO:0016860,GO:0016864,GO:0017004,GO:0019725,GO:0022607,GO:0031224,GO:0031226,GO:0034622,GO:0042221,GO:0042493,GO:0042592,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0055114,GO:0065003,GO:0065007,GO:0065008,GO:0071502,GO:0071840,GO:0071944,GO:0098552,GO:0098562,GO:0140096 1.8.1.8 ko:K04084 ko00000,ko01000,ko03110 5.A.1.1 iECSE_1348.ECSE_4435 Bacteria 1MU8W@1224,2KKIB@206350,2VI8I@28216,COG4232@1,COG4232@2 NA|NA|NA CO Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps MAG.C3.5_00219 1165096.ARWF01000001_gene1478 2.8e-46 191.8 Nitrosomonadales tlpA Bacteria 1MZ5J@1224,2KMY4@206350,2VU93@28216,COG0526@1,COG0526@2 NA|NA|NA CO alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen MAG.C3.5_00220 582744.Msip34_0025 1.1e-49 202.6 Nitrosomonadales aroQ GO:0003674,GO:0003824,GO:0003855,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 3.4.13.9,4.2.1.10 ko:K01271,ko:K03785,ko:K03786 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R03084 RC00848 ko00000,ko00001,ko00002,ko01000,ko01002 iIT341.HP1038,iJN746.PP_0560 Bacteria 1RDDT@1224,2KMU8@206350,2VR4Y@28216,COG0757@1,COG0757@2 NA|NA|NA E Catalyzes a trans-dehydration via an enolate intermediate MAG.C3.5_00221 1236959.BAMT01000017_gene2389 1.6e-55 222.2 Nitrosomonadales accB GO:0003674,GO:0003824,GO:0003989,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009305,GO:0009987,GO:0016049,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901564,GO:1901576 2.3.1.12 ko:K00627,ko:K02160 ko00010,ko00020,ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00010,map00020,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00307,M00376 R00209,R00742,R02569 RC00004,RC00040,RC00367,RC02742,RC02857 br01601,ko00000,ko00001,ko00002,ko01000 iYL1228.KPN_03664 Bacteria 1RCXA@1224,2KMQS@206350,2VR5S@28216,COG0511@1,COG0511@2 NA|NA|NA I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA MAG.C3.5_00222 582744.Msip34_0023 3.6e-236 823.9 Nitrosomonadales accC GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.3.4.6,6.4.1.1,6.4.1.2 ko:K01941,ko:K01959,ko:K01961 ko00020,ko00061,ko00220,ko00620,ko00640,ko00720,ko00791,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko01230,map00020,map00061,map00220,map00620,map00640,map00720,map00791,map01100,map01110,map01120,map01130,map01200,map01212,map01230 M00082,M00173,M00376,M00620 R00344,R00742,R00774,R04385 RC00040,RC00253,RC00367,RC00378 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU4H@1224,2KM9C@206350,2VISB@28216,COG0439@1,COG0439@2 NA|NA|NA I PFAM Carbamoyl-phosphate synthase L chain MAG.C3.5_00223 265072.Mfla_0023 3.7e-133 481.1 Nitrosomonadales prmA GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006480,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018011,GO:0018012,GO:0018022,GO:0018023,GO:0018193,GO:0018194,GO:0018205,GO:0019538,GO:0031365,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 ko:K02687 ko00000,ko01000,ko03009 Bacteria 1MUPC@1224,2KMH9@206350,2VH76@28216,COG2264@1,COG2264@2 NA|NA|NA J Methylates ribosomal protein L11 MAG.C3.5_00224 666681.M301_0055 1.4e-50 206.8 Nitrosomonadales Bacteria 1RGAU@1224,2A4J7@1,2KPB0@206350,2VU2M@28216,30T5U@2 NA|NA|NA S zinc-ribbon domain MAG.C3.5_00225 582744.Msip34_0019 3.3e-129 468.0 Nitrosomonadales oxyR ko:K04761 ko02026,map02026 ko00000,ko00001,ko03000 Bacteria 1MVA1@1224,2KKKQ@206350,2VIBJ@28216,COG0583@1,COG0583@2 NA|NA|NA K Transcriptional regulator, LysR family MAG.C3.5_00226 1132855.KB913035_gene440 0.0 1314.3 Nitrosomonadales katG 1.11.1.21 ko:K03782 ko00360,ko00380,ko00940,ko00983,ko01100,ko01110,map00360,map00380,map00940,map00983,map01100,map01110 R00602,R00698,R02596,R02670,R03919,R04007,R07443,R11906 RC00034,RC00213,RC00767,RC02141 ko00000,ko00001,ko01000 Bacteria 1MUBF@1224,2KKY1@206350,2VH5H@28216,COG0376@1,COG0376@2 NA|NA|NA P Peroxidase MAG.C3.5_00227 420662.Mpe_B0017 3.8e-30 137.9 unclassified Burkholderiales Bacteria 1KNUR@119065,1NBRN@1224,2E4CH@1,2VVBB@28216,32Z7Y@2 NA|NA|NA S PilZ domain MAG.C3.5_00228 666681.M301_0836 7.7e-53 213.0 Betaproteobacteria yodA Bacteria 1RHA5@1224,2VRCH@28216,COG1942@1,COG1942@2 NA|NA|NA S tautomerase MAG.C3.5_00229 1165096.ARWF01000001_gene1064 5.8e-107 394.0 Nitrosomonadales yyaM Bacteria 1MWSU@1224,2KMHS@206350,2VHP3@28216,COG0697@1,COG0697@2 NA|NA|NA EG EamA-like transporter family MAG.C3.5_00230 1165096.ARWF01000001_gene557 1.7e-267 928.3 Nitrosomonadales ko:K09136 ko00000,ko03009 Bacteria 1MV7K@1224,2KKTK@206350,2VHZY@28216,COG1944@1,COG1944@2 NA|NA|NA O YcaO cyclodehydratase, ATP-ad Mg2+-binding MAG.C3.5_00231 1318628.MARLIPOL_02710 8.9e-30 136.3 Gammaproteobacteria tfoX ko:K07343 ko00000 Bacteria 1N8X8@1224,1SC6J@1236,COG3070@1,COG3070@2 NA|NA|NA K Regulator of MAG.C3.5_00232 582744.Msip34_0572 2e-138 498.8 Nitrosomonadales holA GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1MWYT@1224,2KKVI@206350,2VIKX@28216,COG1466@1,COG1466@2 NA|NA|NA L TIGRFAM DNA polymerase III, delta subunit MAG.C3.5_00233 582744.Msip34_0573 6e-51 207.2 Nitrosomonadales lptE GO:0001530,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0008289,GO:0009279,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044462,GO:0044464,GO:0045229,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0097367,GO:1901264 ko:K03643 ko00000,ko02000 1.B.42.1 iECH74115_1262.ECH74115_0730,iECSP_1301.ECSP_0694,iECs_1301.ECs0679,iG2583_1286.G2583_0804,iZ_1308.Z0788 Bacteria 1N13K@1224,2KMX8@206350,2VU54@28216,COG2980@1,COG2980@2 NA|NA|NA M Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane MAG.C3.5_00234 1101195.Meth11DRAFT_0648 0.0 1536.9 Nitrosomonadales leuS GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 ko:K01869 ko00970,map00970 M00359,M00360 R03657 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 iECOK1_1307.ECOK1_0652,iECS88_1305.ECS88_0684,iNRG857_1313.NRG857_02925,iPC815.YPO2610 Bacteria 1MV47@1224,2KKE0@206350,2VH2J@28216,COG0495@1,COG0495@2 NA|NA|NA J Belongs to the class-I aminoacyl-tRNA synthetase family MAG.C3.5_00235 506534.Rhein_3884 2e-11 77.0 Gammaproteobacteria ko:K03406 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko02035 Bacteria 1MX3N@1224,1RQ7N@1236,COG0840@1,COG0840@2 NA|NA|NA NT chemotaxis, protein MAG.C3.5_00236 1132855.KB913035_gene1713 7e-70 270.4 Nitrosomonadales trpF GO:0000162,GO:0003674,GO:0003824,GO:0004425,GO:0004640,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.48,4.2.1.160,4.2.1.20,5.3.1.24 ko:K01696,ko:K01817,ko:K13498,ko:K22100 ko00260,ko00400,ko00790,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map00790,map01100,map01110,map01130,map01230 M00023,M00840 R00674,R02340,R02722,R03508,R03509,R11072 RC00209,RC00210,RC00700,RC00701,RC00944,RC00945,RC02868,RC03343 ko00000,ko00001,ko00002,ko01000 iJN678.trpF,iPC815.YPO2205,iSBO_1134.SBO_1804,iSDY_1059.SDY_1330 Bacteria 1RA87@1224,2KMP3@206350,2VPZV@28216,COG0135@1,COG0135@2 NA|NA|NA E Belongs to the TrpF family MAG.C3.5_00237 265072.Mfla_1700 1.7e-102 379.0 Nitrosomonadales truA GO:0000049,GO:0001522,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0030312,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363 5.4.99.12 ko:K06173 ko00000,ko01000,ko03016 Bacteria 1MUYI@1224,2KKRM@206350,2VI0R@28216,COG0101@1,COG0101@2 NA|NA|NA J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs MAG.C3.5_00238 666681.M301_1175 3.1e-22 112.1 Nitrosomonadales ko:K02008,ko:K16785 ko02010,map02010 M00245,M00246,M00582 ko00000,ko00001,ko00002,ko02000 3.A.1.18,3.A.1.22,3.A.1.23,3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 Bacteria 1N7EI@1224,2KP0B@206350,2VWJT@28216,COG0619@1,COG0619@2 NA|NA|NA P Cobalt transport protein MAG.C3.5_00239 582744.Msip34_1549 1e-177 630.9 Nitrosomonadales fimV ko:K07288,ko:K08086 ko00000 Bacteria 1MXV7@1224,2KMD2@206350,2VHX1@28216,COG3170@1,COG3170@2 NA|NA|NA NU pilus assembly protein FimV MAG.C3.5_00240 1132855.KB913035_gene1717 5.1e-188 663.7 Nitrosomonadales asd GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004073,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006549,GO:0006553,GO:0006555,GO:0006566,GO:0006790,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009081,GO:0009082,GO:0009085,GO:0009086,GO:0009088,GO:0009089,GO:0009090,GO:0009092,GO:0009097,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0033554,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0050896,GO:0051716,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.11 ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00017,M00018,M00033,M00525,M00526,M00527 R02291 RC00684 ko00000,ko00001,ko00002,ko01000 iECP_1309.ECP_3527 Bacteria 1MUHG@1224,2KKMI@206350,2VH2N@28216,COG0136@1,COG0136@2 NA|NA|NA E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate MAG.C3.5_00241 582744.Msip34_1551 1.4e-182 645.6 Nitrosomonadales leuB GO:0000287,GO:0003674,GO:0003824,GO:0003862,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0030145,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034198,GO:0042594,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0055114,GO:0071496,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1990928 1.1.1.85 ko:K00052 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 M00432,M00535 R00994,R04426,R10052 RC00084,RC00417,RC03036 br01601,ko00000,ko00001,ko00002,ko01000 iECs_1301.ECs0077,iYL1228.KPN_00079,iZ_1308.Z0082 Bacteria 1MUH4@1224,2KMFH@206350,2VH2M@28216,COG0473@1,COG0473@2 NA|NA|NA CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate MAG.C3.5_00242 582744.Msip34_1552 2.6e-104 384.8 Nitrosomonadales leuD 4.2.1.33,4.2.1.35 ko:K01704 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 M00432,M00535 R03896,R03898,R03968,R04001,R10170 RC00976,RC00977,RC01041,RC01046,RC03072 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 1MVXB@1224,2KM7B@206350,2VIJC@28216,COG0066@1,COG0066@2 NA|NA|NA E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate MAG.C3.5_00244 1101195.Meth11DRAFT_1036 1.3e-244 852.0 Nitrosomonadales leuC 4.2.1.33,4.2.1.35 ko:K01703 ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230 M00432,M00535 R03896,R03898,R03968,R04001,R08620,R08624,R08628,R08634,R08641,R08645,R10170 RC00497,RC00976,RC00977,RC01041,RC01046,RC03072 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 1MVYR@1224,2KMDA@206350,2VHSH@28216,COG0065@1,COG0065@2 NA|NA|NA E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate MAG.C3.5_00245 582744.Msip34_1555 1.5e-75 288.9 Nitrosomonadales yajQ GO:0000049,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0009987,GO:0017076,GO:0019001,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0033554,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K09767 ko00000 Bacteria 1RDTF@1224,2KKK8@206350,2VPZU@28216,COG1666@1,COG1666@2 NA|NA|NA S Belongs to the UPF0234 family MAG.C3.5_00246 582744.Msip34_1557 1.8e-50 204.9 Nitrosomonadales ppnP 2.4.2.1,2.4.2.2 ko:K09913 ko00230,ko00240,map00230,map00240 R01561,R01570,R01863,R01876,R02147,R02296,R02297 RC00063,RC00122 ko00000,ko00001,ko01000 Bacteria 1MZ8N@1224,2KMXP@206350,2VSCI@28216,COG3123@1,COG3123@2 NA|NA|NA S Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions MAG.C3.5_00247 1163617.SCD_n02094 2.7e-21 107.8 Betaproteobacteria ko:K15383 ko00000,ko02000 9.A.58.2 Bacteria 1N759@1224,2VVPU@28216,COG4095@1,COG4095@2 NA|NA|NA S PQ loop repeat MAG.C3.5_00248 1101195.Meth11DRAFT_1033 2.6e-222 777.7 Nitrosomonadales argG GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 M00029,M00844,M00845 R01954 RC00380,RC00629 ko00000,ko00001,ko00002,ko01000,ko04147 iJN678.argG,iSB619.SA_RS04675 Bacteria 1MV0Y@1224,2KKKM@206350,2VJ7Z@28216,COG0137@1,COG0137@2 NA|NA|NA E Belongs to the argininosuccinate synthase family. Type 1 subfamily MAG.C3.5_00249 582744.Msip34_1559 2.3e-24 117.9 Nitrosomonadales Bacteria 1N6VJ@1224,2E7Z7@1,2KNWT@206350,2VW3V@28216,332DJ@2 NA|NA|NA MAG.C3.5_00250 582744.Msip34_1560 1.6e-163 582.0 Nitrosomonadales argF GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 ko:K00611 ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230 M00029,M00844 R01398 RC00096 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUFM@1224,2KKJ5@206350,2VIVG@28216,COG0078@1,COG0078@2 NA|NA|NA E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline MAG.C3.5_00251 582744.Msip34_1561 1.3e-186 659.1 Nitrosomonadales argD GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 2.6.1.11,2.6.1.17 ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00028,M00845 R02283,R04475 RC00006,RC00062 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1MV3C@1224,2KM17@206350,2VHEB@28216,COG4992@1,COG4992@2 NA|NA|NA E PFAM Aminotransferase class-III MAG.C3.5_00252 1101195.Meth11DRAFT_1030 4.8e-61 240.7 Nitrosomonadales Bacteria 1RFIZ@1224,2KMP8@206350,2VRTS@28216,COG3748@1,COG3748@2 NA|NA|NA S Urate oxidase N-terminal MAG.C3.5_00254 582744.Msip34_1564 1.3e-172 612.5 Nitrosomonadales alcE 1.14.15.7 ko:K00479,ko:K00499 ko00260,map00260 R07409 RC00087 ko00000,ko00001,ko01000 Bacteria 1MWXW@1224,2KKI4@206350,2VH18@28216,COG4638@1,COG4638@2 NA|NA|NA P Ring hydroxylating alpha subunit (catalytic domain) MAG.C3.5_00255 748247.AZKH_4524 2e-41 178.7 Rhodocyclales avxIA Bacteria 1MU7T@1224,2KZTM@206389,2VNQ5@28216,COG2931@1,COG2931@2 NA|NA|NA Q Haemolysin-type calcium-binding repeat (2 copies) MAG.C3.5_00256 582744.Msip34_1565 6.8e-108 397.1 Nitrosomonadales ko:K15270 ko00000,ko02000 2.A.7.3.7 Bacteria 1MZXM@1224,2KMF0@206350,2VK90@28216,COG0697@1,COG0697@2 NA|NA|NA EG EamA-like transporter family MAG.C3.5_00257 582744.Msip34_1566 4.9e-44 184.5 Nitrosomonadales Bacteria 1PJIF@1224,2A8KR@1,2KN5W@206350,2W80D@28216,30XP5@2 NA|NA|NA MAG.C3.5_00258 582744.Msip34_1567 9.3e-102 376.3 Nitrosomonadales gacA ko:K02282,ko:K07689 ko02020,ko02025,ko02026,ko05111,map02020,map02025,map02026,map05111 M00475 ko00000,ko00001,ko00002,ko02022,ko02035,ko02044 Bacteria 1MWGM@1224,2KKFM@206350,2VQ32@28216,COG2197@1,COG2197@2 NA|NA|NA T PFAM response regulator receiver MAG.C3.5_00259 582744.Msip34_1568 1.9e-234 818.5 Nitrosomonadales 2.7.13.3 ko:K07675 ko02020,map02020 M00473 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1MWPN@1224,2KM0S@206350,2VNHG@28216,COG4585@1,COG4585@2 NA|NA|NA T histidine kinase HAMP region domain protein MAG.C3.5_00260 582744.Msip34_1723 8.1e-67 260.0 Nitrosomonadales hpt GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.2.8,6.3.4.19 ko:K00760,ko:K15780 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 R00190,R01132,R01229,R02142,R08237,R08238,R08245 RC00063,RC00122 ko00000,ko00001,ko01000,ko03016 Bacteria 1NRT8@1224,2KMTN@206350,2VRM9@28216,COG0634@1,COG0634@2 NA|NA|NA F Phosphoribosyl transferase domain MAG.C3.5_00261 1236959.BAMT01000009_gene3439 9.4e-129 466.5 Nitrosomonadales galU 2.7.7.9 ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 M00129,M00361,M00362,M00549 R00289 RC00002 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV5F@1224,2KM2M@206350,2VH00@28216,COG1210@1,COG1210@2 NA|NA|NA M PFAM Nucleotidyl transferase MAG.C3.5_00262 265072.Mfla_1278 4.7e-234 817.4 Nitrosomonadales capD 4.2.1.115 ko:K15894 ko00520,map00520 R09697 RC02609 ko00000,ko00001,ko01000 Bacteria 1MWKY@1224,2KM3V@206350,2VHGF@28216,COG1086@1,COG1086@2 NA|NA|NA GM PFAM polysaccharide biosynthesis protein CapD MAG.C3.5_00263 1165096.ARWF01000001_gene470 1.4e-96 359.8 Betaproteobacteria wbpL 2.7.8.33,2.7.8.35 ko:K02851,ko:K13007 R08856 RC00002 ko00000,ko01000,ko01003,ko01005 Bacteria 1MWYW@1224,2VNAG@28216,COG0472@1,COG0472@2 NA|NA|NA M PFAM Glycosyl transferase family 4 MAG.C3.5_00264 1165096.ARWF01000001_gene471 5.3e-34 150.6 Nitrosomonadales wbpV 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 Bacteria 1MX2J@1224,2KKJX@206350,2VJHC@28216,COG0451@1,COG0451@2 NA|NA|NA M PFAM NAD-dependent epimerase dehydratase MAG.C3.5_00268 582744.Msip34_2543 3.5e-104 384.4 Nitrosomonadales lipA GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 ko:K03644 ko00785,ko01100,map00785,map01100 R07767,R07768 RC01978 ko00000,ko00001,ko01000 Bacteria 1MVRD@1224,2KKIJ@206350,2VIFE@28216,COG0320@1,COG0320@2 NA|NA|NA H Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives MAG.C3.5_00269 582744.Msip34_1077 0.0 2055.8 Nitrosomonadales hrpA GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 ko:K03578 ko00000,ko01000 Bacteria 1MUEQ@1224,2KM5A@206350,2VI3R@28216,COG1643@1,COG1643@2 NA|NA|NA L TIGRFAM ATP-dependent helicase HrpA MAG.C3.5_00270 1123393.KB891316_gene1604 1.8e-141 508.8 Hydrogenophilales Bacteria 1KRZ3@119069,1R7HC@1224,2W90N@28216,COG2199@1,COG3706@2 NA|NA|NA T diguanylate cyclase MAG.C3.5_00271 1122236.KB905141_gene1162 3.9e-66 257.7 Nitrosomonadales yqhA Bacteria 1RANN@1224,2KMMY@206350,2VK3P@28216,COG2862@1,COG2862@2 NA|NA|NA S UPF0114 protein MAG.C3.5_00272 1255043.TVNIR_1300 3e-46 191.8 Gammaproteobacteria Bacteria 1RJ22@1224,1T5AV@1236,COG3437@1,COG3437@2 NA|NA|NA KT HD domain MAG.C3.5_00273 582744.Msip34_0888 4.5e-151 540.8 Nitrosomonadales cobW Bacteria 1MVZV@1224,2KKPS@206350,2VIHH@28216,COG0523@1,COG0523@2 NA|NA|NA S PFAM cobalamin synthesis protein MAG.C3.5_00274 211586.SO_2199 2.5e-11 76.3 Shewanellaceae Bacteria 1N7AR@1224,1SG7N@1236,2QEHD@267890,COG3637@1,COG3637@2 NA|NA|NA M Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety MAG.C3.5_00275 748247.AZKH_4524 7.3e-16 91.3 Rhodocyclales avxIA Bacteria 1MU7T@1224,2KZTM@206389,2VNQ5@28216,COG2931@1,COG2931@2 NA|NA|NA Q Haemolysin-type calcium-binding repeat (2 copies) MAG.C3.5_00276 582744.Msip34_0461 3.6e-141 507.7 Nitrosomonadales murC GO:0000166,GO:0000270,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008763,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034645,GO:0035639,GO:0036094,GO:0042546,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0046872,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.45,6.3.2.8 ko:K01924,ko:K02558 ko00471,ko00550,ko01100,map00471,map00550,map01100 R03193 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 iECP_1309.ECP_0093,iJN678.murC Bacteria 1MV68@1224,2KMBW@206350,2VIKZ@28216,COG0773@1,COG0773@2 NA|NA|NA M Belongs to the MurCDEF family MAG.C3.5_00277 582744.Msip34_0462 9.3e-124 449.9 Nitrosomonadales murB GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008762,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0055114,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 1.3.1.98,6.3.2.4 ko:K00075,ko:K01921 ko00473,ko00520,ko00550,ko01100,ko01502,map00473,map00520,map00550,map01100,map01502 R01150,R03191,R03192 RC00064,RC00141,RC02639 ko00000,ko00001,ko01000,ko01011 Bacteria 1MXDH@1224,2KKDP@206350,2VI7I@28216,COG0812@1,COG0812@2 NA|NA|NA M Cell wall formation MAG.C3.5_00278 582744.Msip34_0463 3e-146 524.6 Nitrosomonadales ddl GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008716,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 1.3.1.98,6.3.2.4 ko:K00075,ko:K01921 ko00473,ko00520,ko00550,ko01100,ko01502,map00473,map00520,map00550,map01100,map01502 R01150,R03191,R03192 RC00064,RC00141,RC02639 ko00000,ko00001,ko01000,ko01011 iECO26_1355.ECO26_0095 Bacteria 1MUTB@1224,2KKG2@206350,2VHIW@28216,COG1181@1,COG1181@2 NA|NA|NA M Cell wall formation MAG.C3.5_00279 582744.Msip34_0464 2.2e-102 378.6 Nitrosomonadales ftsQ GO:0000003,GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0019954,GO:0022402,GO:0022414,GO:0022607,GO:0031224,GO:0031226,GO:0032153,GO:0032505,GO:0032506,GO:0042802,GO:0043093,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0071944,GO:0090529,GO:1902410,GO:1903047 6.3.2.4 ko:K01921,ko:K03589 ko00473,ko00550,ko01100,ko01502,ko04112,map00473,map00550,map01100,map01502,map04112 R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011,ko03036 Bacteria 1N0T7@1224,2KKS9@206350,2VRMV@28216,COG1589@1,COG1589@2 NA|NA|NA D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly MAG.C3.5_00280 582744.Msip34_0465 5.6e-212 743.4 Nitrosomonadales ftsA GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0030554,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 ko:K03590 ko04112,map04112 ko00000,ko00001,ko03036,ko04812 Bacteria 1MUSR@1224,2KKH3@206350,2VGZP@28216,COG0849@1,COG0849@2 NA|NA|NA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring MAG.C3.5_00281 582744.Msip34_0466 5.3e-196 690.3 Nitrosomonadales ftsZ GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022607,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034622,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044464,GO:0051258,GO:0051301,GO:0065003,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Bacteria 1MV2X@1224,2KKNM@206350,2VH0S@28216,COG0206@1,COG0206@2 NA|NA|NA D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity MAG.C3.5_00282 582744.Msip34_0467 4.9e-152 543.9 Nitrosomonadales lpxC GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0008654,GO:0008759,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.5.1.108,4.2.1.59 ko:K02535,ko:K16363 ko00061,ko00540,ko01100,ko01212,map00061,map00540,map01100,map01212 M00060,M00083 R04428,R04535,R04537,R04544,R04568,R04587,R04954,R04965 RC00166,RC00300,RC00831,RC01095 ko00000,ko00001,ko00002,ko01000,ko01004,ko01005 iECS88_1305.ECS88_0100 Bacteria 1MV6T@1224,2KKCT@206350,2VHI8@28216,COG0774@1,COG0774@2 NA|NA|NA M Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis MAG.C3.5_00283 582744.Msip34_0469 1.9e-241 842.0 Nitrosomonadales slt GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009274,GO:0016740,GO:0016757,GO:0030203,GO:0030288,GO:0030312,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 ko:K08309 ko00000,ko01000,ko01011 GH23 iETEC_1333.ETEC_4747,iPC815.YPO0452 Bacteria 1MV3F@1224,2KKTQ@206350,2VHPK@28216,COG0741@1,COG0741@2 NA|NA|NA M Soluble lytic murein transglycosylase L domain MAG.C3.5_00284 582744.Msip34_0470 8.3e-131 473.4 Nitrosomonadales 1.6.5.3,1.6.99.3 ko:K00329,ko:K00356 ko00190,map00190 R11945 RC00061 ko00000,ko00001,ko01000 Bacteria 1MW54@1224,2KMG6@206350,2VIBZ@28216,COG0702@1,COG0702@2 NA|NA|NA GM Saccharopine dehydrogenase NADP binding domain MAG.C3.5_00285 666681.M301_2412 3.2e-183 647.9 Nitrosomonadales cca 2.7.7.19,2.7.7.72 ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 R09382,R09383,R09384,R09386 RC00078 ko00000,ko00001,ko01000,ko03016,ko03019 Bacteria 1MU2X@1224,2KKXV@206350,2VIN5@28216,COG0617@1,COG0617@2 NA|NA|NA J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases MAG.C3.5_00286 1165096.ARWF01000001_gene2049 1.1e-29 136.3 Betaproteobacteria Bacteria 1RIFX@1224,2ATZM@1,2VSS3@28216,31JJE@2 NA|NA|NA MAG.C3.5_00287 1165096.ARWF01000001_gene1062 8.8e-177 626.7 Nitrosomonadales Bacteria 1MWXZ@1224,2KP5P@206350,2VN35@28216,COG0477@1,COG0477@2 NA|NA|NA EGP Major Facilitator Superfamily MAG.C3.5_00288 207954.MED92_09586 3.3e-24 118.6 Bacteria Bacteria COG4254@1,COG4254@2 NA|NA|NA UW PFAM FecR protein MAG.C3.5_00290 1249627.D779_4021 3.6e-23 114.8 Gammaproteobacteria Bacteria 1R9Z5@1224,1SIBQ@1236,2DJGJ@1,32UD0@2 NA|NA|NA MAG.C3.5_00291 265072.Mfla_2257 2.1e-54 218.4 Nitrosomonadales slmA GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0000918,GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0007049,GO:0007346,GO:0008150,GO:0009295,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0010564,GO:0010948,GO:0010974,GO:0016043,GO:0019219,GO:0019222,GO:0022402,GO:0022607,GO:0031323,GO:0031326,GO:0031333,GO:0032271,GO:0032272,GO:0032465,GO:0032466,GO:0032506,GO:0032954,GO:0032955,GO:0042802,GO:0043085,GO:0043087,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0043547,GO:0043565,GO:0043590,GO:0044085,GO:0044087,GO:0044093,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0045786,GO:0045930,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051252,GO:0051301,GO:0051302,GO:0051336,GO:0051345,GO:0051726,GO:0051782,GO:0060255,GO:0061640,GO:0065007,GO:0065009,GO:0071840,GO:0080090,GO:0090529,GO:0097159,GO:0140110,GO:1901363,GO:1901891,GO:1901892,GO:1902410,GO:1902412,GO:1902413,GO:1903047,GO:1903436,GO:1903437,GO:1903506,GO:1990837,GO:2000112,GO:2001141 ko:K05501 ko00000,ko03000,ko03036 Bacteria 1MWF7@1224,2KKDC@206350,2VQ4C@28216,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family MAG.C3.5_00292 265072.Mfla_0459 1.1e-151 542.7 Nitrosomonadales gltA 1.4.1.13,1.4.1.14,1.4.7.1,2.1.1.21 ko:K00265,ko:K00284,ko:K22083 ko00250,ko00630,ko00680,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00680,map00910,map01100,map01110,map01120,map01130,map01230 R00021,R00093,R00114,R00248,R01586,R10086 RC00006,RC00010,RC00554,RC02799 ko00000,ko00001,ko01000 Bacteria 1MU7B@1224,2KKH0@206350,2VKQG@28216,COG0069@1,COG0069@2 NA|NA|NA E Belongs to the glutamate synthase family MAG.C3.5_00294 666681.M301_1413 1.6e-24 118.6 Betaproteobacteria Bacteria 1NBAP@1224,2BYQZ@1,2VYS3@28216,3300Y@2 NA|NA|NA MAG.C3.5_00295 666681.M301_1412 1.1e-33 149.4 Betaproteobacteria Bacteria 1N21G@1224,2E0FK@1,2VU8B@28216,32W1S@2 NA|NA|NA MAG.C3.5_00296 1026882.MAMP_01171 1e-09 68.6 Bacteria Bacteria 2ENR6@1,33EH6@2 NA|NA|NA MAG.C3.5_00297 666681.M301_1410 3.4e-234 817.4 Proteobacteria ko:K16238 ko00000,ko02000 2.A.3.5 Bacteria 1MXNJ@1224,COG0531@1,COG0531@2 NA|NA|NA E amino acid MAG.C3.5_00298 1026882.MAMP_01167 9.5e-42 176.4 Gammaproteobacteria Bacteria 1MZ3K@1224,1SFMR@1236,COG0589@1,COG0589@2 NA|NA|NA T universal stress protein MAG.C3.5_00299 666681.M301_1409 1.6e-56 226.1 Betaproteobacteria Bacteria 1NAPM@1224,2E5NH@1,2VVYQ@28216,330DA@2 NA|NA|NA MAG.C3.5_00300 666681.M301_1408 6.4e-21 106.7 Betaproteobacteria Bacteria 1N7QE@1224,2E7VB@1,2VWXI@28216,332A5@2 NA|NA|NA MAG.C3.5_00301 666681.M301_0615 3.7e-108 397.9 Nitrosomonadales folE2 3.5.4.16 ko:K09007 ko00790,ko01100,map00790,map01100 M00126 R00428,R04639,R05046,R05048 RC00263,RC00294,RC00323,RC00945,RC01188 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV1B@1224,2KKMR@206350,2VIC9@28216,COG1469@1,COG1469@2 NA|NA|NA S Converts GTP to 7,8-dihydroneopterin triphosphate MAG.C3.5_00302 666681.M301_1406 6.8e-159 567.0 Nitrosomonadales ribB 3.5.4.25,4.1.99.12 ko:K02858,ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 M00125,M00840 R00425,R07281 RC00293,RC01792,RC01815,RC02504 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU8P@1224,2KNK2@206350,2VH6S@28216,COG0108@1,COG0108@2,COG0807@1,COG0807@2 NA|NA|NA H 3,4-dihydroxy-2-butanone 4-phosphate synthase MAG.C3.5_00303 204773.HEAR1490 3.2e-73 281.6 Oxalobacteraceae alkB GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008198,GO:0009451,GO:0009987,GO:0016070,GO:0016491,GO:0016705,GO:0016706,GO:0032451,GO:0033554,GO:0034641,GO:0035510,GO:0035511,GO:0035513,GO:0035515,GO:0035552,GO:0035553,GO:0042245,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043734,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0044728,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051213,GO:0051716,GO:0055114,GO:0070579,GO:0070988,GO:0070989,GO:0071704,GO:0080111,GO:0090304,GO:0140098,GO:1901360 1.14.11.33 ko:K03919 ko00000,ko01000,ko03400 Bacteria 1N5HB@1224,2VHNU@28216,4745M@75682,COG3145@1,COG3145@2 NA|NA|NA L repair protein MAG.C3.5_00304 272568.GDI0521 5.6e-62 244.2 Rhodospirillales alkA 2.1.1.63,3.2.2.21 ko:K00567,ko:K01247 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1MX9C@1224,2JX9Y@204441,2UA13@28211,COG0122@1,COG0122@2 NA|NA|NA L endonuclease III MAG.C3.5_00306 1502770.JQMG01000001_gene1719 5.3e-61 240.7 Nitrosomonadales bcpB 1.11.1.15 ko:K03564 ko00000,ko01000 Bacteria 1MWJP@1224,2KNTH@206350,2VQ0B@28216,COG1225@1,COG1225@2 NA|NA|NA O Redoxin MAG.C3.5_00307 640081.Dsui_1207 2.1e-58 234.2 Rhodocyclales avxIA Bacteria 1MU7T@1224,2KW9H@206389,2VHFJ@28216,COG2931@1,COG2931@2 NA|NA|NA Q Haemolysin-type calcium-binding repeat (2 copies) MAG.C3.5_00309 666681.M301_1404 1.8e-26 125.2 Nitrosomonadales Bacteria 1PJUX@1224,2A8WP@1,2KP2J@206350,2W86R@28216,30Y02@2 NA|NA|NA MAG.C3.5_00310 666681.M301_1403 7e-171 606.7 Nitrosomonadales Bacteria 1MZX4@1224,2KNJK@206350,2VZKU@28216,COG0697@1,COG0697@2 NA|NA|NA EG spore germination MAG.C3.5_00311 666681.M301_1402 1.2e-52 212.6 Betaproteobacteria yjbI ko:K06886 ko00000 Bacteria 1RH21@1224,2VUYA@28216,COG2346@1,COG2346@2 NA|NA|NA S Bacterial-like globin MAG.C3.5_00312 666681.M301_1401 1.4e-280 971.8 Nitrosomonadales Bacteria 1MY59@1224,2KKQG@206350,2VKNY@28216,COG0531@1,COG0531@2 NA|NA|NA E Amino acid permease MAG.C3.5_00313 582744.Msip34_0651 3.4e-236 823.9 Nitrosomonadales glnS GO:0003674,GO:0003824,GO:0004812,GO:0004819,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006425,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.18 ko:K01886 ko00970,ko01100,map00970,map01100 M00359,M00360 R03652 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iECIAI39_1322.ECIAI39_0637 Bacteria 1MUC8@1224,2KKQ1@206350,2VHZX@28216,COG0008@1,COG0008@2 NA|NA|NA J TIGRFAM glutaminyl-tRNA synthetase MAG.C3.5_00314 375286.mma_0578 1.5e-56 226.5 Oxalobacteraceae dam GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006281,GO:0006298,GO:0006304,GO:0006305,GO:0006306,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007049,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0009007,GO:0009008,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016740,GO:0016741,GO:0022402,GO:0032259,GO:0032775,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0043412,GO:0043414,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044728,GO:0044786,GO:0044787,GO:0046483,GO:0048037,GO:0050662,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901576,GO:1901681,GO:1902292,GO:1902328,GO:1904047 2.1.1.37,2.1.1.72 ko:K00558,ko:K06223 ko00270,ko01100,ko03430,ko05206,map00270,map01100,map03430,map05206 M00035 R04858 RC00003,RC00332 ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036,ko03400 Bacteria 1P85S@1224,2VKN7@28216,4755G@75682,COG0338@1,COG0338@2 NA|NA|NA H D12 class N6 adenine-specific DNA methyltransferase MAG.C3.5_00315 395965.Msil_2175 7.3e-47 194.5 Proteobacteria ko:K03497 ko00000,ko03000,ko03036,ko04812 Bacteria 1N7UQ@1224,COG1475@1,COG1475@2 NA|NA|NA K ParB-like nuclease domain MAG.C3.5_00317 1502770.JQMG01000001_gene177 3.3e-82 311.2 Nitrosomonadales Bacteria 1NB1B@1224,2KM4U@206350,2VQ0V@28216,COG1853@1,COG1853@2 NA|NA|NA S PFAM flavin reductase domain protein FMN-binding MAG.C3.5_00318 1132855.KB913035_gene1963 6.1e-144 517.3 Betaproteobacteria macA ko:K02005,ko:K13888 M00709 ko00000,ko00002,ko02000 8.A.1 Bacteria 1MU8D@1224,2VJR5@28216,COG0845@1,COG0845@2 NA|NA|NA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family MAG.C3.5_00319 159087.Daro_3462 3.1e-90 338.2 Rhodocyclales macB ko:K02003,ko:K05685 ko02010,map02010 M00258,M00709 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1,3.A.1.122.1,3.A.1.122.12 Bacteria 1MU45@1224,2KVSB@206389,2VJBY@28216,COG1136@1,COG1136@2 NA|NA|NA V ATPases associated with a variety of cellular activities MAG.C3.5_00320 1132855.KB913035_gene1961 4.1e-153 547.7 Nitrosomonadales yhcA ko:K02003,ko:K02004,ko:K05685 ko02010,map02010 M00258,M00709 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1,3.A.1.122.1,3.A.1.122.12 Bacteria 1PBKH@1224,2KP41@206350,2VIIH@28216,COG0577@1,COG0577@2 NA|NA|NA V MacB-like periplasmic core domain MAG.C3.5_00321 583345.Mmol_0788 1.7e-152 545.8 Nitrosomonadales yhcA ko:K02003,ko:K02004,ko:K05685 ko02010,map02010 M00258,M00709 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1,3.A.1.122.1,3.A.1.122.12 Bacteria 1PBKH@1224,2KP42@206350,2VKXU@28216,COG0577@1,COG0577@2 NA|NA|NA V MacB-like periplasmic core domain MAG.C3.5_00322 582744.Msip34_0648 9.3e-143 513.1 Nitrosomonadales cysK GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 ko:K01738 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 M00021 R00897,R03601,R04859 RC00020,RC02814,RC02821 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUBE@1224,2KMBQ@206350,2VJI3@28216,COG0031@1,COG0031@2 NA|NA|NA E Belongs to the cysteine synthase cystathionine beta- synthase family MAG.C3.5_00323 583345.Mmol_0666 1.1e-129 469.9 Nitrosomonadales corA GO:0000041,GO:0000287,GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006824,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015087,GO:0015095,GO:0015318,GO:0015693,GO:0016020,GO:0016021,GO:0016043,GO:0022607,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0042802,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046873,GO:0046914,GO:0046915,GO:0050897,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0055085,GO:0065003,GO:0070838,GO:0071840,GO:0071944,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:1903830 ko:K03284 ko00000,ko02000 1.A.35.1,1.A.35.3 Bacteria 1MX09@1224,2KKEF@206350,2VHCH@28216,COG0598@1,COG0598@2 NA|NA|NA P Mediates influx of magnesium ions MAG.C3.5_00324 582744.Msip34_0649 4.7e-60 239.6 Nitrosomonadales fimV ko:K08086 ko00000 Bacteria 1MXV7@1224,2KMD2@206350,2VHX1@28216,COG3170@1,COG3170@2 NA|NA|NA NU pilus assembly protein FimV MAG.C3.5_00325 1132855.KB913035_gene1028 1.1e-76 292.7 Nitrosomonadales msrA 1.8.4.11 ko:K07304 ko00000,ko01000 Bacteria 1MVUS@1224,2KMMF@206350,2VR6F@28216,COG0225@1,COG0225@2 NA|NA|NA O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine MAG.C3.5_00326 1132855.KB913035_gene1029 1.7e-155 555.8 Nitrosomonadales 2.7.7.7 ko:K02346 ko00000,ko01000,ko03400 Bacteria 1MUUH@1224,2KMEY@206350,2VNAY@28216,COG0389@1,COG0389@2 NA|NA|NA L impB/mucB/samB family MAG.C3.5_00327 265072.Mfla_2086 8.3e-89 333.6 Nitrosomonadales parA ko:K03496 ko00000,ko03036,ko04812 Bacteria 1N3GB@1224,2KMUJ@206350,2VSGK@28216,COG1192@1,COG1192@2 NA|NA|NA D AAA domain MAG.C3.5_00328 582744.Msip34_0644 9.3e-17 92.4 Nitrosomonadales Bacteria 1P4G2@1224,2CA46@1,2KP1D@206350,2W6FA@28216,2ZEVF@2 NA|NA|NA MAG.C3.5_00332 582744.Msip34_0294 0.0 2025.0 Nitrosomonadales rpoB GO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 ko:K03043,ko:K13797 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Bacteria 1MUC4@1224,2KM9G@206350,2VHF3@28216,COG0085@1,COG0085@2 NA|NA|NA K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates MAG.C3.5_00333 1165096.ARWF01000001_gene2364 7.7e-115 420.2 Nitrosomonadales citE 3.1.2.30,4.1.3.25,4.1.3.34 ko:K01644,ko:K14451,ko:K18292 ko00630,ko00660,ko01100,ko01120,ko01200,ko02020,map00630,map00660,map01100,map01120,map01200,map02020 M00373 R00237,R00362,R10612 RC00004,RC00014,RC00067,RC00502,RC01118,RC01205 ko00000,ko00001,ko00002,ko01000 Bacteria 1MW0A@1224,2KMIY@206350,2VQR0@28216,COG2301@1,COG2301@2 NA|NA|NA G Belongs to the HpcH HpaI aldolase family MAG.C3.5_00334 395494.Galf_0005 5.7e-144 517.3 Betaproteobacteria mch GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006083,GO:0008150,GO:0008152,GO:0009056,GO:0009436,GO:0009987,GO:0015977,GO:0016054,GO:0016829,GO:0016830,GO:0016833,GO:0016999,GO:0017001,GO:0017144,GO:0019752,GO:0032787,GO:0043427,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0045733,GO:0046185,GO:0046395,GO:0046487,GO:0071704,GO:0072329,GO:1901575 4.2.1.148 ko:K07068,ko:K14449 ko00630,ko00660,ko00720,ko01120,ko01200,map00630,map00660,map00720,map01120,map01200 M00373,M00376,M00740 R05076 RC01984 ko00000,ko00001,ko00002,ko01000 Bacteria 1MW4N@1224,2VJZM@28216,COG2030@1,COG2030@2 NA|NA|NA I PFAM MaoC domain protein dehydratase MAG.C3.5_00335 1122236.KB905141_gene636 4.7e-153 547.4 Nitrosomonadales citE 4.1.3.25,4.1.3.34 ko:K01644,ko:K18292 ko00660,ko01100,ko02020,map00660,map01100,map02020 R00237,R00362 RC00067,RC00502,RC01118,RC01205 ko00000,ko00001,ko01000 Bacteria 1Q91U@1224,2KM2P@206350,2VJJY@28216,COG2301@1,COG2301@2 NA|NA|NA G Belongs to the HpcH HpaI aldolase family MAG.C3.5_00336 1132855.KB913035_gene2056 8.3e-133 479.9 Nitrosomonadales prpB 4.1.3.30 ko:K03417 ko00640,map00640 R00409 RC00286,RC00287 ko00000,ko00001,ko01000 Bacteria 1N4VT@1224,2KM4V@206350,2VI8S@28216,COG2513@1,COG2513@2 NA|NA|NA G Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate MAG.C3.5_00337 1122236.KB905146_gene1967 0.0 1155.6 Nitrosomonadales Bacteria 1MUQX@1224,2KMEC@206350,2VHVH@28216,COG4993@1,COG4993@2 NA|NA|NA G TIGRFAM PQQ-dependent dehydrogenase, methanol ethanol family MAG.C3.5_00339 1454004.AW11_03578 1.7e-55 223.4 Proteobacteria lytM Bacteria 1N19D@1224,COG0739@1,COG0739@2 NA|NA|NA M peptidase MAG.C3.5_00340 666681.M301_2721 3.2e-64 251.5 Nitrosomonadales ribA 3.5.4.25,4.1.99.12 ko:K01497,ko:K14652 ko00740,ko00790,ko01100,ko01110,ko02024,map00740,map00790,map01100,map01110,map02024 M00125,M00840 R00425,R07281 RC00293,RC01792,RC01815,RC02504 ko00000,ko00001,ko00002,ko01000 Bacteria 1MWZR@1224,2KMKQ@206350,2VRA8@28216,COG0807@1,COG0807@2 NA|NA|NA H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate MAG.C3.5_00341 395493.BegalDRAFT_0395 3.1e-124 452.6 Gammaproteobacteria 4.6.1.1 ko:K01768 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000 Bacteria 1RDES@1224,1S0RQ@1236,COG2114@1,COG2114@2,COG5000@1,COG5000@2 NA|NA|NA T Adenylyl- / guanylyl cyclase, catalytic domain MAG.C3.5_00343 640081.Dsui_1207 3.5e-66 260.0 Rhodocyclales avxIA Bacteria 1MU7T@1224,2KW9H@206389,2VHFJ@28216,COG2931@1,COG2931@2 NA|NA|NA Q Haemolysin-type calcium-binding repeat (2 copies) MAG.C3.5_00344 666681.M301_1400 7.7e-42 176.0 Nitrosomonadales pds 1.3.1.2,1.3.1.31,1.3.1.34,1.3.5.5,1.5.8.1,1.5.8.2 ko:K00207,ko:K00219,ko:K00317,ko:K02293,ko:K10797,ko:K21833 ko00240,ko00360,ko00410,ko00680,ko00770,ko00906,ko00983,ko01100,ko01110,ko01120,ko01200,map00240,map00360,map00410,map00680,map00770,map00906,map00983,map01100,map01110,map01120,map01200 M00046,M00097 R00978,R01415,R01588,R02252,R02511,R04786,R04787,R07510,R08226,R09652,R09653,R09654 RC00072,RC00123,RC00185,RC00556,RC00557,RC00669,RC00732,RC01214,RC01958,RC02245,RC03092,RC03093 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVE0@1224,2KM7C@206350,2VJ6V@28216,COG0493@1,COG0493@2,COG1902@1,COG1902@2 NA|NA|NA CE PFAM NADH flavin oxidoreductase NADH oxidase MAG.C3.5_00345 381666.H16_B0951 7.8e-28 130.2 Betaproteobacteria 1.14.12.17 ko:K05916 ko05132,map05132 ko00000,ko00001,ko01000 Bacteria 1QVJP@1224,2VV2W@28216,COG1017@1,COG1017@2 NA|NA|NA C Belongs to the globin family MAG.C3.5_00347 582744.Msip34_0912 1.8e-20 104.8 Nitrosomonadales feoA ko:K04758 ko00000,ko02000 Bacteria 1NA6D@1224,2KN7T@206350,2VY9N@28216,COG1918@1,COG1918@2 NA|NA|NA P PFAM FeoA family protein MAG.C3.5_00348 1236959.BAMT01000003_gene536 4.9e-193 681.0 Nitrosomonadales Bacteria 1MUHZ@1224,2KNJR@206350,2VH5R@28216,COG3975@1,COG3975@2 NA|NA|NA S M61 glycyl aminopeptidase MAG.C3.5_00349 118173.KB235914_gene2199 5.2e-103 381.3 Oscillatoriales cefD 5.1.1.17 ko:K04127,ko:K11325,ko:K21174 ko00311,ko01059,ko01100,ko01130,map00311,map01059,map01100,map01130 M00673,M00825 R04147 RC00302 ko00000,ko00001,ko00002,ko01000 Bacteria 1G0VG@1117,1H95T@1150,COG0520@1,COG0520@2 NA|NA|NA E Selenocysteine lyase MAG.C3.5_00350 265072.Mfla_1881 2e-101 375.6 Nitrosomonadales ppiC 5.2.1.8 ko:K01802,ko:K03769,ko:K07533 ko00000,ko01000,ko03110 Bacteria 1MZDK@1224,2KKBZ@206350,2VJZP@28216,COG0760@1,COG0760@2 NA|NA|NA M PFAM PpiC-type peptidyl-prolyl cis-trans isomerase MAG.C3.5_00351 1502770.JQMG01000001_gene156 6.7e-27 126.3 Nitrosomonadales bolA ko:K05527,ko:K09780 ko00000,ko03000 Bacteria 1MZG5@1224,2KN9P@206350,2VVNP@28216,COG0271@1,COG0271@2 NA|NA|NA T Belongs to the BolA IbaG family MAG.C3.5_00352 1236959.BAMT01000003_gene540 3.4e-38 164.1 Nitrosomonadales yciI GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K05527,ko:K09780 ko00000,ko03000 Bacteria 1MZ9Z@1224,2KN2X@206350,2VUM7@28216,COG2350@1,COG2350@2 NA|NA|NA S YCII-related domain MAG.C3.5_00353 265072.Mfla_1878 4e-66 257.7 Nitrosomonadales ispZ GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 ko:K06190 ko00000 Bacteria 1NWIZ@1224,2KMUD@206350,2VRHB@28216,COG2917@1,COG2917@2 NA|NA|NA D probably involved in intracellular septation MAG.C3.5_00354 265072.Mfla_0864 1.6e-93 349.0 Nitrosomonadales era GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009898,GO:0009987,GO:0016020,GO:0016310,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0019843,GO:0019897,GO:0019898,GO:0022613,GO:0031234,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0036211,GO:0042254,GO:0042274,GO:0043021,GO:0043024,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044877,GO:0046777,GO:0070181,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363,GO:1901564 ko:K03595 ko00000,ko03009,ko03029 Bacteria 1MUKT@1224,2KM1D@206350,2VHYP@28216,COG1159@1,COG1159@2 NA|NA|NA S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism MAG.C3.5_00355 582744.Msip34_1778 2.7e-97 361.7 Nitrosomonadales recO GO:0008150,GO:0009314,GO:0009628,GO:0050896 2.6.99.2 ko:K03474,ko:K03584 ko00750,ko01100,ko03440,map00750,map01100,map03440 M00124 R05838 RC01476 ko00000,ko00001,ko00002,ko01000,ko03400 Bacteria 1RHIC@1224,2KM7I@206350,2VJUC@28216,COG1381@1,COG1381@2 NA|NA|NA L Involved in DNA repair and RecF pathway recombination MAG.C3.5_00356 582744.Msip34_1777 5.4e-106 390.6 Nitrosomonadales pdxJ GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 ko:K03474 ko00750,ko01100,map00750,map01100 M00124 R05838 RC01476 ko00000,ko00001,ko00002,ko01000 iAF1260.b2564,iAF987.Gmet_1885,iB21_1397.B21_02422,iBWG_1329.BWG_2328,iEC55989_1330.EC55989_2852,iECBD_1354.ECBD_1117,iECB_1328.ECB_02458,iECDH10B_1368.ECDH10B_2732,iECDH1ME8569_1439.ECDH1ME8569_2491,iECD_1391.ECD_02458,iECH74115_1262.ECH74115_3800,iECIAI1_1343.ECIAI1_2675,iECO103_1326.ECO103_3142,iECO111_1330.ECO111_3290,iECO26_1355.ECO26_3611,iECSE_1348.ECSE_2852,iECSP_1301.ECSP_3509,iECW_1372.ECW_m2792,iECs_1301.ECs3430,iEKO11_1354.EKO11_1169,iEcDH1_1363.EcDH1_1104,iEcE24377_1341.EcE24377A_2850,iEcHS_1320.EcHS_A2719,iEcolC_1368.EcolC_1113,iG2583_1286.G2583_3145,iJO1366.b2564,iJR904.b2564,iWFL_1372.ECW_m2792,iY75_1357.Y75_RS13390 Bacteria 1MU9W@1224,2KM6J@206350,2VHY7@28216,COG0854@1,COG0854@2 NA|NA|NA H Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate MAG.C3.5_00357 582744.Msip34_1776 1.1e-41 176.0 Nitrosomonadales acpS GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008897,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016780,GO:0018070,GO:0018193,GO:0018209,GO:0018215,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901564,GO:1901576 2.7.8.7,3.2.1.52 ko:K00997,ko:K01207 ko00520,ko00531,ko00770,ko01100,ko01501,map00520,map00531,map00770,map01100,map01501 M00628 R00022,R01625,R05963,R07809,R07810,R10831 RC00002,RC00049 ko00000,ko00001,ko00002,ko01000 Bacteria 1MZBF@1224,2KMWX@206350,2VT0P@28216,COG0736@1,COG0736@2 NA|NA|NA I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein MAG.C3.5_00358 582744.Msip34_1775 6.7e-53 214.5 Nitrosomonadales Bacteria 1QCSR@1224,2B3ND@1,2KNX9@206350,2W84G@28216,31WBT@2 NA|NA|NA MAG.C3.5_00359 1502770.JQMG01000001_gene1573 3.1e-96 358.2 Nitrosomonadales ygdL GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016829,GO:0016835,GO:0016836,GO:0030955,GO:0031402,GO:0031420,GO:0034470,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0061503,GO:0061504,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.7.7.73,2.7.7.80 ko:K03148,ko:K21029,ko:K22132 ko00730,ko01100,ko04122,map00730,map01100,map04122 R07459 RC00043 ko00000,ko00001,ko01000,ko03016 Bacteria 1MWXR@1224,2KMCE@206350,2VJPP@28216,COG1179@1,COG1179@2 NA|NA|NA H PFAM UBA THIF-type NAD FAD binding protein MAG.C3.5_00361 666681.M301_2218 8.2e-09 65.5 Nitrosomonadales uca 6.3.4.14,6.3.4.6,6.4.1.1,6.4.1.2 ko:K01941,ko:K01959,ko:K01961 ko00020,ko00061,ko00220,ko00620,ko00640,ko00720,ko00791,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko01230,map00020,map00061,map00220,map00620,map00640,map00720,map00791,map01100,map01110,map01120,map01130,map01200,map01212,map01230 M00082,M00173,M00376,M00620 R00344,R00742,R00774,R04385 RC00040,RC00253,RC00367,RC00378 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU4H@1224,2KNIP@206350,2WGI2@28216,COG0439@1,COG0439@2,COG1984@1,COG1984@2,COG2049@1,COG2049@2 NA|NA|NA C Carbamoyl-phosphate synthetase large chain domain protein MAG.C3.5_00362 666681.M301_2217 4.3e-189 667.5 Nitrosomonadales atzF 3.5.1.4,3.5.1.54 ko:K01426,ko:K01457 ko00220,ko00330,ko00360,ko00380,ko00627,ko00643,ko00791,ko01100,ko01120,map00220,map00330,map00360,map00380,map00627,map00643,map00791,map01100,map01120 R00005,R02540,R03096,R03180,R03909,R05551,R05590 RC00010,RC00100,RC00950,RC01025,RC02756 ko00000,ko00001,ko01000 Bacteria 1MUVQ@1224,2KKBX@206350,2VIG3@28216,COG0154@1,COG0154@2 NA|NA|NA J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) MAG.C3.5_00363 709032.Sulku_0131 1.6e-38 165.6 Epsilonproteobacteria atzF 3.5.1.4,3.5.1.54 ko:K01426,ko:K01457 ko00220,ko00330,ko00360,ko00380,ko00627,ko00643,ko00791,ko01100,ko01120,map00220,map00330,map00360,map00380,map00627,map00643,map00791,map01100,map01120 R00005,R02540,R03096,R03180,R03909,R05551,R05590 RC00010,RC00100,RC00950,RC01025,RC02756 ko00000,ko00001,ko01000 Bacteria 1MUVQ@1224,2YMS5@29547,42PK7@68525,COG0154@1,COG0154@2 NA|NA|NA J Amidase MAG.C3.5_00364 582744.Msip34_0956 2.2e-209 734.9 Proteobacteria eat ko:K16238 ko00000,ko02000 2.A.3.5 Bacteria 1QUC6@1224,COG1113@1,COG1113@2 NA|NA|NA E amino acid MAG.C3.5_00365 582744.Msip34_0957 7.7e-234 816.2 Nitrosomonadales eutB 4.3.1.7 ko:K03735 ko00564,ko01100,map00564,map01100 R00749 RC00370 ko00000,ko00001,ko01000 Bacteria 1MUR4@1224,2KNEH@206350,2VIJW@28216,COG4303@1,COG4303@2 NA|NA|NA E PFAM Ethanolamine ammonia lyase large subunit MAG.C3.5_00366 666681.M301_2691 1.8e-99 369.0 Nitrosomonadales eutC GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0008144,GO:0009350,GO:0019842,GO:0031419,GO:0032991,GO:0036094,GO:0044424,GO:0044464,GO:0046906,GO:0048037,GO:0097159,GO:1901363,GO:1902494 4.3.1.7 ko:K03736 ko00564,ko01100,map00564,map01100 R00749 RC00370 ko00000,ko00001,ko01000 Bacteria 1MWQI@1224,2KNF8@206350,2VJ8Y@28216,COG4302@1,COG4302@2 NA|NA|NA H PFAM Ethanolamine ammonia-lyase light chain MAG.C3.5_00367 582744.Msip34_0961 1.8e-83 316.2 Nitrosomonadales ko:K04033 ko00000,ko03000 Bacteria 1Q3UX@1224,2KN8B@206350,2VT4I@28216,COG2207@1,COG2207@2 NA|NA|NA K SMART helix-turn-helix- domain containing protein AraC type MAG.C3.5_00368 582744.Msip34_0962 8.8e-195 686.4 Nitrosomonadales rlmD GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0070041,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.190 ko:K03215 ko00000,ko01000,ko03009 Bacteria 1MV3A@1224,2KKG7@206350,2VHJ8@28216,COG2265@1,COG2265@2 NA|NA|NA J Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA MAG.C3.5_00370 265072.Mfla_1850 5.6e-171 607.4 Nitrosomonadales appA ko:K02035 ko02024,map02024 M00239 ko00000,ko00001,ko00002,ko02000 3.A.1.5 Bacteria 1MUZH@1224,2KM4S@206350,2VHCV@28216,COG0747@1,COG0747@2 NA|NA|NA E PFAM extracellular solute-binding protein family 5 MAG.C3.5_00371 582744.Msip34_0966 1.2e-56 226.1 Nitrosomonadales erfK Bacteria 1RHBG@1224,2KMQ4@206350,2VQT7@28216,COG1376@1,COG1376@2 NA|NA|NA S PFAM ErfK YbiS YcfS YnhG family protein MAG.C3.5_00372 265072.Mfla_1848 1.8e-119 435.6 Nitrosomonadales ko:K02033 ko02024,map02024 M00239 ko00000,ko00001,ko00002,ko02000 3.A.1.5 Bacteria 1MU8Z@1224,2KP5S@206350,2VJJU@28216,COG0601@1,COG0601@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component MAG.C3.5_00373 1236959.BAMT01000003_gene579 6.9e-99 367.1 Nitrosomonadales dppC ko:K02034 ko02024,map02024 M00239 ko00000,ko00001,ko00002,ko02000 3.A.1.5 Bacteria 1MW3R@1224,2KM6B@206350,2W24J@28216,COG1173@1,COG1173@2 NA|NA|NA P PFAM binding-protein-dependent transport systems inner membrane component MAG.C3.5_00374 582744.Msip34_0969 2.1e-102 378.6 Nitrosomonadales yhhQ ko:K09125 ko00000 Bacteria 1NIPE@1224,2KM8N@206350,2VH6D@28216,COG1738@1,COG1738@2 NA|NA|NA S Involved in the import of queuosine (Q) precursors, required for Q precursor salvage MAG.C3.5_00375 582744.Msip34_0970 6.1e-167 593.6 Nitrosomonadales nagZ GO:0000270,GO:0003674,GO:0003824,GO:0004553,GO:0004563,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006807,GO:0008150,GO:0008152,GO:0009254,GO:0009273,GO:0009987,GO:0015929,GO:0016787,GO:0016798,GO:0030203,GO:0042546,GO:0043170,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901564 2.7.8.7,3.2.1.21,3.2.1.52 ko:K00997,ko:K01207,ko:K05349 ko00460,ko00500,ko00520,ko00531,ko00770,ko00940,ko01100,ko01110,ko01501,map00460,map00500,map00520,map00531,map00770,map00940,map01100,map01110,map01501 M00628 R00022,R00026,R01625,R02558,R02887,R02985,R03527,R04949,R04998,R05963,R07809,R07810,R10035,R10039,R10040,R10831 RC00002,RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko00002,ko01000 GH3 iSFV_1184.SFV_1127,iUMN146_1321.UM146_11790 Bacteria 1MVAJ@1224,2KKJB@206350,2VHAR@28216,COG1472@1,COG1472@2 NA|NA|NA G Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides MAG.C3.5_00376 582744.Msip34_0971 6.7e-90 337.0 Nitrosomonadales yccA ko:K06890,ko:K19416 M00742 ko00000,ko00002,ko02000 1.A.14.2.1 Bacteria 1MU69@1224,2KMJ9@206350,2VKZV@28216,COG0670@1,COG0670@2 NA|NA|NA S Belongs to the BI1 family MAG.C3.5_00377 1236959.BAMT01000007_gene2736 1.7e-101 375.9 Nitrosomonadales Z012_00845 Bacteria 1N0C1@1224,2KKY3@206350,2VM51@28216,COG0583@1,COG0583@2 NA|NA|NA K Transcriptional regulator, LysR family MAG.C3.5_00378 1502770.JQMG01000001_gene1434 1.9e-72 278.5 Nitrosomonadales iorA 1.3.99.16 ko:K07302,ko:K07303 ko00000,ko01000 Bacteria 1RD8C@1224,2KMW6@206350,2VQ9M@28216,COG2080@1,COG2080@2 NA|NA|NA C PFAM 2Fe-2S -binding domain protein MAG.C3.5_00379 666681.M301_2578 6.8e-89 333.6 Nitrosomonadales trpD GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 ko:K00766,ko:K13497 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R00985,R00986,R01073 RC00010,RC00440,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 iJN746.PP_0421 Bacteria 1MUPV@1224,2KKHQ@206350,2VH7F@28216,COG0547@1,COG0547@2 NA|NA|NA E Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) MAG.C3.5_00380 398579.Spea_3432 1.1e-40 172.9 Shewanellaceae ko:K02067 ko02010,map02010 M00210,M00669,M00670 ko00000,ko00001,ko00002,ko02000 3.A.1.27 Bacteria 1RHH6@1224,1S74Q@1236,2QBT4@267890,COG1463@1,COG1463@2 NA|NA|NA Q Protein of unknown function (DUF3465) MAG.C3.5_00381 59538.XP_005976933.1 5.3e-107 394.0 Bilateria Metazoa 38FIR@33154,3BUYE@33208,3DFBG@33213,COG0134@1,KOG4201@2759 NA|NA|NA E Indole-3-glycerol phosphate synthase MAG.C3.5_00382 1101195.Meth11DRAFT_2505 6.1e-177 626.7 Nitrosomonadales hemB GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 ko:K01698 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R00036 RC00918,RC01781 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1MWMW@1224,2KMIF@206350,2VHC6@28216,COG0113@1,COG0113@2 NA|NA|NA H Belongs to the ALAD family MAG.C3.5_00383 1163617.SCD_n02938 4.6e-47 194.9 Betaproteobacteria ycgR Bacteria 1MX00@1224,2VQEK@28216,COG5581@1,COG5581@2 NA|NA|NA M Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility MAG.C3.5_00384 265072.Mfla_2463 7.8e-58 230.3 Nitrosomonadales Bacteria 1RFTH@1224,2KMNQ@206350,2VJC9@28216,COG2413@1,COG2413@2 NA|NA|NA MAG.C3.5_00385 582744.Msip34_2507 0.0 1185.2 Nitrosomonadales mrcA GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0008955,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042546,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 2.4.1.129,3.4.16.4 ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01003,ko01011 GT51 Bacteria 1MU5A@1224,2KKG3@206350,2VHXF@28216,COG5009@1,COG5009@2 NA|NA|NA M TIGRFAM penicillin-binding protein, 1A family MAG.C3.5_00386 582744.Msip34_2506 1.3e-151 542.7 Nitrosomonadales pilM ko:K02662 ko00000,ko02035,ko02044 Bacteria 1MX8P@1224,2KKWF@206350,2VH6W@28216,COG4972@1,COG4972@2 NA|NA|NA NU TIGRFAM type IV pilus assembly protein PilM MAG.C3.5_00387 1236959.BAMT01000002_gene1920 6.2e-57 227.3 Nitrosomonadales pilN ko:K02663 ko00000,ko02035,ko02044 Bacteria 1RF1S@1224,2KMWG@206350,2VN9T@28216,COG3166@1,COG3166@2 NA|NA|NA NU Fimbrial assembly protein (PilN) MAG.C3.5_00388 1236959.BAMT01000002_gene1921 3e-73 281.6 Nitrosomonadales pilO ko:K02664 ko00000,ko02035,ko02044 Bacteria 1RBGW@1224,2KKDE@206350,2VH68@28216,COG3167@1,COG3167@2 NA|NA|NA NU PFAM Pilus assembly protein PilO MAG.C3.5_00389 582744.Msip34_2503 3.3e-54 218.0 Nitrosomonadales pilP ko:K02664,ko:K02665 ko00000,ko02035,ko02044 Bacteria 1RI6V@1224,2KMV4@206350,2VSVR@28216,COG3168@1,COG3168@2 NA|NA|NA NU PFAM Pilus assembly protein PilP MAG.C3.5_00390 265072.Mfla_2457 2.4e-279 968.0 Nitrosomonadales pilQ GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0015976,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 ko:K02507,ko:K02666 ko00000,ko02035,ko02044 3.A.15.2 Bacteria 1QTT6@1224,2KKNT@206350,2VHY4@28216,COG4796@1,COG4796@2 NA|NA|NA U type II and III secretion system protein MAG.C3.5_00391 582744.Msip34_2501 3.3e-65 254.6 Nitrosomonadales aroK 2.7.1.71,4.2.3.4 ko:K00891,ko:K13829 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02412,R03083 RC00002,RC00078,RC00847 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUFJ@1224,2KMSN@206350,2VRDN@28216,COG0703@1,COG0703@2 NA|NA|NA E Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate MAG.C3.5_00392 582744.Msip34_2500 2.5e-160 571.6 Nitrosomonadales aroB GO:0000166,GO:0003674,GO:0003824,GO:0003856,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046417,GO:0046872,GO:0046914,GO:0048037,GO:0050662,GO:0051287,GO:0070403,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.71,4.2.3.4 ko:K01735,ko:K13829 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02412,R03083 RC00002,RC00078,RC00847 ko00000,ko00001,ko00002,ko01000 iAF1260.b3389,iBWG_1329.BWG_3080,iECDH10B_1368.ECDH10B_3564,iECDH1ME8569_1439.ECDH1ME8569_3268,iECNA114_1301.ECNA114_3486,iEcDH1_1363.EcDH1_0324,iIT341.HP0283,iJO1366.b3389,iJR904.b3389,iY75_1357.Y75_RS20275 Bacteria 1MUBK@1224,2KMCZ@206350,2VHXR@28216,COG0337@1,COG0337@2 NA|NA|NA E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) MAG.C3.5_00393 582744.Msip34_2499 9.5e-158 563.1 Nitrosomonadales dgt GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 ko:K01129 ko00230,map00230 R01856 RC00017 ko00000,ko00001,ko01000 Bacteria 1MVQ2@1224,2KKU8@206350,2VI7B@28216,COG0232@1,COG0232@2 NA|NA|NA F Belongs to the dGTPase family. Type 2 subfamily MAG.C3.5_00394 582744.Msip34_2498 6.3e-133 480.7 Nitrosomonadales Bacteria 1P7S0@1224,2KM1P@206350,2VNY2@28216,COG3203@1,COG3203@2 NA|NA|NA M Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane MAG.C3.5_00395 582744.Msip34_2496 8e-86 324.3 Proteobacteria Bacteria 1R12Q@1224,COG0457@1,COG0457@2 NA|NA|NA S Macrocin-O-methyltransferase (TylF) MAG.C3.5_00396 582744.Msip34_2495 3.4e-242 844.0 Nitrosomonadales glnG GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0043565,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 ko:K07712 ko02020,map02020 M00497 ko00000,ko00001,ko00002,ko02022 Bacteria 1MU0N@1224,2KM9J@206350,2VHSB@28216,COG2204@1,COG2204@2 NA|NA|NA T TIGRFAM nitrogen regulation protein NR(I) MAG.C3.5_00397 582744.Msip34_2494 4.7e-170 604.0 Nitrosomonadales glnL GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0004721,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0016787,GO:0016788,GO:0016791,GO:0018106,GO:0018193,GO:0018202,GO:0019222,GO:0019538,GO:0023014,GO:0023052,GO:0035556,GO:0036211,GO:0042578,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051716,GO:0065007,GO:0071704,GO:0140096,GO:1901564 2.7.13.3 ko:K07708,ko:K07710 ko02020,map02020 M00497,M00500 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1MVN6@1224,2KKW6@206350,2VJN7@28216,COG3852@1,COG3852@2 NA|NA|NA T PFAM ATP-binding region ATPase domain protein MAG.C3.5_00398 1236959.BAMT01000002_gene1933 1.3e-26 126.3 Nitrosomonadales Bacteria 1PSUJ@1224,2EBVX@1,2KN2R@206350,2VXJY@28216,335VA@2 NA|NA|NA S Domain of unknown function (DUF4124) MAG.C3.5_00399 1122236.KB905145_gene2554 9.1e-259 899.0 Nitrosomonadales glnA GO:0003674,GO:0003824,GO:0004356,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006541,GO:0006542,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009314,GO:0009628,GO:0009987,GO:0016053,GO:0016211,GO:0016853,GO:0016866,GO:0016874,GO:0016879,GO:0016880,GO:0019676,GO:0019740,GO:0019752,GO:0034022,GO:0042537,GO:0042802,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050486,GO:0050896,GO:0071704,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.4.4.3,6.3.1.2 ko:K01915,ko:K20712 ko00220,ko00250,ko00627,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00627,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 R00253,R06988,R09284 RC00010,RC01754,RC02798 ko00000,ko00001,ko01000,ko04147 iJN746.PP_5046 Bacteria 1MUGQ@1224,2KKT7@206350,2VHYE@28216,COG0174@1,COG0174@2 NA|NA|NA E TIGRFAM glutamine synthetase, type I MAG.C3.5_00400 582744.Msip34_2491 5.6e-61 240.4 Nitrosomonadales Bacteria 1REHH@1224,2KMSD@206350,2VR3P@28216,COG0607@1,COG0607@2 NA|NA|NA P Rhodanese Homology Domain MAG.C3.5_00401 582744.Msip34_2490 2.3e-100 372.1 Nitrosomonadales aroE GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02413 RC00206 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVH4@1224,2KKRT@206350,2VHHC@28216,COG0169@1,COG0169@2 NA|NA|NA E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) MAG.C3.5_00402 582744.Msip34_2489 3.3e-97 361.3 Nitrosomonadales mtgA 2.4.1.129,3.4.16.4 ko:K03814,ko:K05365,ko:K05366,ko:K21464 ko00550,ko01100,ko01501,map00550,map01100,map01501 R04519 RC00005,RC00049 ko00000,ko00001,ko01000,ko01003,ko01011 GT51 Bacteria 1RDAQ@1224,2KMBM@206350,2VHW8@28216,COG0744@1,COG0744@2 NA|NA|NA M Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors MAG.C3.5_00403 582744.Msip34_2488 2.4e-102 378.6 Nitrosomonadales Bacteria 1RCW6@1224,2KMPB@206350,2VMUW@28216,COG1639@1,COG1639@2 NA|NA|NA T signal transduction protein MAG.C3.5_00404 1236959.BAMT01000002_gene1938 0.0 1695.6 Nitrosomonadales uvrA ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 Bacteria 1MW0W@1224,2KKD7@206350,2VIJE@28216,COG0178@1,COG0178@2 NA|NA|NA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate MAG.C3.5_00405 1163617.SCD_n00653 1e-129 470.3 Betaproteobacteria yajR Bacteria 1MVSH@1224,2VITN@28216,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily MAG.C3.5_00406 583345.Mmol_2131 1.1e-65 256.1 Nitrosomonadales ssb ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Bacteria 1RCWT@1224,2KMPH@206350,2VR2Z@28216,COG0629@1,COG0629@2 NA|NA|NA L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism MAG.C3.5_00407 582744.Msip34_2454 2.1e-33 147.9 Nitrosomonadales Bacteria 1N6Q9@1224,2KN44@206350,2VTX5@28216,COG2331@1,COG2331@2 NA|NA|NA S regulatory protein, FmdB family MAG.C3.5_00408 582744.Msip34_2453 9.8e-96 356.3 Nitrosomonadales Bacteria 1MWT5@1224,2KKZ9@206350,2VH65@28216,COG2928@1,COG2928@2 NA|NA|NA S Protein of unknown function (DUF502) MAG.C3.5_00409 358220.C380_05155 2.1e-42 179.1 Comamonadaceae 4.6.1.1 ko:K01768 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV1V@1224,2VJ72@28216,4ABWU@80864,COG2114@1,COG2114@2 NA|NA|NA T Adenylate cyclase MAG.C3.5_00410 265072.Mfla_2254 1.5e-244 852.0 Nitrosomonadales fhs GO:0000096,GO:0000097,GO:0000105,GO:0003674,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006144,GO:0006520,GO:0006547,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006766,GO:0006767,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009108,GO:0009110,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0052803,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.5.1.5,3.5.4.9,6.3.4.3 ko:K00288,ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00141,M00377 R00943,R01220,R01655 RC00026,RC00111,RC00202,RC00578 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1MUR8@1224,2KKID@206350,2VKR6@28216,COG2759@1,COG2759@2 NA|NA|NA F Belongs to the formate--tetrahydrofolate ligase family MAG.C3.5_00411 666681.M301_2408 1.4e-153 548.9 Nitrosomonadales argB GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016020,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0030312,GO:0031406,GO:0034618,GO:0036094,GO:0040007,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.7.2.8 ko:K00930,ko:K14682 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028 R00259,R02649 RC00002,RC00004,RC00043,RC00064 ko00000,ko00001,ko00002,ko01000 iHN637.CLJU_RS10565,iJN678.argB,iLJ478.TM1784 Bacteria 1MU17@1224,2KKS4@206350,2VIIY@28216,COG0548@1,COG0548@2 NA|NA|NA E Belongs to the acetylglutamate kinase family. ArgB subfamily MAG.C3.5_00412 666681.M301_2409 9.9e-80 303.1 Nitrosomonadales phnX 3.1.3.23,3.11.1.1 ko:K05306,ko:K07025,ko:K19270 ko00440,ko01100,ko01120,map00440,map01100,map01120 R00747 RC00368 ko00000,ko00001,ko01000 Bacteria 1QTWD@1224,2KM8Z@206350,2VNTW@28216,COG0637@1,COG0637@2 NA|NA|NA S subfamily IA, variant 3 MAG.C3.5_00413 265072.Mfla_2257 8.3e-78 296.6 Nitrosomonadales slmA GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0000918,GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0007049,GO:0007346,GO:0008150,GO:0009295,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0010564,GO:0010948,GO:0010974,GO:0016043,GO:0019219,GO:0019222,GO:0022402,GO:0022607,GO:0031323,GO:0031326,GO:0031333,GO:0032271,GO:0032272,GO:0032465,GO:0032466,GO:0032506,GO:0032954,GO:0032955,GO:0042802,GO:0043085,GO:0043087,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0043547,GO:0043565,GO:0043590,GO:0044085,GO:0044087,GO:0044093,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0045786,GO:0045930,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051252,GO:0051301,GO:0051302,GO:0051336,GO:0051345,GO:0051726,GO:0051782,GO:0060255,GO:0061640,GO:0065007,GO:0065009,GO:0071840,GO:0080090,GO:0090529,GO:0097159,GO:0140110,GO:1901363,GO:1901891,GO:1901892,GO:1902410,GO:1902412,GO:1902413,GO:1903047,GO:1903436,GO:1903437,GO:1903506,GO:1990837,GO:2000112,GO:2001141 ko:K05501 ko00000,ko03000,ko03036 Bacteria 1MWF7@1224,2KKDC@206350,2VQ4C@28216,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family MAG.C3.5_00414 1158294.JOMI01000003_gene2776 6.6e-79 301.2 Bacteroidia Bacteria 2AC3P@1,2FXDA@200643,311MX@2,4PGG7@976 NA|NA|NA S FRG domain MAG.C3.5_00415 758.BBIX01000005_gene80 3.4e-15 89.7 Pasteurellales 2.7.7.7 ko:K02343,ko:K03642,ko:K13733,ko:K14195 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,ko05100,ko05150,map00230,map00240,map01100,map03030,map03430,map03440,map05100,map05150 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1MU7T@1224,1RNK8@1236,1Y7E1@135625,COG2931@1,COG2931@2,COG3087@1,COG3087@2 NA|NA|NA Q COG2931 RTX toxins and related Ca2 -binding proteins MAG.C3.5_00416 582744.Msip34_2303 2.3e-109 401.7 Nitrosomonadales MA20_32445 ko:K07395 ko00000 Bacteria 1N057@1224,2KKK7@206350,2VHD7@28216,COG3484@1,COG3484@2 NA|NA|NA O PFAM 20S proteasome A and B subunits MAG.C3.5_00417 1101195.Meth11DRAFT_1164 0.0 1907.5 Nitrosomonadales MA20_16195 GO:0003674,GO:0005198,GO:0005575,GO:0005623,GO:0008150,GO:0009987,GO:0016043,GO:0030115,GO:0030312,GO:0044464,GO:0045229,GO:0071840,GO:0071944 Bacteria 1MVAG@1224,2KKJ6@206350,2VKKZ@28216,COG1305@1,COG1305@2,COG4196@1,COG4196@2 NA|NA|NA E Putative amidoligase enzyme (DUF2126) MAG.C3.5_00418 582744.Msip34_0328 1.1e-136 492.7 Nitrosomonadales rpoA GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Bacteria 1MU75@1224,2KKPA@206350,2VHG6@28216,COG0202@1,COG0202@2 NA|NA|NA K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates MAG.C3.5_00419 582744.Msip34_0329 9.4e-57 226.1 Nitrosomonadales rplQ GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02879,ko:K16193 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1RCWN@1224,2KMTV@206350,2VR6I@28216,COG0203@1,COG0203@2 NA|NA|NA J PFAM ribosomal protein L17 MAG.C3.5_00420 1265490.JHVY01000001_gene3479 8e-14 82.8 Gammaproteobacteria XAC3035 ko:K06191 ko00000 Bacteria 1NH8Z@1224,1SGAT@1236,COG0695@1,COG0695@2 NA|NA|NA O COG0526 Thiol-disulfide isomerase and thioredoxins MAG.C3.5_00421 582744.Msip34_0331 1.5e-200 705.7 Nitrosomonadales mgtE ko:K06213 ko00000,ko02000 1.A.26.1 Bacteria 1MW24@1224,2KKRD@206350,2VI29@28216,COG2239@1,COG2239@2 NA|NA|NA P Acts as a magnesium transporter MAG.C3.5_00422 582744.Msip34_0332 7.7e-148 530.4 Nitrosomonadales aefA ko:K05802 ko00000,ko02000 1.A.23.1.1 Bacteria 1MWSA@1224,2KKZX@206350,2VJTH@28216,COG3264@1,COG3264@2 NA|NA|NA M PFAM MscS Mechanosensitive ion channel MAG.C3.5_00423 582744.Msip34_0333 7.5e-182 643.3 Betaproteobacteria desA 1.14.19.1 ko:K00507 ko01040,ko01212,ko03320,ko04152,ko04212,map01040,map01212,map03320,map04152,map04212 R02222 RC00917 ko00000,ko00001,ko01000,ko01004 Bacteria 1N2MA@1224,2VHRS@28216,COG1398@1,COG1398@2 NA|NA|NA I fatty acid desaturase MAG.C3.5_00424 1101195.Meth11DRAFT_0403 3.6e-20 103.2 Nitrosomonadales rpmG GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046677,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02913 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1N6QV@1224,2KNAB@206350,2VVW8@28216,COG0267@1,COG0267@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL33 family MAG.C3.5_00425 265072.Mfla_0312 1e-34 152.1 Nitrosomonadales rpmB GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02902 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1MZ57@1224,2KN2K@206350,2VU1B@28216,COG0227@1,COG0227@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL28 family MAG.C3.5_00426 582744.Msip34_0336 2.2e-73 281.6 Nitrosomonadales dut GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23,4.1.1.36,6.3.2.5 ko:K01520,ko:K13038 ko00240,ko00770,ko00983,ko01100,map00240,map00770,map00983,map01100 M00053,M00120 R02100,R03269,R04231,R11896 RC00002,RC00064,RC00090,RC00822 ko00000,ko00001,ko00002,ko01000,ko03400 Bacteria 1RA7P@1224,2KMEE@206350,2VQ5I@28216,COG0756@1,COG0756@2 NA|NA|NA F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA MAG.C3.5_00427 1502770.JQMG01000001_gene1190 1.8e-146 525.8 Nitrosomonadales coaBC 4.1.1.36,6.3.2.5 ko:K01598,ko:K13038 ko00770,ko01100,map00770,map01100 M00120 R03269,R04231 RC00064,RC00090,RC00822 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVQP@1224,2KM8M@206350,2VI4X@28216,COG0452@1,COG0452@2 NA|NA|NA H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine MAG.C3.5_00428 1101195.Meth11DRAFT_0409 4.5e-99 367.5 Nitrosomonadales radC ko:K03630 ko00000 Bacteria 1MXZ5@1224,2KKTE@206350,2VKTW@28216,COG2003@1,COG2003@2 NA|NA|NA L TIGRFAM DNA repair protein RadC MAG.C3.5_00429 666681.M301_2799 1.7e-25 121.3 Nitrosomonadales yidD ko:K08998 ko00000 Bacteria 1N6U4@1224,2KNAE@206350,2VVTR@28216,COG0759@1,COG0759@2 NA|NA|NA S Could be involved in insertion of integral membrane proteins into the membrane MAG.C3.5_00430 582744.Msip34_2830 4.2e-35 154.1 Nitrosomonadales rnpA GO:0000966,GO:0001682,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031123,GO:0031404,GO:0031974,GO:0031981,GO:0032991,GO:0033204,GO:0034414,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042301,GO:0042779,GO:0042780,GO:0042781,GO:0043167,GO:0043168,GO:0043170,GO:0043199,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043628,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901681,GO:1902494,GO:1902555,GO:1905267,GO:1905348,GO:1990904 3.1.26.5 ko:K03536,ko:K08998 ko00000,ko01000,ko03016 Bacteria 1PVTI@1224,2KP7Y@206350,2VW57@28216,COG0594@1,COG0594@2 NA|NA|NA J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme MAG.C3.5_00431 1236959.BAMT01000007_gene2600 1.3e-13 81.3 Nitrosomonadales rpmH GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02914 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1NGGS@1224,2KNCD@206350,2VXTS@28216,COG0230@1,COG0230@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL34 family MAG.C3.5_00432 582744.Msip34_0001 1.5e-213 748.8 Nitrosomonadales dnaA GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006275,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010556,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:1990837,GO:2000112 ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 Bacteria 1MU5H@1224,2KKJ9@206350,2VHH0@28216,COG0593@1,COG0593@2 NA|NA|NA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids MAG.C3.5_00433 582744.Msip34_0857 5.8e-218 763.5 Nitrosomonadales pyrG GO:0001775,GO:0002376,GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016020,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032943,GO:0034404,GO:0034641,GO:0034654,GO:0040007,GO:0042098,GO:0042100,GO:0042110,GO:0042113,GO:0042221,GO:0042455,GO:0042493,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0050896,GO:0055086,GO:0070661,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 ko:K01937 ko00240,ko01100,map00240,map01100 M00052 R00571,R00573 RC00010,RC00074 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_1276,iECO103_1326.ECO103_3323,iNJ661.Rv1699,iPC815.YPO3377 Bacteria 1MUIT@1224,2KMB4@206350,2VHVA@28216,COG0504@1,COG0504@2 NA|NA|NA F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates MAG.C3.5_00434 1122236.KB905141_gene1109 3e-148 531.2 Nitrosomonadales kdsA 2.5.1.55 ko:K01627 ko00540,ko01100,map00540,map01100 M00063 R03254 RC00435 ko00000,ko00001,ko00002,ko01000,ko01005 Bacteria 1MV91@1224,2KM8V@206350,2VIQF@28216,COG2877@1,COG2877@2 NA|NA|NA M 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase MAG.C3.5_00435 582744.Msip34_0859 1.3e-224 785.4 Nitrosomonadales eno GO:0000015,GO:0000287,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902494 4.2.1.11 ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 M00001,M00002,M00003,M00346,M00394 R00658 RC00349 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Bacteria 1MU1N@1224,2KM0W@206350,2VH7Y@28216,COG0148@1,COG0148@2 NA|NA|NA G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis MAG.C3.5_00436 582744.Msip34_0860 4.9e-37 160.6 Nitrosomonadales ftsB GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0019954,GO:0022402,GO:0022414,GO:0030428,GO:0032153,GO:0032505,GO:0042802,GO:0043093,GO:0044464,GO:0051301,GO:0071944 ko:K05589 ko00000,ko03036 Bacteria 1N7AA@1224,2KN3C@206350,2VVQJ@28216,COG2919@1,COG2919@2 NA|NA|NA D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic MAG.C3.5_00437 1112274.KI911560_gene2518 2e-214 751.9 Betaproteobacteria Bacteria 1R6K6@1224,2DB9H@1,2W0C2@28216,2Z7WW@2 NA|NA|NA MAG.C3.5_00438 640081.Dsui_1207 1.2e-41 179.9 Rhodocyclales avxIA Bacteria 1MU7T@1224,2KW9H@206389,2VHFJ@28216,COG2931@1,COG2931@2 NA|NA|NA Q Haemolysin-type calcium-binding repeat (2 copies) MAG.C3.5_00439 582744.Msip34_0717 0.0 1147.9 Nitrosomonadales thrS GO:0000166,GO:0000900,GO:0002161,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004812,GO:0004829,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006417,GO:0006418,GO:0006435,GO:0006446,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016070,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0017076,GO:0017148,GO:0019222,GO:0019538,GO:0019752,GO:0030371,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032553,GO:0032555,GO:0032559,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045182,GO:0045947,GO:0046483,GO:0046872,GO:0046914,GO:0048027,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0052689,GO:0060255,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090079,GO:0090304,GO:0097159,GO:0097367,GO:0106074,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112,GO:2000113 6.1.1.3 ko:K01868 ko00970,map00970 M00359,M00360 R03663 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iPC815.YPO2433,iSDY_1059.SDY_1814 Bacteria 1MUP2@1224,2KM0I@206350,2VHFD@28216,COG0441@1,COG0441@2 NA|NA|NA J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) MAG.C3.5_00440 582744.Msip34_0718 8.6e-67 259.6 Nitrosomonadales infC GO:0000049,GO:0001731,GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006807,GO:0006950,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009409,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016020,GO:0016043,GO:0019222,GO:0019538,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032268,GO:0032270,GO:0032790,GO:0032984,GO:0032988,GO:0032991,GO:0034248,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043022,GO:0043024,GO:0043043,GO:0043170,GO:0043254,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045727,GO:0045948,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065003,GO:0065007,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:1901193,GO:1901195,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008,GO:1904688,GO:1904690,GO:1990856,GO:1990904,GO:2000112,GO:2000765,GO:2000767 ko:K02520 ko00000,ko03012,ko03029 Bacteria 1RDD2@1224,2KMKP@206350,2VQ19@28216,COG0290@1,COG0290@2 NA|NA|NA J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins MAG.C3.5_00441 583345.Mmol_1586 2.1e-25 120.9 Nitrosomonadales rpmI GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 ko:K02916 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1N6V4@1224,2KN5H@206350,2VVS9@28216,COG0291@1,COG0291@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL35 family MAG.C3.5_00442 1236959.BAMT01000016_gene2805 2e-53 214.9 Nitrosomonadales rplT GO:0000027,GO:0000900,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006355,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030371,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0060255,GO:0065003,GO:0065007,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090079,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2000113,GO:2001141 ko:K02887 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1RGU2@1224,2KMT0@206350,2VRWF@28216,COG0292@1,COG0292@2 NA|NA|NA J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit MAG.C3.5_00443 697282.Mettu_3502 2e-64 253.1 Methylococcales 2.1.1.80,3.1.1.61 ko:K13924 ko02020,ko02030,map02020,map02030 M00506 ko00000,ko00001,ko00002,ko01000,ko02022,ko02035 Bacteria 1PGPR@1224,1RX1U@1236,1XGJY@135618,COG3290@1,COG3290@2,COG3447@1,COG3447@2,COG3614@1,COG3614@2,COG3920@1,COG3920@2 NA|NA|NA T Histidine kinase MAG.C3.5_00444 1122236.KB905143_gene72 4.7e-58 231.1 Betaproteobacteria ko:K22010 M00839 ko00000,ko00002,ko02022 Bacteria 1QZ0F@1224,2WHZP@28216,COG3707@1,COG3707@2 NA|NA|NA T ANTAR MAG.C3.5_00445 62928.azo1544 4.4e-68 265.4 Rhodocyclales Bacteria 1MU2C@1224,2KV9J@206389,2VH3V@28216,COG5001@1,COG5001@2 NA|NA|NA T Diguanylate cyclase MAG.C3.5_00447 666681.M301_0173 3.6e-79 301.2 Nitrosomonadales cobO GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008817,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019250,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.17 ko:K16092,ko:K19221 ko00860,ko01100,map00860,map01100 M00122 R01492,R05220,R07268 RC00533 ko00000,ko00001,ko00002,ko01000,ko02000 1.B.14.3 iAF1260.b1270,iB21_1397.B21_01256,iBWG_1329.BWG_1099,iECABU_c1320.ECABU_c15500,iECBD_1354.ECBD_2352,iECB_1328.ECB_01246,iECDH10B_1368.ECDH10B_1385,iECDH1ME8569_1439.ECDH1ME8569_1209,iECD_1391.ECD_01246,iECIAI1_1343.ECIAI1_1288,iECO111_1330.ECO111_1649,iECO26_1355.ECO26_1834,iETEC_1333.ETEC_1372,iEcDH1_1363.EcDH1_2379,iEcHS_1320.EcHS_A1379,iJO1366.b1270,iJR904.b1270,iLF82_1304.LF82_0253,iNRG857_1313.NRG857_06515,iUMNK88_1353.UMNK88_1599,iY75_1357.Y75_RS06640,iYL1228.KPN_01266,ic_1306.c1735 Bacteria 1MUN6@1224,2KMMV@206350,2VM7I@28216,COG2109@1,COG2109@2 NA|NA|NA H Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids MAG.C3.5_00448 666681.M301_0174 7.7e-60 236.9 Nitrosomonadales Bacteria 1RM6G@1224,2ARZT@1,2KNS2@206350,2VT5G@28216,31HBY@2 NA|NA|NA MAG.C3.5_00449 666681.M301_0175 7.7e-165 587.4 Nitrosomonadales btuB GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0006810,GO:0006811,GO:0008150,GO:0015075,GO:0015267,GO:0015318,GO:0015889,GO:0015893,GO:0016020,GO:0016021,GO:0019904,GO:0022803,GO:0022838,GO:0022857,GO:0031224,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0050896,GO:0051179,GO:0051180,GO:0051181,GO:0051234,GO:0055085,GO:0071702,GO:0071705 ko:K16092 ko00000,ko02000 1.B.14.3 iECB_1328.ECB_03851,iECP_1309.ECP_4183,iSF_1195.SF4048,iS_1188.S3696 Bacteria 1MW63@1224,2KKSU@206350,2VH64@28216,COG4206@1,COG4206@2 NA|NA|NA H TonB dependent receptor MAG.C3.5_00450 265072.Mfla_0123 1.6e-14 85.1 Nitrosomonadales Bacteria 1QA1T@1224,2APM6@1,2KNCI@206350,2VYY3@28216,31EQI@2 NA|NA|NA MAG.C3.5_00451 582744.Msip34_0158 1.3e-40 172.2 Nitrosomonadales zapA GO:0000003,GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0000921,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0007010,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0019954,GO:0022402,GO:0022414,GO:0022607,GO:0030428,GO:0031106,GO:0032153,GO:0032185,GO:0032505,GO:0032506,GO:0034622,GO:0042802,GO:0043093,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0051301,GO:0061640,GO:0065003,GO:0070925,GO:0071840,GO:0090529,GO:1902410,GO:1903047 ko:K09888 ko00000,ko03036 Bacteria 1N6YN@1224,2KP3R@206350,2VUY2@28216,COG3027@1,COG3027@2 NA|NA|NA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division MAG.C3.5_00452 582744.Msip34_0159 4.6e-58 230.3 Nitrosomonadales ko:K09966 ko00000 Bacteria 1RH68@1224,2KMS3@206350,2VSN3@28216,COG3651@1,COG3651@2 NA|NA|NA S Uncharacterized protein conserved in bacteria (DUF2237) MAG.C3.5_00453 582744.Msip34_0160 2.6e-74 284.6 Nitrosomonadales Bacteria 1RHRU@1224,2KKTX@206350,2VRIB@28216,COG2947@1,COG2947@2 NA|NA|NA S EVE domain MAG.C3.5_00454 582744.Msip34_0162 1.6e-74 286.6 Nitrosomonadales Bacteria 1P862@1224,2KMGK@206350,2VJRK@28216,COG3391@1,COG3391@2 NA|NA|NA S TIGRFAM 40-residue YVTN family beta-propeller repeat MAG.C3.5_00455 582744.Msip34_0163 7.7e-248 862.8 Nitrosomonadales ilvA GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 ko:K01754 ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230 M00570 R00220,R00996 RC00418,RC02600 ko00000,ko00001,ko00002,ko01000 iJN678.ilvA Bacteria 1MVWJ@1224,2KKTG@206350,2VI5U@28216,COG1171@1,COG1171@2 NA|NA|NA E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA MAG.C3.5_00456 582744.Msip34_0164 3.3e-110 404.4 Nitrosomonadales rpiA GO:0003674,GO:0003824,GO:0004751,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006014,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009117,GO:0009987,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0042802,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564 5.3.1.6 ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167,M00580 R01056 RC00434 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVGR@1224,2KKDZ@206350,2VH27@28216,COG0120@1,COG0120@2 NA|NA|NA G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate MAG.C3.5_00457 582744.Msip34_0165 1e-117 429.5 Nitrosomonadales phoU GO:0000287,GO:0001558,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006873,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009268,GO:0009405,GO:0009408,GO:0009605,GO:0009628,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010563,GO:0010605,GO:0010629,GO:0010966,GO:0016020,GO:0016036,GO:0019220,GO:0019222,GO:0019725,GO:0019897,GO:0019898,GO:0022898,GO:0030002,GO:0030145,GO:0030320,GO:0030643,GO:0031323,GO:0031324,GO:0031667,GO:0031668,GO:0031669,GO:0032409,GO:0032410,GO:0032412,GO:0032413,GO:0032879,GO:0033554,GO:0034605,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0040008,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043269,GO:0043271,GO:0044070,GO:0044092,GO:0044419,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045936,GO:0046677,GO:0046872,GO:0046914,GO:0046983,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051174,GO:0051704,GO:0051716,GO:0055062,GO:0055081,GO:0055082,GO:0055083,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071496,GO:0071944,GO:0072501,GO:0072502,GO:0072505,GO:0072506,GO:0098771,GO:0104004,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 ko:K02039 ko00000 Bacteria 1MUMI@1224,2KM7N@206350,2VI2C@28216,COG0704@1,COG0704@2 NA|NA|NA P Plays a role in the regulation of phosphate uptake MAG.C3.5_00458 582744.Msip34_0166 5.4e-209 733.8 Nitrosomonadales ppx 3.6.1.11,3.6.1.40 ko:K01524 ko00230,map00230 R03409 RC00002 ko00000,ko00001,ko01000 Bacteria 1MV35@1224,2KMEZ@206350,2VI1K@28216,COG0248@1,COG0248@2 NA|NA|NA FP PFAM Ppx GppA phosphatase MAG.C3.5_00459 582744.Msip34_0167 0.0 1130.9 Nitrosomonadales ppk 2.7.4.1 ko:K00937 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 iJN746.PP_5217 Bacteria 1MUM3@1224,2KKXK@206350,2VHH8@28216,COG0855@1,COG0855@2 NA|NA|NA P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) MAG.C3.5_00460 265072.Mfla_1529 3.7e-59 234.2 Nitrosomonadales tsf GO:0001871,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005085,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010467,GO:0019538,GO:0019899,GO:0030246,GO:0030247,GO:0034641,GO:0034645,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051020,GO:0065007,GO:0065009,GO:0071704,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2001065 ko:K02357 ko00000,ko03012,ko03029 Bacteria 1MUS2@1224,2KM9T@206350,2VHSG@28216,COG0264@1,COG0264@2 NA|NA|NA J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome MAG.C3.5_00461 582744.Msip34_1409 2.2e-121 441.8 Nitrosomonadales pyrH GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0033862,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.22 ko:K09903 ko00240,ko01100,map00240,map01100 R00158 RC00002 ko00000,ko00001,ko01000 Bacteria 1MV3N@1224,2KKZ6@206350,2VH8A@28216,COG0528@1,COG0528@2 NA|NA|NA F Catalyzes the reversible phosphorylation of UMP to UDP MAG.C3.5_00462 582744.Msip34_1408 1.2e-81 309.3 Nitrosomonadales frr GO:0002181,GO:0002184,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0030312,GO:0032984,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02838 ko00000,ko03012 Bacteria 1N66T@1224,2KM1Y@206350,2VIUA@28216,COG0233@1,COG0233@2 NA|NA|NA J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another MAG.C3.5_00463 582744.Msip34_1407 9.2e-109 399.8 Nitrosomonadales uppS GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 ko:K00806 ko00900,ko01110,map00900,map01110 R06447 RC00279,RC02839 ko00000,ko00001,ko01000,ko01006 Bacteria 1MVP1@1224,2KKTC@206350,2VH2E@28216,COG0020@1,COG0020@2 NA|NA|NA I Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids MAG.C3.5_00464 265072.Mfla_1525 3.1e-61 241.9 Nitrosomonadales cdsA GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044464,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 M00093 R01799 RC00002 ko00000,ko00001,ko00002,ko01000 iJN746.PP_1596,iSDY_1059.SDY_0191 Bacteria 1MWSV@1224,2KMNS@206350,2VMM0@28216,COG0575@1,COG0575@2 NA|NA|NA I Belongs to the CDS family MAG.C3.5_00465 582744.Msip34_1405 4.8e-152 544.3 Nitrosomonadales dxr GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0050897,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 ko:K00099 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05688 RC01452 ko00000,ko00001,ko00002,ko01000 iAPECO1_1312.APECO1_1814,iECOK1_1307.ECOK1_0174,iECS88_1305.ECS88_0183,iHN637.CLJU_RS06420,iNJ661.Rv2870c,iUMN146_1321.UM146_23670,iUTI89_1310.UTI89_C0188 Bacteria 1MU4G@1224,2KM2I@206350,2VHJY@28216,COG0743@1,COG0743@2 NA|NA|NA I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) MAG.C3.5_00466 1123368.AUIS01000015_gene2615 1.4e-93 350.1 Gammaproteobacteria ko:K12065 ko00000,ko02044 3.A.7.11.1 Bacteria 1QW3W@1224,1T2RV@1236,COG2433@1,COG2433@2 NA|NA|NA S Pfam Transposase IS66 MAG.C3.5_00467 1123368.AUIS01000015_gene2618 1.5e-39 169.5 Gammaproteobacteria rnfG GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03612 ko00000 Bacteria 1MZVX@1224,1S9KJ@1236,COG4659@1,COG4659@2 NA|NA|NA C FMN-binding MAG.C3.5_00468 1123368.AUIS01000015_gene2619 4.3e-42 178.3 Gammaproteobacteria ynaJ Bacteria 1QVX4@1224,1T2MJ@1236,COG3182@1,COG3182@2 NA|NA|NA S PepSY-associated TM region MAG.C3.5_00469 265072.Mfla_1921 1.4e-216 758.8 Nitrosomonadales algC GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005488,GO:0005975,GO:0005976,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009243,GO:0009244,GO:0009311,GO:0009312,GO:0009405,GO:0009987,GO:0016051,GO:0016053,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0042120,GO:0042121,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044419,GO:0046394,GO:0046401,GO:0046402,GO:0046872,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.4.2.2,5.4.2.8 ko:K01835,ko:K01840,ko:K15778 ko00010,ko00030,ko00051,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 M00114,M00549 R00959,R01057,R01818,R08639 RC00408 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUA5@1224,2KKKG@206350,2VJ29@28216,COG1109@1,COG1109@2 NA|NA|NA G phosphoglucomutase phosphomannomutase alpha beta alpha domain I MAG.C3.5_00470 1198452.Jab_2c31010 3.4e-92 345.1 Oxalobacteraceae yheT GO:0003674,GO:0003824,GO:0006629,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0044237,GO:0044238,GO:0044255,GO:0050526,GO:0052689,GO:0071704 ko:K07019 ko00000 Bacteria 1MWV1@1224,2VHZ1@28216,473G7@75682,COG0429@1,COG0429@2 NA|NA|NA S alpha/beta hydrolase fold MAG.C3.5_00471 1165096.ARWF01000001_gene691 2e-23 114.4 Nitrosomonadales iscX GO:0003674,GO:0004857,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0030234,GO:0031163,GO:0043086,GO:0043167,GO:0043169,GO:0044085,GO:0044092,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050790,GO:0051186,GO:0065007,GO:0065009,GO:0071840,GO:0098772 Bacteria 1N7C1@1224,2KN9E@206350,2VVQU@28216,COG2975@1,COG2975@2 NA|NA|NA S Iron-sulphur cluster assembly MAG.C3.5_00472 582744.Msip34_0832 2.1e-227 794.7 Nitrosomonadales glyA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.1.2.1 ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 M00140,M00141,M00346,M00532 R00945,R09099 RC00022,RC00112,RC01583,RC02958 ko00000,ko00001,ko00002,ko01000 iIT341.HP0183 Bacteria 1MUIS@1224,2KKD4@206350,2VJ4F@28216,COG0112@1,COG0112@2 NA|NA|NA E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism MAG.C3.5_00473 1165096.ARWF01000001_gene689 4.4e-74 283.9 Nitrosomonadales nrdR GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008144,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 ko:K07738 ko00000,ko03000 Bacteria 1RE7V@1224,2KMPK@206350,2VR9P@28216,COG1327@1,COG1327@2 NA|NA|NA K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes MAG.C3.5_00474 666681.M301_1078 1.7e-32 145.6 Nitrosomonadales Bacteria 1P4TY@1224,28WCY@1,2KN05@206350,2W7ZQ@28216,2ZID9@2 NA|NA|NA MAG.C3.5_00475 582744.Msip34_0834 5.2e-132 477.6 Nitrosomonadales ribD GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006725,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0008703,GO:0008835,GO:0009058,GO:0009110,GO:0009231,GO:0009451,GO:0009987,GO:0016070,GO:0016491,GO:0016614,GO:0016616,GO:0016787,GO:0016810,GO:0016814,GO:0017144,GO:0018130,GO:0019239,GO:0034641,GO:0036094,GO:0042364,GO:0042726,GO:0042727,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.1.1.193,3.5.4.26 ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 M00125 R03458,R03459 RC00204,RC00933 ko00000,ko00001,ko00002,ko01000 iB21_1397.B21_00366,iECBD_1354.ECBD_3247,iECB_1328.ECB_00362,iECD_1391.ECD_00362,iECED1_1282.ECED1_0437,iECNA114_1301.ECNA114_0391,iECSF_1327.ECSF_0374,iEcolC_1368.EcolC_3219,iJN746.PP_0514,iLF82_1304.LF82_1880,iNRG857_1313.NRG857_01945,iYL1228.KPN_00366,ic_1306.c0524 Bacteria 1MUWT@1224,2KM29@206350,2VI9P@28216,COG0117@1,COG0117@2,COG1985@1,COG1985@2 NA|NA|NA H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate MAG.C3.5_00476 1101195.Meth11DRAFT_1667 6.1e-90 337.4 Nitrosomonadales yjjV ko:K03424 ko00000,ko01000 Bacteria 1MW5C@1224,2KKFJ@206350,2VH67@28216,COG0084@1,COG0084@2 NA|NA|NA L TatD related DNase MAG.C3.5_00477 1502770.JQMG01000001_gene1641 2.5e-136 491.9 Nitrosomonadales mtnA GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 ko:K08963 ko00270,ko01100,map00270,map01100 M00034 R04420 RC01151 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUPM@1224,2KKV9@206350,2VI2X@28216,COG0182@1,COG0182@2 NA|NA|NA J Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) MAG.C3.5_00478 582744.Msip34_0855 1.1e-86 326.2 Nitrosomonadales fucA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006004,GO:0008150,GO:0008152,GO:0008270,GO:0008738,GO:0009056,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0019317,GO:0019318,GO:0019320,GO:0019321,GO:0019323,GO:0019566,GO:0019568,GO:0019571,GO:0042354,GO:0042355,GO:0043167,GO:0043169,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046372,GO:0046872,GO:0046914,GO:0071704,GO:1901575 4.1.2.17 ko:K01628 ko00051,ko01120,map00051,map01120 R02262 RC00603,RC00604 ko00000,ko00001,ko01000 Bacteria 1MW7B@1224,2KM3S@206350,2VQBC@28216,COG0235@1,COG0235@2 NA|NA|NA G PFAM class II aldolase adducin family protein MAG.C3.5_00479 582744.Msip34_1758 0.0 1417.5 Nitrosomonadales glgP GO:0000272,GO:0003674,GO:0003824,GO:0004645,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005976,GO:0005977,GO:0005980,GO:0006073,GO:0006091,GO:0006112,GO:0008144,GO:0008150,GO:0008152,GO:0008184,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0015980,GO:0016052,GO:0016740,GO:0016757,GO:0016758,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0055114,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901575 2.4.1.1 ko:K00688 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 R02111 ko00000,ko00001,ko01000 GT35 Bacteria 1MW4J@1224,2KKJ1@206350,2VJIJ@28216,COG0058@1,COG0058@2 NA|NA|NA G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties MAG.C3.5_00480 582744.Msip34_1757 5.3e-95 354.0 Nitrosomonadales Bacteria 1RA5I@1224,2C8XG@1,2KKNU@206350,2VQGY@28216,2Z7PK@2 NA|NA|NA S Protein of unknown function (DUF4197) MAG.C3.5_00481 1150469.RSPPHO_02405 7.7e-169 600.1 Rhodospirillales dctA GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K11103 ko02020,map02020 ko00000,ko00001,ko02000 2.A.23.1.3,2.A.23.1.6,2.A.23.1.7 Bacteria 1MU0Q@1224,2JPKH@204441,2TRET@28211,COG1301@1,COG1301@2 NA|NA|NA U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family MAG.C3.5_00482 582744.Msip34_0897 0.0 2241.8 Nitrosomonadales purL GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006520,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016884,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.5.3 ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04463 RC00010,RC01160 ko00000,ko00001,ko00002,ko01000 iECH74115_1262.ECH74115_3792,iECO111_1330.ECO111_3283,iECSP_1301.ECSP_3501,iECs_1301.ECs3423,iG2583_1286.G2583_3088,iJN746.PP_1037,ic_1306.c3080 Bacteria 1MYN4@1224,2KKQX@206350,2VHTE@28216,COG0046@1,COG0046@2,COG0047@1,COG0047@2 NA|NA|NA F Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate MAG.C3.5_00483 582744.Msip34_0898 8.3e-26 123.6 Nitrosomonadales Bacteria 1N995@1224,2KN00@206350,2VYC2@28216,COG0666@1,COG0666@2 NA|NA|NA S Ankyrin repeats (3 copies) MAG.C3.5_00484 582744.Msip34_0899 5.4e-25 120.6 Nitrosomonadales soxE Bacteria 1NGJ1@1224,2KNB9@206350,2VVR2@28216,COG2863@1,COG2863@2 NA|NA|NA C cytochrome MAG.C3.5_00485 1165096.ARWF01000001_gene2275 2.6e-172 611.7 Nitrosomonadales 1.8.5.4 ko:K17218 ko00920,map00920 R10152 RC03155 ko00000,ko00001,ko01000 Bacteria 1N5MC@1224,2KKP3@206350,2VK35@28216,COG0446@1,COG0446@2 NA|NA|NA S PFAM Flavocytochrome c sulphide dehydrogenase, flavin-binding MAG.C3.5_00486 582744.Msip34_0901 1e-155 556.6 Nitrosomonadales Bacteria 1RC14@1224,2KM5X@206350,2VPAW@28216,COG2133@1,COG2133@2 NA|NA|NA G Glucose / Sorbosone dehydrogenase MAG.C3.5_00487 582744.Msip34_0902 1.7e-41 176.0 Nitrosomonadales Bacteria 1PJIM@1224,2BUKJ@1,2KN6G@206350,2W80F@28216,32PX3@2 NA|NA|NA MAG.C3.5_00488 582744.Msip34_0903 4.9e-98 364.4 Nitrosomonadales Bacteria 1QY38@1224,2KKY0@206350,2W7VM@28216,COG3386@1,COG3386@2 NA|NA|NA G SMP-30/Gluconolaconase/LRE-like region MAG.C3.5_00489 580332.Slit_1246 1.8e-77 295.4 Nitrosomonadales yaeQ Bacteria 1RDR9@1224,2VR81@28216,44VRH@713636,COG4681@1,COG4681@2 NA|NA|NA S YaeQ MAG.C3.5_00490 1236959.BAMT01000001_gene1291 4.8e-37 161.4 Nitrosomonadales Bacteria 1NM2K@1224,2EM7S@1,2KMSQ@206350,2VYUH@28216,33EWW@2 NA|NA|NA MAG.C3.5_00491 265072.Mfla_1891 6.5e-62 243.8 Betaproteobacteria 5.2.1.8 ko:K03767,ko:K03768 ko01503,ko04217,map01503,map04217 ko00000,ko00001,ko01000,ko03110,ko04147 Bacteria 1R9ZQ@1224,2VQ6F@28216,COG0652@1,COG0652@2 NA|NA|NA M PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides MAG.C3.5_00492 582744.Msip34_0904 2.6e-115 421.8 Nitrosomonadales serB GO:0000287,GO:0001505,GO:0003674,GO:0003824,GO:0004647,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006544,GO:0006545,GO:0006563,GO:0006564,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017144,GO:0019752,GO:0042133,GO:0042136,GO:0042578,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046872,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.3 ko:K01079 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R00582 RC00017 ko00000,ko00001,ko00002,ko01000,ko01009 iE2348C_1286.E2348C_4686,iEC042_1314.EC042_4885,iECO26_1355.ECO26_5594,iECSF_1327.ECSF_4321,iECUMN_1333.ECUMN_5012,iETEC_1333.ETEC_4743,iPC815.YPO0442,iUMNK88_1353.UMNK88_5307 Bacteria 1MWA3@1224,2KM78@206350,2VKZJ@28216,COG0560@1,COG0560@2 NA|NA|NA E PFAM Haloacid dehalogenase domain protein hydrolase MAG.C3.5_00493 582744.Msip34_0905 3e-183 647.9 Nitrosomonadales sucC GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009361,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0032991,GO:0042709,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045333,GO:0055114,GO:0071704,GO:0072350,GO:1902494 6.2.1.5 ko:K01903 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00173,M00374,M00620 R00405,R02404 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000 iPC815.YPO1115,iUMNK88_1353.UMNK88_764 Bacteria 1MVCE@1224,2KKYP@206350,2VHBG@28216,COG0045@1,COG0045@2 NA|NA|NA C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit MAG.C3.5_00494 265072.Mfla_1888 5.5e-145 520.4 Nitrosomonadales sucD GO:0001539,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0008150,GO:0008152,GO:0009361,GO:0009987,GO:0016310,GO:0019538,GO:0032991,GO:0036211,GO:0040011,GO:0042709,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0046777,GO:0048870,GO:0051179,GO:0051674,GO:0071704,GO:0071973,GO:0097588,GO:1901564,GO:1902494 6.2.1.5 ko:K01902,ko:K02381 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00173,M00374,M00620 R00405,R02404 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000 iE2348C_1286.E2348C_0608 Bacteria 1MUGA@1224,2KKX8@206350,2VH1U@28216,COG0074@1,COG0074@2 NA|NA|NA C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit MAG.C3.5_00495 1165096.ARWF01000001_gene2264 2.6e-07 63.2 Nitrosomonadales ko:K06867 ko00000 Bacteria 1RBYV@1224,2KKR1@206350,2VVSX@28216,COG0666@1,COG0666@2 NA|NA|NA S Ankyrin repeat MAG.C3.5_00496 582744.Msip34_0908 9.6e-212 743.0 Nitrosomonadales nadE GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.1.5,6.3.5.1 ko:K01916,ko:K01950 ko00760,ko01100,map00760,map01100 M00115 R00189,R00257 RC00010,RC00100 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU9U@1224,2KKUX@206350,2VJ8C@28216,COG0171@1,COG0171@2,COG0388@1,COG0388@2 NA|NA|NA H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source MAG.C3.5_00497 909663.KI867150_gene2172 2.8e-131 475.3 Deltaproteobacteria expC Bacteria 1NJ19@1224,2WJJ7@28221,42NG7@68525,COG0438@1,COG0438@2 NA|NA|NA M glycosyl transferase group 1 MAG.C3.5_00498 582744.Msip34_0823 1e-184 653.3 Nitrosomonadales aprD ko:K06147,ko:K06148,ko:K12536,ko:K16299 ko02010,map02010 M00328,M00571 ko00000,ko00001,ko00002,ko02000,ko02044 3.A.1,3.A.1.106,3.A.1.109,3.A.1.110,3.A.1.110.10,3.A.1.21 Bacteria 1NTI5@1224,2KM4N@206350,2VHSJ@28216,COG4618@1,COG4618@2 NA|NA|NA V ABC transporter MAG.C3.5_00499 1236959.BAMT01000005_gene206 7.2e-91 340.5 Nitrosomonadales ypjD GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 Bacteria 1R3YD@1224,2KKB5@206350,2VK0H@28216,COG4137@1,COG4137@2 NA|NA|NA S PFAM Cytochrome C assembly protein MAG.C3.5_00500 582744.Msip34_2227 7.5e-92 343.6 Nitrosomonadales YPO1315 Bacteria 1RA1A@1224,2KKU6@206350,2VMGV@28216,COG0560@1,COG0560@2 NA|NA|NA E TIGRFAM HAD-superfamily subfamily IB hydrolase, TIGR01490 MAG.C3.5_00501 582744.Msip34_2228 8.2e-64 250.4 Nitrosomonadales Bacteria 1RDHR@1224,2KNEN@206350,2VRKF@28216,COG3235@1,COG3235@2 NA|NA|NA S Cobalt uptake substrate-specific transmembrane region MAG.C3.5_00502 666681.M301_2348 1.6e-83 316.2 Nitrosomonadales yedA GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0016020,GO:0022857,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 Bacteria 1MXX1@1224,2KMIX@206350,2VPGS@28216,COG0697@1,COG0697@2 NA|NA|NA EG EamA-like transporter family MAG.C3.5_00503 179408.Osc7112_4200 3.4e-61 241.9 Oscillatoriales Bacteria 1G4QP@1117,1HB8I@1150,COG0500@1,COG2226@2 NA|NA|NA Q Methyltransferase domain MAG.C3.5_00504 582744.Msip34_2229 1.9e-262 911.4 Nitrosomonadales leuA 2.3.3.13 ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 M00432 R01213 RC00004,RC00470,RC02754 br01601,ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS10690,iYO844.BSU28280 Bacteria 1MUNQ@1224,2KKGK@206350,2VI4G@28216,COG0119@1,COG0119@2 NA|NA|NA E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) MAG.C3.5_00505 582744.Msip34_2230 1.2e-122 446.0 Nitrosomonadales pssA GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.8.8 ko:K17103 ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110 M00093 R01800 RC00002,RC00017,RC02795 ko00000,ko00001,ko00002,ko01000 Bacteria 1MWD9@1224,2KKHZ@206350,2VIME@28216,COG1183@1,COG1183@2 NA|NA|NA I Belongs to the CDP-alcohol phosphatidyltransferase class-I family MAG.C3.5_00506 582744.Msip34_1233 0.0 1142.1 Nitrosomonadales ko:K02659,ko:K03408 ko02020,ko02025,ko02030,map02020,map02025,map02030 ko00000,ko00001,ko02035,ko02044 Bacteria 1QVCF@1224,2KKVY@206350,2VK5W@28216,COG0835@1,COG0835@2 NA|NA|NA NT Two component signalling adaptor domain MAG.C3.5_00507 582744.Msip34_2231 2.9e-188 664.5 Nitrosomonadales tgt GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008270,GO:0008479,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046483,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 ko:K00773 R03789,R10209 RC00063 ko00000,ko01000,ko03016 iECW_1372.ECW_m0475,iWFL_1372.ECW_m0475 Bacteria 1MUCA@1224,2KKC8@206350,2VIRX@28216,COG0343@1,COG0343@2 NA|NA|NA J Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) MAG.C3.5_00508 582744.Msip34_2232 1.8e-34 151.8 Nitrosomonadales yajC GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031522,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0071944 ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 Bacteria 1MZT2@1224,2KN55@206350,2VU6T@28216,COG1862@1,COG1862@2 NA|NA|NA U TIGRFAM preprotein translocase, YajC subunit MAG.C3.5_00509 582744.Msip34_2233 4.9e-273 946.8 Nitrosomonadales secD ko:K03072 ko03060,ko03070,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 2.A.6.4,3.A.5.2,3.A.5.7 Bacteria 1MV5U@1224,2KKD5@206350,2VHKD@28216,COG0342@1,COG0342@2 NA|NA|NA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA MAG.C3.5_00510 265072.Mfla_0511 1.4e-127 462.6 Nitrosomonadales secF GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 ko:K03072,ko:K03074,ko:K12257 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 2.A.6.4,3.A.5.2,3.A.5.7 Bacteria 1MU74@1224,2KKRN@206350,2VHZG@28216,COG0341@1,COG0341@2 NA|NA|NA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA MAG.C3.5_00511 582744.Msip34_2235 8.8e-174 616.7 Nitrosomonadales yfjD GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03699 ko00000,ko02042 Bacteria 1NZ99@1224,2KKES@206350,2WGFR@28216,COG4536@1,COG4536@2 NA|NA|NA P Transporter associated domain MAG.C3.5_00512 265072.Mfla_0509 7.7e-38 162.9 Nitrosomonadales clpS GO:0003674,GO:0005488,GO:0005515,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0050896,GO:0051087 ko:K06891 ko00000 Bacteria 1MZU8@1224,2KN4C@206350,2VSCU@28216,COG2127@1,COG2127@2 NA|NA|NA S Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation MAG.C3.5_00513 265072.Mfla_0508 0.0 1354.0 Nitrosomonadales clpA GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043335,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 ko:K03694 ko00000,ko03110 Bacteria 1MV8B@1224,2KKYH@206350,2VH1K@28216,COG0542@1,COG0542@2 NA|NA|NA O TIGRFAM ATP-dependent Clp protease ATP-binding subunit clpA MAG.C3.5_00514 582744.Msip34_2238 1.4e-58 232.6 Nitrosomonadales GSTO1 2.5.1.18 ko:K00799,ko:K07146 ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418 R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905 RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944 ko00000,ko00001,ko01000,ko02000 1.A.12.2.2,1.A.12.3.2 Bacteria 1RD2G@1224,2KMJY@206350,2VRS9@28216,COG0625@1,COG0625@2 NA|NA|NA O PFAM Glutathione S-transferase MAG.C3.5_00515 582744.Msip34_2239 1.3e-14 85.1 Betaproteobacteria Bacteria 1NCDQ@1224,2DPD6@1,2VWA7@28216,331K2@2 NA|NA|NA S Protein of unknown function (DUF2892) MAG.C3.5_00516 583345.Mmol_1944 1.5e-149 535.8 Nitrosomonadales pyrD GO:0000166,GO:0003674,GO:0003824,GO:0004152,GO:0004158,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0010181,GO:0016020,GO:0016491,GO:0016627,GO:0016634,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0032553,GO:0034641,GO:0034654,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0048037,GO:0050662,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 ko:K00254,ko:K02823,ko:K17828 ko00240,ko01100,map00240,map01100 M00051 R01868,R01869 RC00051 ko00000,ko00001,ko00002,ko01000 iEC042_1314.EC042_1029,iECIAI39_1322.ECIAI39_2202,iECUMN_1333.ECUMN_1134,iEcSMS35_1347.EcSMS35_2174,iPC815.YPO1415,iYL1228.KPN_00974 Bacteria 1MU7C@1224,2KM0T@206350,2VJ6H@28216,COG0167@1,COG0167@2 NA|NA|NA F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor MAG.C3.5_00517 1165096.ARWF01000001_gene2098 0.0 1323.9 Nitrosomonadales yoaE Bacteria 1NR6J@1224,2KMJA@206350,2VHHZ@28216,COG0243@1,COG0243@2 NA|NA|NA C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family MAG.C3.5_00518 1132855.KB913035_gene857 1.3e-46 192.2 Nitrosomonadales ko:K04751,ko:K04752 ko02020,map02020 ko00000,ko00001 Bacteria 1N32M@1224,2KMXR@206350,2VUEY@28216,COG0347@1,COG0347@2 NA|NA|NA K Belongs to the P(II) protein family MAG.C3.5_00519 582744.Msip34_2243 0.0 1689.9 Nitrosomonadales ko:K15726 ko00000,ko02000 2.A.6.1.2 Bacteria 1NUIV@1224,2KMJ1@206350,2VHCZ@28216,COG3696@1,COG3696@2 NA|NA|NA P AcrB/AcrD/AcrF family MAG.C3.5_00520 1132855.KB913035_gene857 1.5e-47 195.3 Nitrosomonadales ko:K04751,ko:K04752 ko02020,map02020 ko00000,ko00001 Bacteria 1N32M@1224,2KMXR@206350,2VUEY@28216,COG0347@1,COG0347@2 NA|NA|NA K Belongs to the P(II) protein family MAG.C3.5_00521 582744.Msip34_2245 2.3e-230 804.7 Nitrosomonadales ko:K15726 ko00000,ko02000 2.A.6.1.2 Bacteria 1NUIV@1224,2KMG8@206350,2VHCZ@28216,COG3696@1,COG3696@2 NA|NA|NA P Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family MAG.C3.5_00524 1217718.ALOU01000052_gene3044 4.8e-15 87.8 Betaproteobacteria Bacteria 1RKBI@1224,2VWK7@28216,COG3305@1,COG3305@2 NA|NA|NA S Predicted membrane protein (DUF2127) MAG.C3.5_00526 640081.Dsui_0754 3.6e-31 141.0 Rhodocyclales Bacteria 1NNNA@1224,2AIB9@1,2KZMP@206389,2W5SH@28216,33HJY@2 NA|NA|NA MAG.C3.5_00527 614083.AWQR01000022_gene119 4e-105 389.0 Comamonadaceae 3.4.21.105 ko:K19225 ko00000,ko01000,ko01002 Bacteria 1PRTS@1224,2VM82@28216,4AIP0@80864,COG0705@1,COG0705@2 NA|NA|NA S Rhomboid family MAG.C3.5_00528 265072.Mfla_0894 6.1e-20 103.2 Betaproteobacteria Bacteria 1NJ3D@1224,2EKBB@1,2VXMB@28216,33E1Q@2 NA|NA|NA MAG.C3.5_00529 312153.Pnuc_1610 1.3e-36 159.1 Burkholderiaceae Bacteria 1K9H8@119060,1MZVF@1224,2VUS5@28216,COG1403@1,COG1403@2 NA|NA|NA V HNH nucleases MAG.C3.5_00530 1454004.AW11_02382 2.7e-23 115.9 Betaproteobacteria addA 3.6.4.12 ko:K16898 ko00000,ko01000,ko03400 Bacteria 1QUUZ@1224,2WI1S@28216,COG1074@1,COG1074@2 NA|NA|NA L PDDEXK-like domain of unknown function (DUF3799) MAG.C3.5_00531 1101195.Meth11DRAFT_0226 9.3e-133 479.9 Nitrosomonadales 1.11.1.6 ko:K03781 ko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014 M00532 R00009,R00602,R02670 RC00034,RC00767,RC02141,RC02755 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUXZ@1224,2KMIJ@206350,2VR06@28216,COG0753@1,COG0753@2 NA|NA|NA P Has an organic peroxide-dependent peroxidase activity MAG.C3.5_00533 582744.Msip34_1315 3.8e-72 277.3 Nitrosomonadales queF 1.7.1.13 ko:K09457 ko00790,ko01100,map00790,map01100 R07605 RC01875 ko00000,ko00001,ko01000,ko03016 Bacteria 1MW0M@1224,2KMK5@206350,2VINU@28216,COG0780@1,COG0780@2 NA|NA|NA S Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) MAG.C3.5_00534 582744.Msip34_1316 4.3e-286 991.1 Nitrosomonadales smc ko:K03529 ko00000,ko03036 Bacteria 1MUAQ@1224,2KKSR@206350,2VJMF@28216,COG1196@1,COG1196@2 NA|NA|NA D Required for chromosome condensation and partitioning MAG.C3.5_00535 265072.Mfla_1402 1.8e-105 389.8 Nitrosomonadales zipA ko:K03528 ko00000,ko03036 Bacteria 1NJ6D@1224,2KKSC@206350,2VHQ7@28216,COG3115@1,COG3115@2 NA|NA|NA D Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins MAG.C3.5_00536 582744.Msip34_1318 3.3e-289 1000.7 Nitrosomonadales ligA GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003909,GO:0003911,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0034645,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050662,GO:0050896,GO:0051103,GO:0051287,GO:0051716,GO:0070403,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1901576 6.5.1.2 ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 R00382 RC00005 ko00000,ko00001,ko01000,ko03032,ko03400 iEC55989_1330.EC55989_2701,iECABU_c1320.ECABU_c27320,iECIAI1_1343.ECIAI1_2469,iECO103_1326.ECO103_2930,iECO111_1330.ECO111_3141,iECO26_1355.ECO26_3464,iECSE_1348.ECSE_2702,iECW_1372.ECW_m2640,iEKO11_1354.EKO11_1317,iEcE24377_1341.EcE24377A_2698,iEcSMS35_1347.EcSMS35_2566,iWFL_1372.ECW_m2640,iYL1228.KPN_02758,ic_1306.c2945 Bacteria 1MV3R@1224,2KMEH@206350,2VIDE@28216,COG0272@1,COG0272@2 NA|NA|NA L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA MAG.C3.5_00537 582744.Msip34_1319 3.7e-87 328.2 Nitrosomonadales cysQ GO:0000103,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008252,GO:0008441,GO:0008934,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016020,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019637,GO:0019693,GO:0030145,GO:0033865,GO:0033875,GO:0034032,GO:0034035,GO:0034641,GO:0042132,GO:0042578,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050308,GO:0050427,GO:0050897,GO:0052745,GO:0052834,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:1901135,GO:1901360,GO:1901564 3.1.3.25,3.1.3.7 ko:K01082,ko:K01092 ko00521,ko00562,ko00920,ko01100,ko01120,ko01130,ko04070,map00521,map00562,map00920,map01100,map01120,map01130,map04070 M00131 R00188,R00508,R01185,R01186,R01187 RC00078 ko00000,ko00001,ko00002,ko01000,ko03016 Bacteria 1N0GY@1224,2KMET@206350,2VJWH@28216,COG1218@1,COG1218@2 NA|NA|NA P Inositol monophosphatase family MAG.C3.5_00538 582744.Msip34_1320 1.2e-54 220.3 Nitrosomonadales Bacteria 1NB06@1224,2KN0Z@206350,2W6GC@28216,COG0457@1,COG0457@2 NA|NA|NA S Tetratricopeptide repeats MAG.C3.5_00539 582744.Msip34_1321 1.5e-143 515.8 Nitrosomonadales msrP ko:K07147 ko00000,ko01000 Bacteria 1MUW0@1224,2KKE6@206350,2VH08@28216,COG2041@1,COG2041@2 NA|NA|NA C Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide MAG.C3.5_00540 666681.M301_1375 1.8e-75 288.9 Nitrosomonadales msrQ ko:K17247 ko00000 Bacteria 1RDUP@1224,2KMMD@206350,2VRBQ@28216,COG2717@1,COG2717@2 NA|NA|NA C Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain MAG.C3.5_00541 666681.M301_1374 6.5e-58 230.3 Nitrosomonadales ko:K15977 ko00000 Bacteria 1RM2W@1224,2KMYZ@206350,2VWVB@28216,COG2259@1,COG2259@2 NA|NA|NA S PFAM DoxX family protein MAG.C3.5_00542 265072.Mfla_1406 2.4e-84 318.5 Nitrosomonadales cmpX Bacteria 1N2GE@1224,2KM1E@206350,2VUZW@28216,COG0668@1,COG0668@2 NA|NA|NA M PFAM Conserved TM helix MAG.C3.5_00543 1123393.KB891316_gene1935 3.8e-51 209.9 Betaproteobacteria Bacteria 1MU2C@1224,2VH3V@28216,COG5001@1,COG5001@2 NA|NA|NA T Diguanylate cyclase MAG.C3.5_00544 582744.Msip34_1711 6.3e-165 587.0 Nitrosomonadales bamB GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0008152,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0016491,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0042802,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0055114,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 ko:K17713 ko00000,ko02000 1.B.33.1 Bacteria 1MXIJ@1224,2KKMY@206350,2VHH5@28216,COG1520@1,COG1520@2 NA|NA|NA M Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane MAG.C3.5_00545 582744.Msip34_1712 7.5e-64 250.4 Nitrosomonadales yfgM GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0009897,GO:0009986,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031233,GO:0044425,GO:0044459,GO:0044464,GO:0071575,GO:0071944,GO:0098552 Bacteria 1N117@1224,2KMWQ@206350,2VSHE@28216,COG2976@1,COG2976@2 NA|NA|NA S Tetratricopeptide repeat-like domain MAG.C3.5_00546 666681.M301_0921 1.2e-109 402.9 Nitrosomonadales ko:K02032,ko:K10823 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1NU4K@1224,2KMCQ@206350,2W19X@28216,COG4608@1,COG4608@2 NA|NA|NA E PFAM ABC transporter MAG.C3.5_00547 582744.Msip34_1714 1.9e-123 448.7 Nitrosomonadales dppD ko:K02031,ko:K02032,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1R4KB@1224,2KKGX@206350,2W0NK@28216,COG0444@1,COG0444@2 NA|NA|NA EP Belongs to the ABC transporter superfamily MAG.C3.5_00548 1132855.KB913035_gene1867 2.3e-197 694.9 Nitrosomonadales hisS GO:0003674,GO:0003824,GO:0004812,GO:0004821,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006427,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.21 ko:K01892 ko00970,map00970 M00359,M00360 R03655 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iE2348C_1286.E2348C_2797,iECNA114_1301.ECNA114_2592,iECSF_1327.ECSF_2358 Bacteria 1MV2K@1224,2KKZY@206350,2VIGA@28216,COG0124@1,COG0124@2 NA|NA|NA J PFAM tRNA synthetase class II (G H P and S) MAG.C3.5_00549 582744.Msip34_1716 4.2e-202 710.7 Nitrosomonadales ispG GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009055,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0022900,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 ko:K03526 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R08689,R10859 RC01486 ko00000,ko00001,ko00002,ko01000 iJN678.gcpE Bacteria 1MUAX@1224,2KMH4@206350,2VID7@28216,COG0821@1,COG0821@2 NA|NA|NA I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate MAG.C3.5_00550 265072.Mfla_1621 6.5e-50 204.5 Nitrosomonadales ko:K15539 ko00000 Bacteria 1N240@1224,2KN0N@206350,2VVFV@28216,COG1426@1,COG1426@2 NA|NA|NA S Helix-turn-helix domain MAG.C3.5_00551 582744.Msip34_1718 3.7e-78 298.1 Nitrosomonadales pilF ko:K02656 ko00000,ko02035,ko02044 Bacteria 1MXPC@1224,2KMND@206350,2VNC8@28216,COG3063@1,COG3063@2 NA|NA|NA NU TIGRFAM type IV pilus biogenesis stability protein PilW MAG.C3.5_00552 1101195.Meth11DRAFT_0976 1e-180 639.4 Nitrosomonadales rlmN GO:0000049,GO:0000154,GO:0001510,GO:0002935,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016426,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0070040,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:0140102,GO:1901360,GO:1901363 2.1.1.192 ko:K06941 ko00000,ko01000,ko03009 Bacteria 1MUYK@1224,2KM5F@206350,2VIBN@28216,COG0820@1,COG0820@2 NA|NA|NA J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs MAG.C3.5_00553 1122236.KB905141_gene1063 4.6e-62 243.8 Nitrosomonadales ndk GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 ko:K00940 ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016 M00049,M00050,M00052,M00053 R00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895 RC00002 ko00000,ko00001,ko00002,ko01000,ko04131 Bacteria 1R9ZA@1224,2KMJQ@206350,2VQ2J@28216,COG0105@1,COG0105@2 NA|NA|NA F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate MAG.C3.5_00554 582744.Msip34_1721 1.1e-54 219.2 Nitrosomonadales rlmB GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 ko:K03218,ko:K03437,ko:K22132 ko00000,ko01000,ko03009,ko03016 Bacteria 1MWCM@1224,2KKG5@206350,2VHF4@28216,COG0566@1,COG0566@2 NA|NA|NA J Specifically methylates the ribose of guanosine 2251 in 23S rRNA MAG.C3.5_00555 582744.Msip34_1376 8e-24 116.7 Nitrosomonadales Bacteria 1P2VS@1224,2FF6I@1,2KN4X@206350,2W46G@28216,3474I@2 NA|NA|NA MAG.C3.5_00556 666681.M301_1351 1.9e-101 375.6 Nitrosomonadales phnP 2.3.1.181,3.1.4.55 ko:K03801,ko:K06167 ko00440,ko00785,ko01100,map00440,map00785,map01100 R07766,R07769,R10205 RC00039,RC00296,RC00992,RC02867 ko00000,ko00001,ko01000 Bacteria 1MVJH@1224,2KMIB@206350,2VKJK@28216,COG1235@1,COG1235@2 NA|NA|NA S Beta-lactamase superfamily domain MAG.C3.5_00557 265072.Mfla_1497 2.8e-113 414.8 Nitrosomonadales ycfH GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 ko:K03424 ko00000,ko01000 Bacteria 1MUC0@1224,2KKZF@206350,2VHCT@28216,COG0084@1,COG0084@2 NA|NA|NA L TIGRFAM hydrolase, TatD family MAG.C3.5_00558 666681.M301_1349 3.7e-47 194.1 Nitrosomonadales pilZ ko:K02676 ko00000,ko02035,ko02044 Bacteria 1RGWZ@1224,2KN0B@206350,2VT2B@28216,COG3215@1,COG3215@2 NA|NA|NA NU PFAM type IV pilus assembly PilZ MAG.C3.5_00559 582744.Msip34_1380 1.1e-93 350.1 Nitrosomonadales holB GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1MY1W@1224,2KKRR@206350,2VNED@28216,COG0470@1,COG0470@2 NA|NA|NA L TIGRFAM DNA polymerase III, delta MAG.C3.5_00560 1502770.JQMG01000001_gene2019 2.2e-76 292.0 Nitrosomonadales tmk GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 ko:K00943 ko00240,ko01100,map00240,map01100 M00053 R02094,R02098 RC00002 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV9C@1224,2KKXE@206350,2VQ24@28216,COG0125@1,COG0125@2 NA|NA|NA F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis MAG.C3.5_00561 265072.Mfla_1501 5.5e-125 454.1 Nitrosomonadales mltG GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006807,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0030203,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0042597,GO:0043170,GO:0044425,GO:0044459,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901564 ko:K07082 ko00000 Bacteria 1MUQF@1224,2KKWE@206350,2VHD4@28216,COG1559@1,COG1559@2 NA|NA|NA S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation MAG.C3.5_00562 666681.M301_1340 4e-81 308.1 Nitrosomonadales pabC GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008696,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0019842,GO:0030170,GO:0034641,GO:0036094,GO:0042558,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0070279,GO:0071704,GO:0097159,GO:1901360,GO:1901363,GO:1901564 2.6.1.42,4.1.3.38 ko:K00826,ko:K02619 ko00270,ko00280,ko00290,ko00770,ko00790,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map00790,map01100,map01110,map01130,map01210,map01230 M00019,M00036,M00119,M00570 R01090,R01214,R02199,R05553,R10991 RC00006,RC00036,RC01843,RC02148 ko00000,ko00001,ko00002,ko01000,ko01007 iAPECO1_1312.APECO1_177,iE2348C_1286.E2348C_1188,iECED1_1282.ECED1_1239,iECNA114_1301.ECNA114_1153,iECOK1_1307.ECOK1_1203,iECS88_1305.ECS88_1110,iECSF_1327.ECSF_0995,iECUMN_1333.ECUMN_1273,iJN746.PP_1917,iPC815.YPO1603,iUMN146_1321.UM146_11845,iUTI89_1310.UTI89_C1222,ic_1306.c1366 Bacteria 1MZAK@1224,2KMJW@206350,2VRAS@28216,COG0115@1,COG0115@2 NA|NA|NA EH PFAM Aminotransferase class IV MAG.C3.5_00563 582744.Msip34_1384 6.6e-213 746.5 Nitrosomonadales fabF GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033817,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.179 ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119 RC00039,RC02728,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 iAF1260.b1095,iAPECO1_1312.APECO1_176,iB21_1397.B21_01099,iBWG_1329.BWG_0943,iE2348C_1286.E2348C_1187,iEC042_1314.EC042_1165,iEC55989_1330.EC55989_1207,iECABU_c1320.ECABU_c13085,iECBD_1354.ECBD_2506,iECB_1328.ECB_01091,iECDH10B_1368.ECDH10B_1167,iECDH1ME8569_1439.ECDH1ME8569_1030,iECD_1391.ECD_01091,iECED1_1282.ECED1_1238,iECH74115_1262.ECH74115_1474,iECIAI1_1343.ECIAI1_1130,iECIAI39_1322.ECIAI39_2066,iECO103_1326.ECO103_1140,iECO111_1330.ECO111_1372,iECO26_1355.ECO26_1428,iECOK1_1307.ECOK1_1202,iECP_1309.ECP_1087,iECS88_1305.ECS88_1109,iECSE_1348.ECSE_1159,iECSF_1327.ECSF_0994,iECSP_1301.ECSP_1396,iECUMN_1333.ECUMN_1270,iECW_1372.ECW_m1203,iECs_1301.ECs1473,iEKO11_1354.EKO11_2739,iETEC_1333.ETEC_1160,iEcDH1_1363.EcDH1_2552,iEcE24377_1341.EcE24377A_1216,iEcSMS35_1347.EcSMS35_2032,iG2583_1286.G2583_1355,iJO1366.b1095,iJR904.b1095,iLF82_1304.LF82_0607,iNRG857_1313.NRG857_05280,iSF_1195.SF1099,iSFxv_1172.SFxv_1251,iS_1188.S1179,iUMN146_1321.UM146_11850,iWFL_1372.ECW_m1203,iY75_1357.Y75_RS05720,iZ_1308.Z1734,ic_1306.c1365 Bacteria 1MU1X@1224,2KMFU@206350,2VI6I@28216,COG0304@1,COG0304@2 NA|NA|NA I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP MAG.C3.5_00564 582744.Msip34_1385 4.8e-32 143.3 Nitrosomonadales acpP GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 ko:K02078 ko00000,ko00001 Bacteria 1MZ4P@1224,2KN5P@206350,2VTZH@28216,COG0236@1,COG0236@2 NA|NA|NA IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis MAG.C3.5_00565 582744.Msip34_1386 3.5e-100 371.3 Nitrosomonadales Bacteria 1MU6X@1224,2KMAU@206350,2VJ3S@28216,COG1028@1,COG1028@2 NA|NA|NA IQ TIGRFAM 3-oxoacyl-(acyl-carrier-protein) reductase MAG.C3.5_00566 1236959.BAMT01000001_gene1636 2.2e-128 465.3 Nitrosomonadales fabD GO:0003674,GO:0003824,GO:0004312,GO:0004314,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016417,GO:0016419,GO:0016420,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.39 ko:K00645 ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212 M00082 R01626,R11671 RC00004,RC00039,RC02727 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1MV6N@1224,2KKJT@206350,2VJF7@28216,COG0331@1,COG0331@2 NA|NA|NA I TIGRFAM malonyl CoA-acyl carrier protein transacylase MAG.C3.5_00567 582744.Msip34_1388 7.5e-148 530.0 Nitrosomonadales fabH GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.180 ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00082,M00083 R10707 RC00004,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 iAF1260.b1091,iAPECO1_1312.APECO1_172,iBWG_1329.BWG_0939,iE2348C_1286.E2348C_1183,iEC55989_1330.EC55989_1203,iECABU_c1320.ECABU_c13040,iECDH10B_1368.ECDH10B_1163,iECDH1ME8569_1439.ECDH1ME8569_1026,iECED1_1282.ECED1_1234,iECH74115_1262.ECH74115_1470,iECIAI39_1322.ECIAI39_2070,iECO103_1326.ECO103_1136,iECO111_1330.ECO111_1368,iECO26_1355.ECO26_1424,iECOK1_1307.ECOK1_1198,iECP_1309.ECP_1083,iECS88_1305.ECS88_1105,iECSP_1301.ECSP_1392,iECW_1372.ECW_m1199,iECs_1301.ECs1469,iEKO11_1354.EKO11_2743,iETEC_1333.ETEC_1156,iEcDH1_1363.EcDH1_2556,iEcE24377_1341.EcE24377A_1212,iEcSMS35_1347.EcSMS35_2036,iG2583_1286.G2583_1351,iJO1366.b1091,iJR904.b1091,iLF82_1304.LF82_0609,iNRG857_1313.NRG857_05260,iSSON_1240.SSON_1111,iSbBS512_1146.SbBS512_E2233,iUMN146_1321.UM146_11870,iUMNK88_1353.UMNK88_1361,iUTI89_1310.UTI89_C1216,iWFL_1372.ECW_m1199,iY75_1357.Y75_RS05700,iZ_1308.Z1730,ic_1306.c1360 Bacteria 1MU9N@1224,2KM2A@206350,2VI2A@28216,COG0332@1,COG0332@2 NA|NA|NA I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids MAG.C3.5_00568 582744.Msip34_1389 1.3e-161 575.9 Nitrosomonadales plsX GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0071704,GO:0090407,GO:1901576 2.3.1.15 ko:K03621 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R00851,R09380 RC00004,RC00039,RC00041 ko00000,ko00001,ko00002,ko01000,ko01004 iEcDH1_1363.EcDH1_2557,iSFxv_1172.SFxv_1246,iY75_1357.Y75_RS05695 Bacteria 1MVM3@1224,2KMA0@206350,2VI25@28216,COG0416@1,COG0416@2 NA|NA|NA I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA MAG.C3.5_00569 1101195.Meth11DRAFT_1221 4.2e-28 129.8 Nitrosomonadales rpmF GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 ko:K02911 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Bacteria 1N6RF@1224,2KN4T@206350,2VVP5@28216,COG0333@1,COG0333@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL32 family MAG.C3.5_00570 582744.Msip34_1391 2.5e-38 165.2 Nitrosomonadales yceD GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 ko:K07040 ko00000 Bacteria 1PGKW@1224,2KNA5@206350,2VUIG@28216,COG1399@1,COG1399@2 NA|NA|NA S Uncharacterized ACR, COG1399 MAG.C3.5_00571 582744.Msip34_1392 1.1e-256 892.1 Nitrosomonadales pycA 6.3.4.14,6.3.4.6,6.4.1.1,6.4.1.2 ko:K01941,ko:K01959,ko:K01961 ko00020,ko00061,ko00220,ko00620,ko00640,ko00720,ko00791,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko01230,map00020,map00061,map00220,map00620,map00640,map00720,map00791,map01100,map01110,map01120,map01130,map01200,map01212,map01230 M00082,M00173,M00376,M00620 R00344,R00742,R00774,R04385 RC00040,RC00253,RC00367,RC00378 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU4H@1224,2KME4@206350,2WH9U@28216,COG0439@1,COG0439@2 NA|NA|NA I PFAM Carbamoyl-phosphate synthase L chain MAG.C3.5_00572 1236959.BAMT01000001_gene1630 1.9e-288 998.0 Nitrosomonadales oadA 2.3.1.12,4.1.1.3,6.4.1.1,6.4.1.7 ko:K00627,ko:K01571,ko:K01960,ko:K20140 ko00010,ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map01230 M00173,M00307,M00620 R00209,R00217,R00344,R02569 RC00004,RC00040,RC00367,RC02742,RC02857 br01601,ko00000,ko00001,ko00002,ko01000,ko02000 3.B.1.1.1 iJN746.PP_5346,iLJ478.TM0128 Bacteria 1QTTG@1224,2KKYX@206350,2VKZP@28216,COG0511@1,COG0511@2,COG5016@1,COG5016@2 NA|NA|NA CI TIGRFAM oxaloacetate decarboxylase alpha subunit MAG.C3.5_00573 582744.Msip34_1394 3.8e-70 271.2 Nitrosomonadales maf GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0030312,GO:0044464,GO:0047429,GO:0071944 1.1.1.25,2.1.1.190 ko:K00014,ko:K03215,ko:K06287 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02413 RC00206 ko00000,ko00001,ko00002,ko01000,ko03009 Bacteria 1RDA9@1224,2KMKG@206350,2VQUQ@28216,COG0424@1,COG0424@2 NA|NA|NA D TIGRFAM maf protein MAG.C3.5_00574 1502770.JQMG01000001_gene2005 4.8e-199 700.7 Nitrosomonadales Bacteria 1QCVP@1224,2KKQV@206350,2VNEJ@28216,COG5316@1,COG5316@2 NA|NA|NA S Domain of unknown function (DUF4139) MAG.C3.5_00575 265072.Mfla_1515 1.1e-84 319.7 Nitrosomonadales rsmI_1 2.1.1.198 ko:K07056 ko00000,ko01000,ko03009 Bacteria 1RARW@1224,2KKRK@206350,2VQ34@28216,COG0313@1,COG0313@2 NA|NA|NA H PFAM Uroporphyrin-III C tetrapyrrole (Corrin Porphyrin) methyltransferase MAG.C3.5_00576 666681.M301_1326 1.9e-74 285.4 Nitrosomonadales rnhB GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Bacteria 1RA65@1224,2KMKS@206350,2VQ06@28216,COG0164@1,COG0164@2 NA|NA|NA L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids MAG.C3.5_00577 582744.Msip34_1398 3.4e-155 554.7 Nitrosomonadales lpxB GO:0003674,GO:0003824,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008194,GO:0008289,GO:0008610,GO:0008654,GO:0008915,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0019637,GO:0019897,GO:0019898,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 ko:K00748 ko00540,ko01100,map00540,map01100 M00060 R04606 RC00005,RC00059 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 GT19 iE2348C_1286.E2348C_0187,iEcolC_1368.EcolC_3478,iIT341.HP0867 Bacteria 1MVBI@1224,2KMDQ@206350,2VIBP@28216,COG0763@1,COG0763@2 NA|NA|NA M Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell MAG.C3.5_00578 1132855.KB913035_gene1440 1e-110 406.4 Nitrosomonadales lpxA 2.3.1.129 ko:K00677 ko00540,ko01100,ko01503,map00540,map01100,map01503 M00060 R04567 RC00039,RC00055 ko00000,ko00001,ko00002,ko01000,ko01005 iIT341.HP1375 Bacteria 1MUHQ@1224,2KM0C@206350,2VHDG@28216,COG1043@1,COG1043@2 NA|NA|NA M Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell MAG.C3.5_00579 582744.Msip34_1400 3e-78 297.7 Nitrosomonadales fabZ GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0008693,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019171,GO:0019752,GO:0032787,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0047451,GO:0071704,GO:0072330,GO:1901576 4.2.1.59 ko:K02372 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04428,R04535,R04537,R04544,R04568,R04954,R04965,R07764,R10117,R10121 RC00831,RC01095 ko00000,ko00001,ko00002,ko01000,ko01004 iJN746.PP_1602 Bacteria 1RH2T@1224,2KMMW@206350,2VRKQ@28216,COG0764@1,COG0764@2 NA|NA|NA I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs MAG.C3.5_00580 582744.Msip34_1401 2.5e-96 359.0 Nitrosomonadales lpxD GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 ko:K02536 ko00540,ko01100,map00540,map01100 M00060 R04550 RC00039,RC00166 ko00000,ko00001,ko00002,ko01000,ko01005 ic_1306.c0216 Bacteria 1MUX6@1224,2KKFR@206350,2VHJR@28216,COG1044@1,COG1044@2 NA|NA|NA M Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell MAG.C3.5_00581 582744.Msip34_1402 9.7e-65 253.1 Nitrosomonadales skp GO:0001530,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006457,GO:0006807,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009279,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0019867,GO:0022417,GO:0022607,GO:0030288,GO:0030312,GO:0030313,GO:0031647,GO:0031975,GO:0032978,GO:0033036,GO:0034613,GO:0042597,GO:0042802,GO:0043163,GO:0043165,GO:0043170,GO:0044085,GO:0044091,GO:0044238,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0050821,GO:0051082,GO:0051179,GO:0051205,GO:0051234,GO:0051604,GO:0051641,GO:0061024,GO:0061077,GO:0065007,GO:0065008,GO:0070727,GO:0071704,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0097367,GO:1901564 ko:K06142 ko00000 Bacteria 1RD8X@1224,2KMK3@206350,2VRZI@28216,COG2825@1,COG2825@2 NA|NA|NA M Belongs to the skp family MAG.C3.5_00582 582744.Msip34_1403 0.0 1312.4 Nitrosomonadales bamA GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 ko:K07277 ko00000,ko02000,ko03029 1.B.33 Bacteria 1MU0D@1224,2KMAN@206350,2VHTX@28216,COG4775@1,COG4775@2 NA|NA|NA M Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane MAG.C3.5_00583 582744.Msip34_1404 2e-103 382.5 Nitrosomonadales rseP GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006355,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016021,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0043170,GO:0043856,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0045152,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:0140110,GO:1901564,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 3.4.21.107 ko:K04771,ko:K11749 ko01503,ko02020,ko02024,ko04112,map01503,map02020,map02024,map04112 M00728 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 Bacteria 1MU91@1224,2KKRG@206350,2VHBW@28216,COG0750@1,COG0750@2 NA|NA|NA M Peptidase family M50 MAG.C3.5_00584 582744.Msip34_2803 0.0 2721.4 Nitrosomonadales gltB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14,1.4.7.1,2.1.1.21 ko:K00265,ko:K00284,ko:K22083 ko00250,ko00630,ko00680,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00680,map00910,map01100,map01110,map01120,map01130,map01230 R00021,R00093,R00114,R00248,R01586,R10086 RC00006,RC00010,RC00554,RC02799 ko00000,ko00001,ko01000 Bacteria 1MU7B@1224,2KM55@206350,2VHUY@28216,COG0067@1,COG0067@2,COG0069@1,COG0069@2,COG0070@1,COG0070@2 NA|NA|NA E glutamate synthase, alpha subunit domain protein MAG.C3.5_00585 582744.Msip34_2802 1.2e-204 719.2 Nitrosomonadales hemL GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016020,GO:0016853,GO:0016866,GO:0016869,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0040007,GO:0042168,GO:0042286,GO:0042440,GO:0042802,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 5.4.3.8 ko:K01845 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R02272 RC00677 ko00000,ko00001,ko00002,ko01000,ko01007 iSB619.SA_RS08395,iUMNK88_1353.UMNK88_158 Bacteria 1MUY5@1224,2KKPE@206350,2VHK9@28216,COG0001@1,COG0001@2 NA|NA|NA H PFAM Aminotransferase class-III MAG.C3.5_00586 582744.Msip34_2801 5.1e-68 264.2 Nitrosomonadales thiE GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 ko:K00788 ko00730,ko01100,map00730,map01100 M00127 R03223,R10712 RC00224,RC03255,RC03397 ko00000,ko00001,ko00002,ko01000 Bacteria 1RDSU@1224,2KMSI@206350,2VSR5@28216,COG0352@1,COG0352@2 NA|NA|NA H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) MAG.C3.5_00587 582744.Msip34_2800 4.5e-125 454.1 Nitrosomonadales thiD 2.7.1.49,2.7.4.7 ko:K00941 ko00730,ko01100,map00730,map01100 M00127 R03471,R04509 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU9J@1224,2KM6A@206350,2VKD2@28216,COG0351@1,COG0351@2 NA|NA|NA H PFAM Phosphomethylpyrimidine kinase MAG.C3.5_00589 582744.Msip34_2782 6.6e-134 483.4 Nitrosomonadales thiG GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 ko:K03149 ko00730,ko01100,map00730,map01100 R10247 RC03096,RC03097,RC03461 ko00000,ko00001,ko01000 Bacteria 1N0N5@1224,2KKDX@206350,2VJ8T@28216,COG2022@1,COG2022@2 NA|NA|NA H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S MAG.C3.5_00590 1236959.BAMT01000007_gene2715 8.4e-50 203.0 Nitrosomonadales apaG ko:K06195 ko00000 Bacteria 1MZ2Z@1224,2KMYJ@206350,2VSPE@28216,COG2967@1,COG2967@2 NA|NA|NA P ApaG domain MAG.C3.5_00591 582744.Msip34_2780 1.6e-150 539.3 Nitrosomonadales mltA GO:0000270,GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009279,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016787,GO:0016798,GO:0019867,GO:0030203,GO:0030288,GO:0030312,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0042597,GO:0043170,GO:0044425,GO:0044459,GO:0044462,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 ko:K08304 ko00000,ko01000,ko01011 GH102 iECABU_c1320.ECABU_c30840 Bacteria 1MXD4@1224,2KM9X@206350,2VHBF@28216,COG2821@1,COG2821@2 NA|NA|NA M MltA specific insert domain MAG.C3.5_00592 265072.Mfla_2634 6.1e-100 370.5 Nitrosomonadales ygiD 1.13.11.8 ko:K04100,ko:K15777 ko00362,ko00624,ko00627,ko00965,ko01120,map00362,map00624,map00627,map00965,map01120 R01632,R03550,R04280,R08836,R09565 RC00233,RC00387,RC00535,RC02567,RC02694 br01602,ko00000,ko00001,ko01000 Bacteria 1MXJZ@1224,2KM6Z@206350,2VIC3@28216,COG3384@1,COG3384@2 NA|NA|NA S Catalytic LigB subunit of aromatic ring-opening dioxygenase MAG.C3.5_00593 1387312.BAUS01000010_gene126 4.2e-41 174.1 Nitrosomonadales ko:K15977 ko00000 Bacteria 1MZVP@1224,2KN69@206350,2VSDZ@28216,COG2259@1,COG2259@2 NA|NA|NA S SURF4 family MAG.C3.5_00594 265072.Mfla_2632 1.6e-112 412.5 Nitrosomonadales Bacteria 1MW16@1224,2KP4Z@206350,2VQR6@28216,COG0583@1,COG0583@2 NA|NA|NA K LysR substrate binding domain MAG.C3.5_00595 582744.Msip34_2774 9.6e-161 573.2 Nitrosomonadales lplT ko:K08227 ko00000,ko02000 2.A.1.42 Bacteria 1QTWR@1224,2KNK7@206350,2WGR1@28216,COG0477@1,COG2814@2 NA|NA|NA EGP Major Facilitator Superfamily MAG.C3.5_00596 1502770.JQMG01000001_gene778 1.6e-130 472.2 Nitrosomonadales aas GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0008779,GO:0008922,GO:0009058,GO:0009987,GO:0015645,GO:0016020,GO:0016021,GO:0016740,GO:0016746,GO:0016747,GO:0016874,GO:0016877,GO:0016878,GO:0019637,GO:0019752,GO:0031224,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044425,GO:0044464,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.3.1.40,6.2.1.20 ko:K05939 ko00071,ko00564,map00071,map00564 R01406,R04864 RC00014,RC00039,RC00041 ko00000,ko00001,ko01000 iEC042_1314.EC042_3034 Bacteria 1MWDY@1224,2KMIC@206350,2VK7T@28216,COG0204@1,COG0204@2,COG0318@1,COG0318@2 NA|NA|NA IQ PFAM AMP-dependent synthetase and ligase MAG.C3.5_00597 666681.M301_0163 6.4e-78 297.4 Nitrosomonadales cobS GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008818,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.8.26 ko:K02233 ko00860,ko01100,map00860,map01100 M00122 R05223,R11174 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 Bacteria 1RHCC@1224,2KM2D@206350,2VS93@28216,COG0368@1,COG0368@2 NA|NA|NA H Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate MAG.C3.5_00598 1132855.KB913035_gene2590 4.1e-131 474.6 Nitrosomonadales cobT GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 ko:K00768 ko00860,ko01100,map00860,map01100 M00122 R04148 RC00033,RC00063 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVAM@1224,2KKVN@206350,2VJTR@28216,COG2038@1,COG2038@2 NA|NA|NA H Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) MAG.C3.5_00600 666681.M301_0160 3.2e-34 151.0 Nitrosomonadales Bacteria 1PEUP@1224,2KN6X@206350,2WAFD@28216,COG0607@1,COG0607@2 NA|NA|NA P Rhodanese Homology Domain MAG.C3.5_00601 582744.Msip34_0094 2e-28 131.3 Nitrosomonadales tusA ko:K04085 ko04122,map04122 ko00000,ko00001,ko01000,ko03016 Bacteria 1MZA5@1224,2KNBD@206350,2VVW5@28216,COG0425@1,COG0425@2 NA|NA|NA O Belongs to the sulfur carrier protein TusA family MAG.C3.5_00602 1038862.KB893857_gene6791 1.3e-108 399.4 Bradyrhizobiaceae Bacteria 1MUCH@1224,2TQRM@28211,3JVZ4@41294,COG1028@1,COG1028@2 NA|NA|NA IQ Enoyl-(Acyl carrier protein) reductase MAG.C3.5_00603 1538295.JY96_09470 4.1e-51 208.0 unclassified Burkholderiales ko:K16137 ko00000,ko03000 Bacteria 1KMH5@119065,1N1Q3@1224,2W9VG@28216,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family MAG.C3.5_00604 1502770.JQMG01000001_gene57 1e-17 95.5 Nitrosomonadales bfd ko:K00360,ko:K02192 ko00910,ko01120,map00910,map01120 M00531 R00798 RC02812 ko00000,ko00001,ko00002,ko01000 Bacteria 1NJSX@1224,2KNC7@206350,2W6K6@28216,COG1251@1,COG1251@2 NA|NA|NA C PFAM BFD domain protein 2Fe-2S -binding domain protein MAG.C3.5_00605 1132855.KB913035_gene1356 6.9e-122 443.7 Nitrosomonadales ko:K16259 ko00680,ko01120,map00680,map01120 ko00000,ko00001 Bacteria 1MX8R@1224,2KMFJ@206350,2VPW9@28216,COG2304@1,COG2304@2 NA|NA|NA S von Willebrand factor (vWF) type A domain MAG.C3.5_00606 1502770.JQMG01000001_gene1922 8.7e-67 259.6 Nitrosomonadales Bacteria 1RFH5@1224,29IZA@1,2KMSX@206350,2W7Z1@28216,305WS@2 NA|NA|NA MAG.C3.5_00607 1502770.JQMG01000001_gene1923 4.9e-121 441.0 Nitrosomonadales nphR Bacteria 1MXT9@1224,2KKXZ@206350,2VK2J@28216,COG2207@1,COG2207@2 NA|NA|NA K AraC-binding-like domain MAG.C3.5_00608 582744.Msip34_0477 1.2e-41 176.0 Betaproteobacteria ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Bacteria 1N1RF@1224,2VT18@28216,COG0071@1,COG0071@2 NA|NA|NA O Belongs to the small heat shock protein (HSP20) family MAG.C3.5_00609 1236959.BAMT01000006_gene263 6.4e-181 640.2 Nitrosomonadales valS GO:0000287,GO:0002161,GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006417,GO:0006418,GO:0006438,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016070,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0034248,GO:0034250,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045727,GO:0045903,GO:0046483,GO:0046872,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0052689,GO:0060255,GO:0061475,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:2000112 6.1.1.9 ko:K01873 ko00970,map00970 M00359,M00360 R03665 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iECH74115_1262.ECH74115_5779,iECNA114_1301.ECNA114_4481,iECO26_1355.ECO26_5428,iECSP_1301.ECSP_5359,iECs_1301.ECs5235,iG2583_1286.G2583_5088,iJN746.PP_0977,iSBO_1134.SBO_4182,iSSON_1240.SSON_4443,iYL1228.KPN_04663,iZ_1308.Z5870 Bacteria 1MV7B@1224,2KMDC@206350,2VH5Z@28216,COG0525@1,COG0525@2 NA|NA|NA J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner MAG.C3.5_00610 326442.PSHAa1036 1.5e-27 129.4 Gammaproteobacteria Bacteria 1R8VC@1224,1S5UD@1236,2C3WA@1,2Z8P1@2 NA|NA|NA MAG.C3.5_00612 261292.Nit79A3_1503 2.5e-50 204.9 Betaproteobacteria soxR Bacteria 1RGW6@1224,2VRHE@28216,COG0789@1,COG0789@2 NA|NA|NA K regulatory protein, MerR MAG.C3.5_00613 1005048.CFU_0019 7.2e-78 297.0 Oxalobacteraceae tpm 2.1.1.67 ko:K00569 ko00983,map00983 R08236,R08239,R08246 RC00003,RC00980,RC02277 ko00000,ko00001,ko01000 Bacteria 1RAE4@1224,2VTM1@28216,477P4@75682,COG0500@1,COG0500@2 NA|NA|NA J Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family MAG.C3.5_00614 595537.Varpa_2217 2e-14 86.7 Proteobacteria Bacteria 1P7P0@1224,291DY@1,2ZP0S@2 NA|NA|NA MAG.C3.5_00615 1236959.BAMT01000008_gene2490 3.6e-37 161.8 Betaproteobacteria Bacteria 1PATY@1224,292J1@1,2W6IF@28216,2ZQ32@2 NA|NA|NA MAG.C3.5_00616 1218352.B597_002160 3.6e-47 194.5 Gammaproteobacteria Bacteria 1MZEJ@1224,1SY96@1236,COG1846@1,COG1846@2 NA|NA|NA K helix_turn_helix multiple antibiotic resistance protein MAG.C3.5_00617 1123242.JH636434_gene3507 1.4e-39 169.1 Planctomycetes Bacteria 2J0Y8@203682,COG5562@1,COG5562@2 NA|NA|NA S phage envelope protein MAG.C3.5_00618 640081.Dsui_0579 7.6e-48 196.8 Rhodocyclales VV2066 ko:K07088 ko00000 Bacteria 1P2SH@1224,2KU7D@206389,2VNH9@28216,COG0679@1,COG0679@2 NA|NA|NA S Membrane transport protein MAG.C3.5_00622 265072.Mfla_0090 1.4e-76 293.1 Nitrosomonadales Bacteria 1QV1U@1224,2DKZI@1,2KP95@206350,2VQ0G@28216,310D6@2 NA|NA|NA MAG.C3.5_00623 1236959.BAMT01000006_gene260 1.4e-69 269.2 Nitrosomonadales lemA ko:K03744 ko00000 Bacteria 1R9YG@1224,2KNHA@206350,2VQ2A@28216,COG1704@1,COG1704@2 NA|NA|NA S LemA family MAG.C3.5_00624 666681.M301_0154 5.4e-45 187.2 Nitrosomonadales ko:K07340 ko00000 Bacteria 1N4FG@1224,2KN1A@206350,2VTGB@28216,COG1585@1,COG1585@2 NA|NA|NA OU NfeD-like C-terminal, partner-binding MAG.C3.5_00625 265072.Mfla_0086 1.9e-99 369.0 Nitrosomonadales hflC Bacteria 1MUM8@1224,2KMA2@206350,2VHBD@28216,COG0330@1,COG0330@2 NA|NA|NA O prohibitin homologues MAG.C3.5_00626 582744.Msip34_1047 8.1e-16 89.0 Nitrosomonadales Bacteria 1Q7EI@1224,2EGMT@1,2KN8J@206350,2VZ0N@28216,31BJK@2 NA|NA|NA S Phospholipase_D-nuclease N-terminal MAG.C3.5_00627 1165096.ARWF01000001_gene1412 9.4e-114 416.4 Nitrosomonadales moeB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0061605,GO:0070566,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.73,2.7.7.80 ko:K03148,ko:K21029 ko00730,ko01100,ko04122,map00730,map01100,map04122 R07459 RC00043 ko00000,ko00001,ko01000 iECIAI1_1343.ECIAI1_0865,iECW_1372.ECW_m0884,iEKO11_1354.EKO11_3059,iETEC_1333.ETEC_0893,iEcE24377_1341.EcE24377A_0897,iEcSMS35_1347.EcSMS35_0851,iWFL_1372.ECW_m0884 Bacteria 1MW7H@1224,2KKRE@206350,2VI1U@28216,COG0476@1,COG0476@2 NA|NA|NA H PFAM UBA THIF-type NAD FAD binding protein MAG.C3.5_00628 666681.M301_0151 2.1e-49 202.6 Nitrosomonadales ko:K02456,ko:K10924,ko:K12285 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1RIBU@1224,2KMUC@206350,2VUK8@28216,COG2165@1,COG2165@2 NA|NA|NA NU Prokaryotic N-terminal methylation motif MAG.C3.5_00629 1165096.ARWF01000001_gene2365 1.4e-72 279.3 Nitrosomonadales frlR ko:K03710 ko00000,ko03000 Bacteria 1MUEB@1224,2KM9E@206350,2VJ6N@28216,COG2188@1,COG2188@2 NA|NA|NA K PFAM UbiC transcription regulator-associated domain protein MAG.C3.5_00630 666681.M301_0693 2.3e-178 631.7 Nitrosomonadales maeB 1.1.1.38,1.1.1.40 ko:K00027,ko:K00029 ko00620,ko00710,ko01100,ko01120,ko01200,ko02020,map00620,map00710,map01100,map01120,map01200,map02020 M00169,M00172 R00214,R00216 RC00105 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU0A@1224,2KMFE@206350,2VIYB@28216,COG0281@1,COG0281@2 NA|NA|NA C PFAM malic protein NAD-binding MAG.C3.5_00631 1101195.Meth11DRAFT_1844 2.4e-26 125.2 Nitrosomonadales sdhC GO:0000104,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0008177,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0016635,GO:0017004,GO:0020037,GO:0022607,GO:0022900,GO:0034622,GO:0043933,GO:0044085,GO:0044237,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0048038,GO:0048039,GO:0055114,GO:0065003,GO:0071840,GO:0071944,GO:0097159,GO:1901363 ko:K00241 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002 iSF_1195.SF0576,iS_1188.S0589 Bacteria 1RIGZ@1224,2KN5Q@206350,2VWRY@28216,COG2009@1,COG2009@2 NA|NA|NA C TIGRFAM succinate dehydrogenase, cytochrome b556 subunit MAG.C3.5_00632 323848.Nmul_A0862 5.7e-21 107.1 Nitrosomonadales sdhD GO:0000104,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0016999,GO:0017004,GO:0017144,GO:0019752,GO:0020037,GO:0022607,GO:0022900,GO:0032991,GO:0034622,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0065003,GO:0070469,GO:0070470,GO:0071704,GO:0071840,GO:0071944,GO:0072350,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901363,GO:1902494,GO:1990204 ko:K00242 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173 R02164 RC00045 ko00000,ko00001,ko00002 e_coli_core.b0722,iAF1260.b0722,iAPECO1_1312.APECO1_1356,iB21_1397.B21_00671,iBWG_1329.BWG_0581,iE2348C_1286.E2348C_0602,iEC042_1314.EC042_0740,iECABU_c1320.ECABU_c07680,iECBD_1354.ECBD_2938,iECB_1328.ECB_00682,iECDH10B_1368.ECDH10B_0789,iECDH1ME8569_1439.ECDH1ME8569_0681,iECD_1391.ECD_00682,iECED1_1282.ECED1_0692,iECIAI1_1343.ECIAI1_0696,iECIAI39_1322.ECIAI39_0680,iECNA114_1301.ECNA114_0658,iECO103_1326.ECO103_0716,iECO111_1330.ECO111_0739,iECO26_1355.ECO26_0783,iECOK1_1307.ECOK1_0722,iECP_1309.ECP_0734,iECS88_1305.ECS88_0748,iECSE_1348.ECSE_0782,iECSF_1327.ECSF_0655,iECUMN_1333.ECUMN_0800,iECW_1372.ECW_m0777,iEKO11_1354.EKO11_3157,iETEC_1333.ETEC_0733,iEcDH1_1363.EcDH1_2913,iEcE24377_1341.EcE24377A_0749,iEcHS_1320.EcHS_A0770,iEcSMS35_1347.EcSMS35_0735,iEcolC_1368.EcolC_2933,iJO1366.b0722,iJR904.b0722,iLF82_1304.LF82_2100,iNRG857_1313.NRG857_03215,iSBO_1134.SBO_0580,iSDY_1059.SDY_0660,iSFV_1184.SFV_0613,iSF_1195.SF0575,iSFxv_1172.SFxv_0634,iSSON_1240.SSON_0673,iS_1188.S0588,iUMN146_1321.UM146_14010,iUMNK88_1353.UMNK88_758,iUTI89_1310.UTI89_C0718,iWFL_1372.ECW_m0777,iY75_1357.Y75_RS03755,ic_1306.c0800 Bacteria 1MZR9@1224,2VSJN@28216,373DV@32003,COG2142@1,COG2142@2 NA|NA|NA C Succinate dehydrogenase/Fumarate reductase transmembrane subunit MAG.C3.5_00633 1502770.JQMG01000001_gene75 3.6e-257 894.0 Nitrosomonadales sdhA GO:0000104,GO:0000166,GO:0001539,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006113,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022607,GO:0022900,GO:0030030,GO:0030031,GO:0032991,GO:0033554,GO:0036094,GO:0040011,GO:0043167,GO:0043168,GO:0043436,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044780,GO:0044781,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045283,GO:0045284,GO:0045333,GO:0048037,GO:0048870,GO:0050660,GO:0050662,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0070925,GO:0071704,GO:0071840,GO:0071944,GO:0071949,GO:0071973,GO:0072350,GO:0097159,GO:0097588,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 ko:K00239 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000 iE2348C_1286.E2348C_0603,iJN746.PP_4191,iPC815.YPO1111 Bacteria 1MU5M@1224,2KM76@206350,2VHM6@28216,COG1053@1,COG1053@2 NA|NA|NA C Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily MAG.C3.5_00634 583345.Mmol_0760 1.8e-106 392.1 Nitrosomonadales sdhB GO:0000104,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0022904,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0051536,GO:0051537,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 ko:K00240 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000 e_coli_core.b0724,iAF1260.b0724,iBWG_1329.BWG_0583,iEC042_1314.EC042_0742,iECDH10B_1368.ECDH10B_0791,iECDH1ME8569_1439.ECDH1ME8569_0683,iECUMN_1333.ECUMN_0802,iEcDH1_1363.EcDH1_2911,iJO1366.b0724,iJR904.b0724,iY75_1357.Y75_RS03765 Bacteria 1MVHS@1224,2KNHF@206350,2VIKC@28216,COG0479@1,COG0479@2 NA|NA|NA C Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family MAG.C3.5_00635 1387312.BAUS01000012_gene1967 7e-11 73.2 Nitrosomonadales sdhE GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006105,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016043,GO:0016999,GO:0017013,GO:0017144,GO:0018065,GO:0018293,GO:0019538,GO:0019752,GO:0022607,GO:0034552,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0043648,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0045333,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0072350,GO:1901564 1.3.5.1,1.3.5.4 ko:K00240,ko:K09159 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000,ko02048 Bacteria 1N7P4@1224,2KN8Y@206350,2VY7W@28216,COG2938@1,COG2938@2 NA|NA|NA S Flavinator of succinate dehydrogenase MAG.C3.5_00636 1132855.KB913035_gene2044 2.1e-176 625.2 Nitrosomonadales 4.1.3.25,4.1.3.34 ko:K01644,ko:K18292 ko00660,ko01100,ko02020,map00660,map01100,map02020 R00237,R00362 RC00067,RC00502,RC01118,RC01205 ko00000,ko00001,ko01000 Bacteria 1PCZW@1224,2KME9@206350,2W07M@28216,COG2301@1,COG2301@2 NA|NA|NA G HpcH/HpaI aldolase/citrate lyase family MAG.C3.5_00637 582744.Msip34_2349 1.9e-119 435.6 Nitrosomonadales pip 3.4.11.5 ko:K01259 ko00330,map00330 R00135 ko00000,ko00001,ko01000,ko01002 Bacteria 1MWW8@1224,2KM4G@206350,2VIEF@28216,COG0596@1,COG0596@2 NA|NA|NA E Belongs to the peptidase S33 family MAG.C3.5_00638 582744.Msip34_2350 2.6e-167 595.1 Nitrosomonadales ko:K03455,ko:K07058 ko00000 2.A.37 Bacteria 1PWBZ@1224,2KKMG@206350,2VY5Z@28216,COG0664@1,COG0664@2,COG1295@1,COG1295@2 NA|NA|NA T Virulence factor BrkB MAG.C3.5_00640 582744.Msip34_2380 7.6e-309 1065.8 Nitrosomonadales rpoD ko:K03086 ko00000,ko03021 Bacteria 1MVNJ@1224,2KM37@206350,2VH74@28216,COG0568@1,COG0568@2 NA|NA|NA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth MAG.C3.5_00641 582744.Msip34_2381 5.8e-255 886.7 Nitrosomonadales dnaG GO:0003674,GO:0003824,GO:0003896,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Bacteria 1MUHC@1224,2KMBJ@206350,2VHI9@28216,COG0358@1,COG0358@2 NA|NA|NA L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication MAG.C3.5_00642 582744.Msip34_2382 2.7e-55 221.5 Nitrosomonadales yqeY ko:K09117 ko00000 Bacteria 1RGZS@1224,2KMWB@206350,2VR35@28216,COG1610@1,COG1610@2 NA|NA|NA S Yqey-like protein MAG.C3.5_00643 583345.Mmol_1925 5.6e-63 247.7 Betaproteobacteria 2.7.7.65 ko:K13069 R08057 ko00000,ko01000 Bacteria 1MZV7@1224,2WEG8@28216,COG2199@1,COG3706@2 NA|NA|NA T PFAM GGDEF domain containing protein MAG.C3.5_00644 1492738.FEM21_16780 9.5e-81 307.0 Flavobacterium modC 3.6.3.29 ko:K02017,ko:K02018 ko02010,map02010 M00189 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.8 Bacteria 1IKAP@117743,2NUZQ@237,4PMQA@976,COG1118@1,COG1118@2 NA|NA|NA P SMART ATPases associated with a variety of cellular activities MAG.C3.5_00645 1095769.CAHF01000006_gene1733 1.4e-76 292.7 Oxalobacteraceae modB ko:K02018,ko:K15496 ko02010,map02010 M00189,M00423 ko00000,ko00001,ko00002,ko02000 3.A.1.6.5,3.A.1.8 Bacteria 1MUXR@1224,2VIZW@28216,4731K@75682,COG4149@1,COG4149@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component MAG.C3.5_00646 653733.Selin_1853 2e-17 95.5 Bacteria modE ko:K02019 ko00000,ko03000 Bacteria COG4148@1,COG4148@2 NA|NA|NA P Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system MAG.C3.5_00647 1122236.KB905142_gene387 1.1e-96 359.8 Nitrosomonadales modA ko:K02020 ko02010,map02010 M00189 ko00000,ko00001,ko00002,ko02000 3.A.1.8 Bacteria 1MVNA@1224,2KN5C@206350,2VJEC@28216,COG0725@1,COG0725@2 NA|NA|NA P Bacterial extracellular solute-binding protein MAG.C3.5_00648 582744.Msip34_2149 5.8e-107 394.8 Nitrosomonadales ko:K07221 ko00000,ko02000 1.B.5.1 Bacteria 1R9AP@1224,2KNN1@206350,2W0HU@28216,COG3746@1,COG3746@2 NA|NA|NA P PFAM phosphate-selective porin O and P MAG.C3.5_00649 1434929.X946_3555 1.1e-64 253.4 Burkholderiaceae modE ko:K02019,ko:K05772 ko02010,map02010 M00186 ko00000,ko00001,ko00002,ko02000,ko03000 3.A.1.6.2,3.A.1.6.4 Bacteria 1K2CT@119060,1P9SX@1224,2VMCH@28216,COG2005@1,COG2005@2,COG3585@1,COG3585@2 NA|NA|NA H Transcriptional regulator MAG.C3.5_00650 1236959.BAMT01000001_gene1109 9.8e-71 272.7 Nitrosomonadales slyD 5.2.1.8 ko:K03775 ko00000,ko01000,ko03110 Bacteria 1RD35@1224,2KMMG@206350,2VQA2@28216,COG1047@1,COG1047@2 NA|NA|NA O Peptidyl-prolyl cis-trans isomerase MAG.C3.5_00651 1000565.METUNv1_01303 2e-251 875.5 Rhodocyclales Bacteria 1MU2C@1224,2KV5K@206389,2VH3V@28216,COG5001@1,COG5001@2 NA|NA|NA T Putative diguanylate phosphodiesterase MAG.C3.5_00652 582744.Msip34_1817 3.7e-90 337.8 Nitrosomonadales mutS GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 ko:K03555 ko03430,map03430 ko00000,ko00001,ko03400 Bacteria 1MUGX@1224,2KKXU@206350,2VI3Z@28216,COG0249@1,COG0249@2 NA|NA|NA L that it carries out the mismatch recognition step. This protein has a weak ATPase activity MAG.C3.5_00653 582744.Msip34_0188 1.3e-57 229.6 Nitrosomonadales Bacteria 1RFY7@1224,29CX4@1,2KN1E@206350,2VR98@28216,2ZZV8@2 NA|NA|NA S Domain of unknown function (DUF4390) MAG.C3.5_00654 582744.Msip34_0187 7.3e-162 577.0 Nitrosomonadales sun GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.176 ko:K03500 ko00000,ko01000,ko03009 Bacteria 1MWPE@1224,2KKZV@206350,2VI4V@28216,COG0144@1,COG0144@2 NA|NA|NA J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA MAG.C3.5_00655 582744.Msip34_0186 7.1e-126 456.8 Nitrosomonadales htpX ko:K03799 M00743 ko00000,ko00002,ko01000,ko01002 Bacteria 1MUV4@1224,2KP6G@206350,2VIVB@28216,COG0501@1,COG0501@2 NA|NA|NA O Peptidase family M48 MAG.C3.5_00656 582744.Msip34_0185 8.2e-131 473.4 Nitrosomonadales fmt GO:0003674,GO:0003824,GO:0004479,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006418,GO:0006431,GO:0006464,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019752,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.1.176,2.1.2.9 ko:K00604,ko:K03500 ko00670,ko00970,map00670,map00970 R03940 RC00026,RC00165 ko00000,ko00001,ko01000,ko03009 iECABU_c1320.ECABU_c37050,iECUMN_1333.ECUMN_3761,ic_1306.c4048 Bacteria 1MU4Q@1224,2KMBC@206350,2VIS2@28216,COG0223@1,COG0223@2 NA|NA|NA J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus MAG.C3.5_00657 582744.Msip34_0184 3.5e-72 277.7 Nitrosomonadales def GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008270,GO:0008463,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043021,GO:0043022,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046872,GO:0046914,GO:0071704,GO:1901564 3.5.1.88 ko:K01462 ko00000,ko01000 Bacteria 1RA2P@1224,2KMM5@206350,2VQ4N@28216,COG0242@1,COG0242@2 NA|NA|NA J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions MAG.C3.5_00658 265072.Mfla_0188 5.6e-118 431.0 Nitrosomonadales lysM Bacteria 1MUBV@1224,2KMAE@206350,2VIZJ@28216,COG1652@1,COG1652@2 NA|NA|NA S Lysin motif MAG.C3.5_00659 1165096.ARWF01000001_gene1383 2e-128 465.7 Nitrosomonadales dprA ko:K04096 ko00000 Bacteria 1MVF6@1224,2KKV6@206350,2VH3W@28216,COG0758@1,COG0758@2 NA|NA|NA LU TIGRFAM DNA protecting protein DprA MAG.C3.5_00660 582744.Msip34_0181 4.5e-58 230.7 Nitrosomonadales smg ko:K03747 ko00000 Bacteria 1RD5F@1224,2KMZS@206350,2VRJF@28216,COG2922@1,COG2922@2 NA|NA|NA S Belongs to the Smg family MAG.C3.5_00661 265072.Mfla_0191 1.3e-122 446.0 Nitrosomonadales metF GO:0000166,GO:0003674,GO:0003824,GO:0004489,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019438,GO:0019752,GO:0022607,GO:0034641,GO:0036094,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071949,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.5.1.20 ko:K00297 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523 M00377 R01224,R07168 RC00081 ko00000,ko00001,ko00002,ko01000 iPC815.YPO0117,iSBO_1134.SBO_3961 Bacteria 1MUC9@1224,2KKNI@206350,2VHHI@28216,COG0685@1,COG0685@2 NA|NA|NA E TIGRFAM 5,10-methylenetetrahydrofolate reductase MAG.C3.5_00662 1236959.BAMT01000006_gene369 4.6e-39 167.2 Nitrosomonadales yvlD ko:K08972 ko00000 Bacteria 1N1DF@1224,2KN4A@206350,2VUY1@28216,COG1950@1,COG1950@2 NA|NA|NA S PFAM Membrane protein of MAG.C3.5_00663 582744.Msip34_0178 5e-257 893.3 Nitrosomonadales ahcY GO:0000096,GO:0000097,GO:0000166,GO:0001666,GO:0002376,GO:0002437,GO:0002439,GO:0002544,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006152,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009164,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016053,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017076,GO:0017144,GO:0019439,GO:0019510,GO:0019752,GO:0030554,GO:0031667,GO:0033353,GO:0034641,GO:0034655,GO:0034656,GO:0036094,GO:0036293,GO:0042219,GO:0042221,GO:0042278,GO:0042454,GO:0042745,GO:0042802,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046130,GO:0046394,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046700,GO:0048037,GO:0048511,GO:0048512,GO:0050662,GO:0050667,GO:0050896,GO:0051186,GO:0051187,GO:0051287,GO:0055086,GO:0070482,GO:0071268,GO:0071704,GO:0072521,GO:0072523,GO:0097159,GO:0097458,GO:0098604,GO:0120025,GO:1901135,GO:1901136,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901657,GO:1901658 3.3.1.1 ko:K01251 ko00270,ko01100,map00270,map01100 M00035 R00192,R04936 RC00056,RC00069,RC01161,RC01243 ko00000,ko00001,ko00002,ko01000,ko01009,ko04147 Bacteria 1MUQ2@1224,2KMCP@206350,2VH57@28216,COG0499@1,COG0499@2 NA|NA|NA H May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine MAG.C3.5_00664 582744.Msip34_0177 4.7e-155 554.3 Nitrosomonadales Bacteria 1MW7F@1224,2KMAH@206350,2VHR0@28216,COG2206@1,COG2206@2 NA|NA|NA T PFAM metal-dependent phosphohydrolase HD sub domain MAG.C3.5_00665 582744.Msip34_0176 5.2e-204 716.8 Nitrosomonadales metK GO:0000096,GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004478,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006556,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009069,GO:0009108,GO:0009116,GO:0009119,GO:0009987,GO:0016740,GO:0016765,GO:0017076,GO:0017144,GO:0019752,GO:0030554,GO:0030955,GO:0031420,GO:0032553,GO:0032555,GO:0032559,GO:0033353,GO:0034641,GO:0035639,GO:0036094,GO:0042278,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046872,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901576,GO:1901605,GO:1901657 2.5.1.6 ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 M00034,M00035,M00368,M00609 R00177,R04771 RC00021,RC01211 ko00000,ko00001,ko00002,ko01000 iJN746.PP_4967,iYL1228.KPN_03375 Bacteria 1MUFQ@1224,2KKEB@206350,2VH7U@28216,COG0192@1,COG0192@2 NA|NA|NA H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme MAG.C3.5_00666 1236959.BAMT01000006_gene374 1.9e-105 389.0 Nitrosomonadales htrB 2.3.1.241 ko:K02517 ko00540,ko01100,map00540,map01100 M00060 R05146 RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01005 Bacteria 1Q41N@1224,2KKVS@206350,2VKN0@28216,COG1560@1,COG1560@2 NA|NA|NA M lipid A biosynthesis acyltransferase MAG.C3.5_00668 666681.M301_0039 1.3e-122 446.0 Nitrosomonadales Bacteria 1MVAG@1224,2KNMV@206350,2VMU5@28216,COG1305@1,COG1305@2 NA|NA|NA E Transglutaminase/protease-like homologues MAG.C3.5_00669 666681.M301_0038 1.4e-131 475.7 Nitrosomonadales Bacteria 1MWAI@1224,2KNND@206350,2W251@28216,COG1305@1,COG1305@2 NA|NA|NA E Transglutaminase/protease-like homologues MAG.C3.5_00670 1112274.KI911560_gene61 4.9e-101 374.4 Nitrosomonadales Bacteria 1PNJV@1224,2KMPD@206350,2VI8H@28216,COG2358@1,COG2358@2 NA|NA|NA S NMT1-like family MAG.C3.5_00671 666681.M301_1579 7.6e-31 139.8 Nitrosomonadales ispF GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008270,GO:0008685,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016849,GO:0030145,GO:0042180,GO:0042181,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.1.1.228,2.7.7.60,4.6.1.12 ko:K00554,ko:K00991,ko:K01770,ko:K12506 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R00597,R05633,R05637 RC00002,RC00003,RC00334,RC01440 ko00000,ko00001,ko00002,ko01000,ko03016 iPC815.YPO3360 Bacteria 1MVHA@1224,2KMKB@206350,2VR7F@28216,COG0245@1,COG0245@2 NA|NA|NA I Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) MAG.C3.5_00672 582744.Msip34_1184 0.0 1625.1 Nitrosomonadales ko:K15726 ko00000,ko02000 2.A.6.1.2 Bacteria 1NUIV@1224,2KM5P@206350,2VKKR@28216,COG3696@1,COG3696@2 NA|NA|NA P Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family MAG.C3.5_00673 1387312.BAUS01000004_gene1624 1.2e-128 466.5 Nitrosomonadales ko:K15727 ko00000,ko02000 8.A.1.2.1 Bacteria 1MVAS@1224,2KKYQ@206350,2VI8Z@28216,COG0845@1,COG0845@2 NA|NA|NA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family MAG.C3.5_00674 582744.Msip34_1186 7e-133 480.7 Nitrosomonadales ko:K15725 ko00000,ko02000 1.B.17.2.2 Bacteria 1R744@1224,2KKZE@206350,2VJW4@28216,COG1538@1,COG1538@2 NA|NA|NA MU PFAM Outer membrane efflux protein MAG.C3.5_00675 265072.Mfla_1118 1.6e-75 288.9 Nitrosomonadales yfcN Bacteria 1RH34@1224,2KMB7@206350,2VQ2S@28216,COG2840@1,COG2840@2 NA|NA|NA S Small MutS-related domain MAG.C3.5_00676 1132855.KB913035_gene1147 3.8e-160 570.9 Nitrosomonadales trxB GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9,4.3.1.9 ko:K00384,ko:K03671,ko:K22345 ko00030,ko00450,ko04621,ko05418,map00030,map00450,map04621,map05418 R01544,R02016,R03596,R09372 RC00013,RC00544,RC02518,RC02873 ko00000,ko00001,ko01000,ko03110 iNJ661.Rv3913 Bacteria 1MV15@1224,2KMFY@206350,2VIVV@28216,COG0492@1,COG0492@2 NA|NA|NA C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family MAG.C3.5_00677 666681.M301_1572 2.1e-71 275.0 Nitrosomonadales dps ko:K04047 ko00000,ko03036 Bacteria 1RAC5@1224,2KMKR@206350,2VHJI@28216,COG0783@1,COG0783@2 NA|NA|NA P Belongs to the Dps family MAG.C3.5_00678 1163617.SCD_n02166 5.6e-74 284.3 Betaproteobacteria oxyR ko:K04761 ko02026,map02026 ko00000,ko00001,ko03000 Bacteria 1MVA1@1224,2VIBJ@28216,COG0583@1,COG0583@2 NA|NA|NA K Transcriptional regulator MAG.C3.5_00679 582744.Msip34_2246 1.3e-154 552.7 Nitrosomonadales cusB ko:K15727 ko00000,ko02000 8.A.1.2.1 Bacteria 1MVAS@1224,2KKX1@206350,2VN6Q@28216,COG0845@1,COG0845@2 NA|NA|NA M Biotin-lipoyl like MAG.C3.5_00680 1236959.BAMT01000005_gene185 1.8e-139 502.7 Nitrosomonadales cusC ko:K15725 ko00000,ko02000 1.B.17.2.2 Bacteria 1R6S1@1224,2KP5M@206350,2VMHP@28216,COG1538@1,COG1538@2 NA|NA|NA MU Outer membrane efflux protein MAG.C3.5_00682 582744.Msip34_2249 1.9e-216 758.4 Nitrosomonadales cysS GO:0000166,GO:0001871,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030246,GO:0030247,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2001065 6.1.1.16,6.3.1.13 ko:K01883,ko:K15526 ko00970,map00970 M00359,M00360 R03650 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iECUMN_1333.ECUMN_0566,iJN746.PP_2905 Bacteria 1MV8H@1224,2KM9D@206350,2VHN4@28216,COG0215@1,COG0215@2 NA|NA|NA J Belongs to the class-I aminoacyl-tRNA synthetase family MAG.C3.5_00683 1165096.ARWF01000001_gene2116 1.1e-65 257.3 Nitrosomonadales Bacteria 1Q84V@1224,2KKK5@206350,2VJAQ@28216,COG0457@1,COG0457@2 NA|NA|NA S Tetratricopeptide repeat MAG.C3.5_00684 582744.Msip34_2251 7.8e-150 537.0 Nitrosomonadales pgp2 Bacteria 1N2B6@1224,2KKJC@206350,2VJXB@28216,COG3034@1,COG3034@2 NA|NA|NA S PFAM ErfK YbiS YcfS YnhG family protein MAG.C3.5_00685 583345.Mmol_0508 5.3e-56 224.2 Nitrosomonadales 5.2.1.8 ko:K03767,ko:K03768 ko01503,ko04217,map01503,map04217 ko00000,ko00001,ko01000,ko03110,ko04147 Bacteria 1R9ZQ@1224,2KMU4@206350,2VQ3Z@28216,COG0652@1,COG0652@2 NA|NA|NA O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides MAG.C3.5_00686 582744.Msip34_2253 7.9e-77 293.1 Nitrosomonadales ppiB GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.7.11.1,5.2.1.8 ko:K03767,ko:K03768,ko:K08884 ko01503,ko04217,map01503,map04217 ko00000,ko00001,ko01000,ko01001,ko03110,ko04147 Bacteria 1R9ZQ@1224,2KMNN@206350,2VQ3Z@28216,COG0652@1,COG0652@2 NA|NA|NA O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides MAG.C3.5_00687 265072.Mfla_0495 9.1e-85 320.1 Nitrosomonadales lpxH GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0019897,GO:0019898,GO:0030145,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.54 ko:K03269 ko00540,ko01100,map00540,map01100 M00060 R04549 RC00002 ko00000,ko00001,ko00002,ko01000,ko01005 iE2348C_1286.E2348C_0457 Bacteria 1N3U7@1224,2KMGY@206350,2VQRP@28216,COG2908@1,COG2908@2 NA|NA|NA S Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell MAG.C3.5_00688 1101195.Meth11DRAFT_2040 4.5e-13 80.5 Nitrosomonadales nuoF 1.12.1.3 ko:K17992 ko00000,ko01000 Bacteria 1P6KD@1224,2KP3K@206350,2W59B@28216,COG3411@1,COG3411@2 NA|NA|NA C Ferredoxin MAG.C3.5_00690 666681.M301_0511 4.2e-231 807.4 Nitrosomonadales 3.1.4.17 ko:K01120 ko00230,map00230 R00191,R01234 RC00296 ko00000,ko00001,ko01000 Bacteria 1MV37@1224,2KNE7@206350,2VJ21@28216,COG2203@1,COG2203@2,COG2206@1,COG2206@2 NA|NA|NA T GAF domain MAG.C3.5_00691 666681.M301_0510 2.2e-70 272.3 Nitrosomonadales Bacteria 1MW1M@1224,2KN77@206350,2VJ1K@28216,COG1716@1,COG1716@2 NA|NA|NA T Forkhead associated domain MAG.C3.5_00692 666681.M301_0509 4.3e-99 367.9 Nitrosomonadales pppL 3.1.3.16 ko:K01090,ko:K20074 ko00000,ko01000,ko01009 Bacteria 1R7UF@1224,2KNQP@206350,2VM6F@28216,COG0631@1,COG0631@2 NA|NA|NA T PFAM Protein phosphatase MAG.C3.5_00693 580332.Slit_0530 0.0 1134.4 Betaproteobacteria 2.7.11.1 ko:K12132 ko00000,ko01000,ko01001 Bacteria 1MV1P@1224,2VKJ8@28216,COG0515@1,COG0515@2,COG4252@1,COG4252@2 NA|NA|NA KLT serine threonine protein kinase MAG.C3.5_00694 582744.Msip34_2256 1.9e-48 198.7 Nitrosomonadales nusB GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 ko:K03625 ko00000,ko03009,ko03021 Bacteria 1RHFZ@1224,2KMZN@206350,2VSI6@28216,COG0781@1,COG0781@2 NA|NA|NA K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons MAG.C3.5_00695 666681.M301_0507 1.2e-60 239.2 Nitrosomonadales ribH GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 ko:K00794 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R04457 RC00960 ko00000,ko00001,ko00002,ko01000 iLJ478.TM1825 Bacteria 1RD9J@1224,2KMQU@206350,2VQGE@28216,COG0054@1,COG0054@2 NA|NA|NA H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin MAG.C3.5_00696 265072.Mfla_0489 3.8e-117 427.6 Nitrosomonadales Bacteria 1MY2Z@1224,2KKPH@206350,2VIT4@28216,COG0745@1,COG0745@2 NA|NA|NA T TIGRFAM phosphate regulon transcriptional regulatory protein PhoB MAG.C3.5_00697 582744.Msip34_2260 2.5e-186 658.3 Nitrosomonadales phoR GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0004721,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016021,GO:0016036,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0016787,GO:0016788,GO:0016791,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0031224,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0035556,GO:0036211,GO:0042578,GO:0042594,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071496,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 ko:K02484,ko:K07636 ko02020,map02020 M00434 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1MWF3@1224,2KKZ5@206350,2VIBV@28216,COG5002@1,COG5002@2 NA|NA|NA T TIGRFAM phosphate regulon sensor kinase PhoR MAG.C3.5_00699 1132855.KB913035_gene667 9.4e-13 79.0 Nitrosomonadales ydhL ko:K06938 ko00000 Bacteria 1NGD5@1224,2KNDD@206350,2W822@28216,COG3313@1,COG3313@2 NA|NA|NA S Protein of unknown function (DUF1289) MAG.C3.5_00700 265072.Mfla_2234 0.0 1524.6 Nitrosomonadales secA GO:0000166,GO:0002790,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006457,GO:0006605,GO:0006810,GO:0006886,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015627,GO:0015628,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032991,GO:0033036,GO:0033220,GO:0034613,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042802,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061077,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:0098776,GO:1901265,GO:1901363,GO:1904680 ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4 Bacteria 1MUJZ@1224,2KKHN@206350,2VHDH@28216,COG0653@1,COG0653@2 NA|NA|NA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane MAG.C3.5_00701 582744.Msip34_0497 9.1e-100 370.2 Nitrosomonadales nlpD_1 3.4.24.75 ko:K08259,ko:K21472 ko00000,ko01000,ko01002,ko01011 Bacteria 1MVTF@1224,2KKDK@206350,2VKR8@28216,COG0739@1,COG0739@2 NA|NA|NA M Peptidase family M23 MAG.C3.5_00702 265072.Mfla_2236 1.2e-28 132.9 Nitrosomonadales Z012_02020 Bacteria 1NHRC@1224,2KP89@206350,2VWI9@28216,COG4701@1,COG4701@2 NA|NA|NA S Protein of unknown function (DUF721) MAG.C3.5_00703 1236959.BAMT01000002_gene2169 9.8e-72 276.9 Nitrosomonadales ko:K07090 ko00000 Bacteria 1R3V4@1224,2KMVZ@206350,2VKXN@28216,COG0730@1,COG0730@2 NA|NA|NA S membrane transporter protein MAG.C3.5_00704 582744.Msip34_0494 8.6e-99 366.7 Nitrosomonadales MA20_23390 ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1MUX3@1224,2KNEB@206350,2WHA3@28216,COG1131@1,COG1131@2 NA|NA|NA V ABC transporter MAG.C3.5_00705 582744.Msip34_0493 5.4e-115 420.6 Nitrosomonadales MA20_23385 ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1MUF4@1224,2KNNH@206350,2W3RW@28216,COG0842@1,COG0842@2 NA|NA|NA V ABC-2 type transporter MAG.C3.5_00706 1101195.Meth11DRAFT_2254 0.0 1124.4 Nitrosomonadales hppA 3.6.1.1 ko:K15987 ko00190,map00190 ko00000,ko00001,ko01000 3.A.10.1 Bacteria 1MUQ3@1224,2KNHQ@206350,2VI3K@28216,COG3808@1,COG3808@2 NA|NA|NA C Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force MAG.C3.5_00707 1101195.Meth11DRAFT_2255 8.8e-85 319.7 Nitrosomonadales ppa 3.6.1.1 ko:K01507 ko00190,map00190 ko00000,ko00001,ko01000 iJN746.PP_0538 Bacteria 1RA2F@1224,2KKIH@206350,2VQC0@28216,COG0221@1,COG0221@2 NA|NA|NA C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions MAG.C3.5_00708 582744.Msip34_0490 3.4e-80 304.7 Nitrosomonadales ybcF 4.2.1.1 ko:K01673 ko00910,map00910 R00132,R10092 RC02807 ko00000,ko00001,ko01000 Bacteria 1MZCY@1224,2KN8M@206350,2VV31@28216,COG0288@1,COG0288@2,COG3339@1,COG3339@2 NA|NA|NA P Protein of unknown function (DUF1232) MAG.C3.5_00709 582744.Msip34_0489 1.7e-141 508.8 Nitrosomonadales purC GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6,6.3.4.13 ko:K01923,ko:K01945,ko:K03566 ko00230,ko01100,ko01110,ko01130,ko02026,map00230,map01100,map01110,map01130,map02026 M00048 R04144,R04591 RC00064,RC00090,RC00162,RC00166 ko00000,ko00001,ko00002,ko01000,ko03000 Bacteria 1MUR9@1224,2KMDV@206350,2VGZK@28216,COG0152@1,COG0152@2 NA|NA|NA F PFAM SAICAR synthetase MAG.C3.5_00710 582744.Msip34_0488 5e-56 223.8 Nitrosomonadales VP0175 ko:K13256 ko00000 Bacteria 1N0MS@1224,2KN5Y@206350,2VUQQ@28216,COG3223@1,COG3223@2 NA|NA|NA S Belongs to the PsiE family MAG.C3.5_00711 666681.M301_2164 1.8e-147 528.9 Nitrosomonadales fba 4.1.2.13 ko:K01624 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00003,M00165,M00167,M00344,M00345 R01068,R01070,R01829,R02568 RC00438,RC00439,RC00603,RC00604 ko00000,ko00001,ko00002,ko01000 iJN746.PP_4960 Bacteria 1MURX@1224,2KMGX@206350,2VHGI@28216,COG0191@1,COG0191@2 NA|NA|NA G fructose-bisphosphate aldolase, class II, Calvin cycle subtype MAG.C3.5_00712 582744.Msip34_0486 3.7e-191 674.5 Nitrosomonadales pykA GO:0003674,GO:0003824,GO:0004743,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016043,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0022607,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0042802,GO:0042866,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0065003,GO:0071704,GO:0071840,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.1.40 ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 M00001,M00002,M00049,M00050 R00200,R00430,R01138,R01858,R02320 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 e_coli_core.b1854,iAF1260.b1854,iB21_1397.B21_01813,iBWG_1329.BWG_1668,iEC042_1314.EC042_2021,iECBD_1354.ECBD_1784,iECB_1328.ECB_01825,iECDH10B_1368.ECDH10B_1995,iECDH1ME8569_1439.ECDH1ME8569_1801,iECD_1391.ECD_01825,iECO103_1326.ECO103_2044,iECO111_1330.ECO111_2362,iECO26_1355.ECO26_2692,iECUMN_1333.ECUMN_2152,iETEC_1333.ETEC_1887,iEcDH1_1363.EcDH1_1786,iEcE24377_1341.EcE24377A_2084,iEcHS_1320.EcHS_A1947,iEcSMS35_1347.EcSMS35_1332,iEcolC_1368.EcolC_1778,iG2583_1286.G2583_2306,iJO1366.b1854,iJR904.b1854,iSBO_1134.SBO_1162,iSSON_1240.SSON_1294,iSbBS512_1146.SbBS512_E2130,iUMNK88_1353.UMNK88_2326,iY75_1357.Y75_RS09740 Bacteria 1MU21@1224,2KM48@206350,2VHN5@28216,COG0469@1,COG0469@2 NA|NA|NA G Belongs to the pyruvate kinase family MAG.C3.5_00713 582744.Msip34_0485 4.1e-188 664.1 Nitrosomonadales pgk GO:0003674,GO:0003824,GO:0004618,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.2.3,5.3.1.1 ko:K00927,ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01015,R01512 RC00002,RC00043,RC00423 ko00000,ko00001,ko00002,ko01000,ko04147 iSbBS512_1146.SbBS512_E3351 Bacteria 1MUNU@1224,2KKQP@206350,2VHJK@28216,COG0126@1,COG0126@2 NA|NA|NA G Belongs to the phosphoglycerate kinase family MAG.C3.5_00714 1236959.BAMT01000002_gene2157 7.1e-173 613.2 Nitrosomonadales gapA GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0036094,GO:0042866,GO:0043436,GO:0043891,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 1.2.1.12 ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01061 RC00149 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 iAPECO1_1312.APECO1_847,iPC815.YPO2157,iUTI89_1310.UTI89_C1975,ic_1306.c2184 Bacteria 1MU93@1224,2KMB2@206350,2VHHG@28216,COG0057@1,COG0057@2 NA|NA|NA G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family MAG.C3.5_00715 582744.Msip34_0483 0.0 1260.7 Nitrosomonadales tkt GO:0000302,GO:0003674,GO:0003824,GO:0004802,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006098,GO:0006139,GO:0006355,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009052,GO:0009117,GO:0009635,GO:0009636,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010033,GO:0010035,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016740,GO:0016744,GO:0019219,GO:0019222,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0019842,GO:0030145,GO:0030976,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0033554,GO:0034599,GO:0034614,GO:0034641,GO:0035690,GO:0036094,GO:0036245,GO:0042221,GO:0042493,GO:0042542,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0046496,GO:0046677,GO:0046872,GO:0046914,GO:0048037,GO:0048518,GO:0048522,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051156,GO:0051171,GO:0051173,GO:0051186,GO:0051252,GO:0051254,GO:0051716,GO:0055086,GO:0060255,GO:0065007,GO:0070301,GO:0070887,GO:0071236,GO:0071310,GO:0071417,GO:0071495,GO:0071704,GO:0072524,GO:0072747,GO:0072756,GO:0080090,GO:0097159,GO:0097237,GO:1901135,GO:1901322,GO:1901360,GO:1901363,GO:1901562,GO:1901564,GO:1901654,GO:1901655,GO:1901681,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 2.2.1.1 ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167 R01067,R01641,R01830,R06590 RC00032,RC00226,RC00571,RC01560 ko00000,ko00001,ko00002,ko01000 iECABU_c1320.ECABU_c27750,iLF82_1304.LF82_2271,iNRG857_1313.NRG857_12300,iSDY_1059.SDY_3141,iYL1228.KPN_01127,iYL1228.KPN_02799,ic_1306.c2990 Bacteria 1MUEY@1224,2KKF0@206350,2VHNX@28216,COG0021@1,COG0021@2 NA|NA|NA G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate MAG.C3.5_00716 582744.Msip34_0482 3.7e-89 335.1 Betaproteobacteria Bacteria 1R6GI@1224,2VM5N@28216,COG2199@1,COG3706@2 NA|NA|NA T Diguanylate cyclase MAG.C3.5_00717 1101195.Meth11DRAFT_2271 1.4e-77 295.8 Nitrosomonadales Bacteria 1R9YF@1224,2KMA9@206350,2VN9B@28216,COG1225@1,COG1225@2 NA|NA|NA O PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen MAG.C3.5_00718 1101195.Meth11DRAFT_2272 8.8e-80 303.5 Nitrosomonadales rsmE GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070042,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.193 ko:K09761 ko00000,ko01000,ko03009 Bacteria 1MXCU@1224,2KMH0@206350,2VJS2@28216,COG1385@1,COG1385@2 NA|NA|NA J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit MAG.C3.5_00720 1165096.ARWF01000001_gene401 1.4e-232 812.4 Nitrosomonadales kefB GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006885,GO:0008150,GO:0008324,GO:0009636,GO:0009987,GO:0010033,GO:0015075,GO:0015077,GO:0015079,GO:0015291,GO:0015318,GO:0015503,GO:0015643,GO:0015672,GO:0016020,GO:0016021,GO:0019899,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042592,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0048878,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051595,GO:0055067,GO:0055080,GO:0055085,GO:0065007,GO:0065008,GO:0071804,GO:0071805,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:1901654,GO:1901700 ko:K03455,ko:K11745,ko:K11747 ko00000,ko02000 2.A.37,2.A.37.1.1,2.A.37.1.2 iB21_1397.B21_03153,iEC55989_1330.EC55989_3754,iECBD_1354.ECBD_0398,iECB_1328.ECB_03201,iECD_1391.ECD_03201,iECO26_1355.ECO26_4439,iECOK1_1307.ECOK1_0046,iECS88_1305.ECS88_0050,iECSE_1348.ECSE_3612,iECW_1372.ECW_m3606,iEKO11_1354.EKO11_0394,iEcHS_1320.EcHS_A3547,iSFV_1184.SFV_3356,iSSON_1240.SSON_3481,iUMN146_1321.UM146_23015,iUTI89_1310.UTI89_C0053,iWFL_1372.ECW_m3606,iYL1228.KPN_03736 Bacteria 1MV34@1224,2KM44@206350,2VHQQ@28216,COG0475@1,COG0475@2,COG1226@1,COG1226@2 NA|NA|NA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family MAG.C3.5_00721 670292.JH26_17705 6e-29 134.0 Methylobacteriaceae srpB ko:K07507 ko00000,ko02000 9.B.20 Bacteria 1JWU5@119045,1MURJ@1224,2U5UM@28211,COG1285@1,COG1285@2 NA|NA|NA S MgtC family MAG.C3.5_00722 1485544.JQKP01000010_gene793 2.7e-154 553.1 Nitrosomonadales Bacteria 1MU2C@1224,2W8ZJ@28216,44WED@713636,COG5001@1,COG5001@2 NA|NA|NA T Putative diguanylate phosphodiesterase MAG.C3.5_00723 1165096.ARWF01000001_gene245 1.7e-238 832.0 Nitrosomonadales Bacteria 1MUQX@1224,2KMF9@206350,2VMVP@28216,COG4993@1,COG4993@2 NA|NA|NA G PQQ-like domain MAG.C3.5_00724 582744.Msip34_1308 4.8e-112 411.0 Betaproteobacteria ycgE ko:K21089,ko:K21972,ko:K22491 ko02026,map02026 ko00000,ko00001,ko03000 Bacteria 1R2NF@1224,2VJDG@28216,COG0789@1,COG0789@2,COG5012@1,COG5012@2 NA|NA|NA K PFAM regulatory protein, MerR MAG.C3.5_00725 666681.M301_1469 7.5e-149 533.5 Nitrosomonadales cfa 2.1.1.79 ko:K00574 ko00000,ko01000 Bacteria 1MUW5@1224,2KMFN@206350,2VI5F@28216,COG2230@1,COG2230@2 NA|NA|NA M Putative methyltransferase MAG.C3.5_00726 666681.M301_1470 2.4e-34 152.1 Nitrosomonadales Bacteria 1N8YD@1224,2CH72@1,2KN4M@206350,2VVUJ@28216,32ZK4@2 NA|NA|NA S Protein of unknown function (DUF2878) MAG.C3.5_00727 666681.M301_1471 2.3e-94 352.1 Nitrosomonadales yfhH 1.3.1.22 ko:K12343 ko00140,map00140 R02208,R02497,R08954,R10242 RC00145 ko00000,ko00001,ko01000 Bacteria 1MXCP@1224,2KKZM@206350,2VQHY@28216,COG3752@1,COG3752@2 NA|NA|NA S Phospholipid methyltransferase MAG.C3.5_00728 582744.Msip34_1304 1.9e-56 225.7 Nitrosomonadales Bacteria 1N3G5@1224,2KMRW@206350,2VUMZ@28216,COG4338@1,COG4338@2 NA|NA|NA S Protein conserved in bacteria MAG.C3.5_00729 1502770.JQMG01000001_gene1712 5.2e-56 224.2 Nitrosomonadales blc4 ko:K03098 ko00000,ko04147 Bacteria 1RIKA@1224,2KMTG@206350,2VTSY@28216,COG3040@1,COG3040@2 NA|NA|NA M Lipocalin-like domain MAG.C3.5_00730 1165096.ARWF01000001_gene237 2.9e-131 474.9 Nitrosomonadales desC 1.14.19.1 ko:K00507 ko01040,ko01212,ko03320,ko04152,ko04212,map01040,map01212,map03320,map04152,map04212 R02222 RC00917 ko00000,ko00001,ko01000,ko01004 Bacteria 1N2MA@1224,2KKMK@206350,2VMFC@28216,COG1398@1,COG1398@2 NA|NA|NA I Fatty acid desaturase MAG.C3.5_00731 582744.Msip34_1301 3e-197 694.5 Nitrosomonadales ko:K06954 ko00000 Bacteria 1MV4Z@1224,2KKWV@206350,2VHCR@28216,COG2907@1,COG2907@2 NA|NA|NA S Flavin containing amine oxidoreductase MAG.C3.5_00732 582744.Msip34_1300 7.5e-93 347.1 Nitrosomonadales 2.1.1.79 ko:K00574,ko:K09701 ko00000,ko01000 Bacteria 1RC56@1224,2KKWX@206350,2VIZ9@28216,COG3496@1,COG3496@2 NA|NA|NA S Protein of unknown function (DUF1365) MAG.C3.5_00733 582744.Msip34_1299 7.6e-180 636.7 Nitrosomonadales cfa 2.1.1.317,2.1.1.79 ko:K00574,ko:K20238 ko00000,ko01000 iJN746.PP_2734 Bacteria 1MX3U@1224,2KP5H@206350,2VJ00@28216,COG2230@1,COG2230@2 NA|NA|NA M Mycolic acid cyclopropane synthetase MAG.C3.5_00734 265072.Mfla_1394 6.6e-45 187.2 Nitrosomonadales 2.1.1.222,2.1.1.64 ko:K00568 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00117 R04988,R05614,R08769,R08781 RC00003,RC00392,RC01895 ko00000,ko00001,ko00002,ko01000 Bacteria 1RE7I@1224,2KPA4@206350,2VR4M@28216,COG2227@1,COG2227@2 NA|NA|NA H Tellurite resistance protein TehB MAG.C3.5_00735 402626.Rpic_4126 1.9e-80 306.2 Burkholderiaceae Bacteria 1K2D4@119060,1R7HC@1224,2VQ62@28216,COG2199@1,COG3706@2 NA|NA|NA T Diguanylate cyclase MAG.C3.5_00736 1101195.Meth11DRAFT_1312 2.6e-184 652.1 Nitrosomonadales mnmC GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0004808,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016491,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0071949,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363 2.1.1.61,2.1.1.72,2.4.2.29,4.2.1.151 ko:K00773,ko:K07319,ko:K11782,ko:K15461 ko00130,ko01110,map00130,map01110 R00601,R03789,R08702,R10209,R10666 RC00003,RC00053,RC00060,RC00063,RC01483,RC03232 ko00000,ko00001,ko01000,ko02048,ko03016 Bacteria 1MZW5@1224,2KMCW@206350,2VHGY@28216,COG0665@1,COG0665@2,COG4121@1,COG4121@2 NA|NA|NA E Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 MAG.C3.5_00737 582744.Msip34_1296 7.5e-169 600.9 Nitrosomonadales Bacteria 1MVMG@1224,2KKW3@206350,2VH3M@28216,COG0457@1,COG0457@2,COG3914@1,COG3914@2 NA|NA|NA O Glycosyl transferase family 41 MAG.C3.5_00738 1132855.KB913035_gene1365 5.5e-216 757.7 Proteobacteria 2.7.13.3 ko:K02484,ko:K14986 ko02020,map02020 M00524 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1NRP8@1224,COG0642@1,COG2203@1,COG2203@2,COG2205@2 NA|NA|NA T PhoQ Sensor MAG.C3.5_00739 583345.Mmol_1226 6.8e-42 176.8 Nitrosomonadales divK ko:K11443 ko02020,ko04112,map02020,map04112 M00511 ko00000,ko00001,ko00002,ko02022 Bacteria 1QU3I@1224,2KNXS@206350,2WGTG@28216,COG0784@1,COG0784@2 NA|NA|NA T cheY-homologous receiver domain MAG.C3.5_00740 1132855.KB913035_gene1363 4e-254 884.0 Betaproteobacteria Bacteria 1MU2C@1224,2VH3V@28216,COG5001@1,COG5001@2 NA|NA|NA T Diguanylate cyclase MAG.C3.5_00741 1112274.KI911560_gene2278 0.0 1142.5 Nitrosomonadales Bacteria 1R93T@1224,2KMDY@206350,2VPB4@28216,COG2199@1,COG2199@2,COG2200@1,COG2200@2 NA|NA|NA T Putative diguanylate phosphodiesterase MAG.C3.5_00742 582744.Msip34_1294 2.3e-169 601.7 Nitrosomonadales uptC ko:K02670 ko00000,ko02035,ko02044 3.A.15.2 Bacteria 1QTTX@1224,2KM6D@206350,2VHU7@28216,COG5008@1,COG5008@2 NA|NA|NA NU PFAM type II secretion system protein E MAG.C3.5_00743 1132855.KB913035_gene1901 2e-107 395.6 Nitrosomonadales Bacteria 1RBFV@1224,2KMAR@206350,2VQEZ@28216,COG0697@1,COG0697@2 NA|NA|NA EG EamA-like transporter family MAG.C3.5_00744 582744.Msip34_1291 1.6e-179 635.6 Nitrosomonadales dapC 2.6.1.11,2.6.1.17 ko:K00821,ko:K14267 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00028,M00845 R02283,R04475 RC00006,RC00062 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1MWS8@1224,2KKF4@206350,2VIEP@28216,COG0436@1,COG0436@2 NA|NA|NA E PFAM Aminotransferase class I and II MAG.C3.5_00745 1236959.BAMT01000008_gene2451 3.5e-97 360.9 Nitrosomonadales Bacteria 1MWYS@1224,2KKMJ@206350,2VNIQ@28216,COG1795@1,COG1795@2 NA|NA|NA S PFAM Formaldehyde-activating enzyme (Fae) MAG.C3.5_00746 1236959.BAMT01000008_gene2450 1.4e-37 162.5 Nitrosomonadales ko:K02348 ko00000 Bacteria 1MZ86@1224,2KN42@206350,2VMR6@28216,COG2153@1,COG2153@2 NA|NA|NA S Acetyltransferase (GNAT) domain MAG.C3.5_00748 1101195.Meth11DRAFT_2501 5.1e-31 140.6 Nitrosomonadales yqjF GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K15977 ko00000 Bacteria 1P2FD@1224,2KN7E@206350,2W4SE@28216,COG2259@1,COG2259@2 NA|NA|NA S DoxX MAG.C3.5_00749 265072.Mfla_2431 4.3e-148 530.8 Nitrosomonadales ispH GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0042380,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046490,GO:0048037,GO:0051536,GO:0051538,GO:0051540,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.4,2.7.4.25 ko:K00945,ko:K02945,ko:K03527 ko00240,ko00900,ko01100,ko01110,ko01130,ko03010,map00240,map00900,map01100,map01110,map01130,map03010 M00052,M00096,M00178 R00158,R00512,R01665,R05884,R08210 RC00002,RC01137,RC01487 br01610,ko00000,ko00001,ko00002,ko01000,ko03011 iECIAI1_1343.ECIAI1_0030,iECW_1372.ECW_m0028,iEKO11_1354.EKO11_3884,iEcHS_1320.EcHS_A0031,iEcolC_1368.EcolC_3626,iIT341.HP0400,iLJ478.TM1444,iPC815.YPO0477,iSFV_1184.SFV_0023,iSF_1195.SF0026,iSFxv_1172.SFxv_0027,iS_1188.S0028,iWFL_1372.ECW_m0028,iYL1228.KPN_00024 Bacteria 1MU7G@1224,2KM0H@206350,2VHM8@28216,COG0761@1,COG0761@2 NA|NA|NA IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis MAG.C3.5_00750 582744.Msip34_2603 3.3e-116 424.9 Nitrosomonadales cobD GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 6.3.1.10 ko:K02227 ko00860,ko01100,map00860,map01100 M00122 R06529,R07302 RC00090,RC00096 ko00000,ko00001,ko00002,ko01000 Bacteria 1MWCK@1224,2KNPK@206350,2VH7X@28216,COG1270@1,COG1270@2 NA|NA|NA H Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group MAG.C3.5_00751 1236959.BAMT01000008_gene2444 2.2e-46 192.2 Nitrosomonadales yhgE GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K13652 ko00000,ko03000 Bacteria 1N79X@1224,2KNU0@206350,2VWWR@28216,COG3449@1,COG3449@2 NA|NA|NA L Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell MAG.C3.5_00752 1236959.BAMT01000008_gene2443 2.3e-140 505.0 Nitrosomonadales purU GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006753,GO:0006760,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008864,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009256,GO:0009257,GO:0009259,GO:0009260,GO:0009396,GO:0009987,GO:0016053,GO:0016787,GO:0016810,GO:0016811,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0034641,GO:0034654,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.72,3.5.1.10 ko:K00974,ko:K01433 ko00630,ko00670,ko03013,map00630,map00670,map03013 R00944,R09382,R09383,R09384,R09386 RC00026,RC00078,RC00111 ko00000,ko00001,ko01000,ko03016 iSDY_1059.SDY_1284 Bacteria 1MVCF@1224,2KM5N@206350,2VIXE@28216,COG0788@1,COG0788@2 NA|NA|NA F Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) MAG.C3.5_00753 265072.Mfla_2443 4.6e-190 670.6 Nitrosomonadales lysA GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008836,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.1.129,3.4.16.4,4.1.1.20 ko:K01586,ko:K05366 ko00300,ko00550,ko01100,ko01110,ko01120,ko01130,ko01230,ko01501,map00300,map00550,map01100,map01110,map01120,map01130,map01230,map01501 M00016,M00525,M00526,M00527 R00451 RC00299 ko00000,ko00001,ko00002,ko01000,ko01003,ko01011 GT51 iLJ478.TM1517 Bacteria 1MUA6@1224,2KKUY@206350,2VI3M@28216,COG0019@1,COG0019@2 NA|NA|NA E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine MAG.C3.5_00754 1095769.CAHF01000006_gene1974 9e-37 159.8 Oxalobacteraceae ko:K02650,ko:K02655 ko02020,map02020 ko00000,ko00001,ko02035,ko02044 3.A.15.2 Bacteria 1MZZW@1224,2VU8H@28216,474VK@75682,COG4968@1,COG4968@2 NA|NA|NA NU Type IV minor pilin ComP, DNA uptake sequence receptor MAG.C3.5_00755 1095769.CAHF01000006_gene1975 1.2e-29 136.7 Oxalobacteraceae ko:K02456,ko:K08084 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15,3.A.15.2 Bacteria 1NA9B@1224,2VWAB@28216,4751F@75682,COG4970@1,COG4970@2 NA|NA|NA NU Prokaryotic N-terminal methylation motif MAG.C3.5_00756 1095769.CAHF01000006_gene1976 1.6e-24 119.4 Oxalobacteraceae pilV ko:K02671 ko00000,ko02035,ko02044 Bacteria 1N7AC@1224,2VW8B@28216,4755Z@75682,COG4967@1,COG4967@2 NA|NA|NA NU type IV pilus modification protein PilV MAG.C3.5_00757 1538295.JY96_13155 2.8e-74 285.8 Betaproteobacteria ko:K02672 ko00000,ko02035,ko02044 Bacteria 1RH2G@1224,2VT5C@28216,COG4966@1,COG4966@2 NA|NA|NA NU Type IV Pilus-assembly protein W MAG.C3.5_00758 1095769.CAHF01000006_gene1978 2e-37 162.5 Oxalobacteraceae ko:K02673 ko00000,ko02035,ko02044 Bacteria 1N9CE@1224,2VWPP@28216,47556@75682,COG4726@1,COG4726@2 NA|NA|NA NU Pilus assembly protein PilX MAG.C3.5_00759 1454004.AW11_01622 0.0 1104.4 Betaproteobacteria pilY1 ko:K02674 ko00000,ko02035,ko02044 Bacteria 1NUAV@1224,2VHY8@28216,COG2304@1,COG2304@2,COG3419@1,COG3419@2 NA|NA|NA NU pilus assembly protein tip-associated adhesin MAG.C3.5_00760 1502770.JQMG01000001_gene747 3.8e-56 224.6 Nitrosomonadales hepS 2.5.1.30 ko:K00805 ko00900,ko01110,map00900,map01110 R09247 RC00279 ko00000,ko00001,ko01000,ko01006 Bacteria 1RJIB@1224,2KNRZ@206350,2VRM1@28216,COG4769@1,COG4769@2 NA|NA|NA S Heptaprenyl diphosphate synthase component I MAG.C3.5_00761 1502770.JQMG01000001_gene746 3.2e-36 157.9 Nitrosomonadales Bacteria 1N1PN@1224,2KNV8@206350,2VUW8@28216,COG5341@1,COG5341@2 NA|NA|NA S NusG domain II MAG.C3.5_00762 1502770.JQMG01000001_gene745 6.5e-105 387.5 Nitrosomonadales rnfF 2.7.1.180 ko:K03734 ko00000,ko01000 Bacteria 1MW6K@1224,2KNMN@206350,2VPGP@28216,COG1477@1,COG1477@2 NA|NA|NA H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein MAG.C3.5_00763 1101195.Meth11DRAFT_2544 2e-124 452.2 Nitrosomonadales gshB GO:0000287,GO:0003674,GO:0003824,GO:0004363,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006575,GO:0006749,GO:0006750,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0019184,GO:0034641,GO:0042398,GO:0042601,GO:0042763,GO:0043043,GO:0043167,GO:0043169,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:1901564,GO:1901566,GO:1901576 6.3.2.2,6.3.2.3 ko:K01919,ko:K01920,ko:K05844 ko00270,ko00480,ko01100,map00270,map00480,map01100 M00118 R00497,R00894,R10993,R10994 RC00064,RC00090,RC00096,RC00141 ko00000,ko00001,ko00002,ko01000,ko03009 iECED1_1282.ECED1_3410,iECP_1309.ECP_2941 Bacteria 1MVUA@1224,2KM28@206350,2VIZ3@28216,COG0189@1,COG0189@2 NA|NA|NA HJ Belongs to the prokaryotic GSH synthase family MAG.C3.5_00764 582744.Msip34_2591 6.2e-214 750.0 Nitrosomonadales secD GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 6.3.2.2 ko:K01919,ko:K03072,ko:K12257 ko00270,ko00480,ko01100,ko02024,ko03060,ko03070,map00270,map00480,map01100,map02024,map03060,map03070 M00118,M00335 R00894,R10993 RC00064,RC00090 ko00000,ko00001,ko00002,ko01000,ko02044 2.A.6.4,3.A.5.2,3.A.5.7 Bacteria 1MVFS@1224,2KKJP@206350,2VHD9@28216,COG0342@1,COG0342@2 NA|NA|NA U PFAM Glutamate-cysteine ligase MAG.C3.5_00765 666681.M301_2642 9e-225 786.2 Nitrosomonadales amtB GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0008519,GO:0015075,GO:0015291,GO:0015292,GO:0015669,GO:0015670,GO:0015696,GO:0015893,GO:0016020,GO:0016021,GO:0019755,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072488,GO:0098655 ko:K03320 ko00000,ko02000 1.A.11 iEcE24377_1341.EcE24377A_0487 Bacteria 1NR9F@1224,2KKII@206350,2VJ8B@28216,COG0004@1,COG0004@2 NA|NA|NA P Ammonium Transporter MAG.C3.5_00766 1236959.BAMT01000002_gene2190 1.4e-55 222.2 Nitrosomonadales purK GO:0000166,GO:0003674,GO:0003824,GO:0004638,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016829,GO:0016830,GO:0016831,GO:0016874,GO:0016879,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034028,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.4.18 ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R07404 RC01927 ko00000,ko00001,ko00002,ko01000 iECUMN_1333.ECUMN_0562,iYL1228.KPN_00477 Bacteria 1MU70@1224,2KKHF@206350,2VI6V@28216,COG0026@1,COG0026@2 NA|NA|NA F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) MAG.C3.5_00767 582744.Msip34_0518 2.2e-25 121.3 Nitrosomonadales rpsT GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02968 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1MZ94@1224,2KN48@206350,2VTYY@28216,COG0268@1,COG0268@2 NA|NA|NA J Binds directly to 16S ribosomal RNA MAG.C3.5_00768 582744.Msip34_0519 2.9e-226 791.2 Nitrosomonadales murJ GO:0000270,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0006810,GO:0006869,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0010876,GO:0015647,GO:0015648,GO:0015835,GO:0015836,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0030203,GO:0031224,GO:0031226,GO:0033036,GO:0034203,GO:0034204,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0055085,GO:0061024,GO:0065007,GO:0065008,GO:0070589,GO:0071554,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0097035,GO:1901135,GO:1901137,GO:1901264,GO:1901505,GO:1901564,GO:1901566,GO:1901576 ko:K03980 ko00000,ko01011,ko02000 2.A.66.4 iECO103_1326.ECO103_1114 Bacteria 1MUH0@1224,2KKBE@206350,2VHTQ@28216,COG0728@1,COG0728@2 NA|NA|NA S Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane MAG.C3.5_00769 666681.M301_0538 2.4e-119 435.3 Nitrosomonadales ribF GO:0003674,GO:0003824,GO:0003919,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008531,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0044237,GO:0070566 2.7.1.26,2.7.7.2 ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R00161,R00549 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 iETEC_1333.ETEC_0025,iJN746.PP_0602 Bacteria 1MV9I@1224,2KMHC@206350,2VHIP@28216,COG0196@1,COG0196@2 NA|NA|NA H Belongs to the ribF family MAG.C3.5_00770 1502770.JQMG01000001_gene314 0.0 1657.1 Nitrosomonadales ileS GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 ko:K01870 ko00970,map00970 M00359,M00360 R03656 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iG2583_1286.G2583_0027,iPC815.YPO0475 Bacteria 1MVBQ@1224,2KKY2@206350,2VIEJ@28216,COG0060@1,COG0060@2 NA|NA|NA J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) MAG.C3.5_00771 582744.Msip34_0522 4.4e-61 240.7 Nitrosomonadales lspA 3.4.23.36 ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 Bacteria 1RGV9@1224,2KMS9@206350,2VSEP@28216,COG0597@1,COG0597@2 NA|NA|NA MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins MAG.C3.5_00772 1101195.Meth11DRAFT_0596 1.2e-104 386.0 Nitrosomonadales yuiH Bacteria 1MWZK@1224,2KKZK@206350,2VQA6@28216,COG2041@1,COG2041@2 NA|NA|NA S PFAM oxidoreductase molybdopterin binding MAG.C3.5_00773 582744.Msip34_0530 8.2e-10 68.6 Betaproteobacteria ybgT GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008152,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0019867,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0071944 1.10.3.14 ko:K00424 ko00190,ko02020,map00190,map02020 M00153 ko00000,ko00001,ko01000 3.D.4.3 Bacteria 1NGDQ@1224,2VYT0@28216,COG4890@1,COG4890@2 NA|NA|NA S membrane MAG.C3.5_00774 582744.Msip34_0531 8.9e-180 636.3 Nitrosomonadales cydB 1.10.3.14 ko:K00426 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00153 R11325 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.4.3 iYO844.BSU38750 Bacteria 1MURP@1224,2KMGQ@206350,2VHSQ@28216,COG1294@1,COG1294@2 NA|NA|NA C Cytochrome bd terminal oxidase subunit II MAG.C3.5_00775 582744.Msip34_0532 1.8e-183 648.7 Nitrosomonadales cydA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0016682,GO:0019646,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0070069,GO:0071944,GO:0097159,GO:1901363 1.10.3.14 ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00153 R11325 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.4.3 iPC815.YPO1117,iSBO_1134.SBO_2253,iSFxv_1172.SFxv_0621,iS_1188.S0577,iSbBS512_1146.SbBS512_E2337 Bacteria 1MV60@1224,2KMI4@206350,2VHFR@28216,COG1271@1,COG1271@2 NA|NA|NA C Cytochrome bd terminal oxidase subunit I MAG.C3.5_00776 582744.Msip34_2585 2.7e-111 408.7 Nitrosomonadales Bacteria 1MUZE@1224,2KMMS@206350,2VJ27@28216,COG1814@1,COG1814@2 NA|NA|NA S VIT family MAG.C3.5_00777 1132855.KB913035_gene283 8.8e-220 769.6 Nitrosomonadales comM GO:0003674,GO:0003824,GO:0004176,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0042623,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564 ko:K07391 ko00000 Bacteria 1MU4R@1224,2KM06@206350,2VHRV@28216,COG0606@1,COG0606@2 NA|NA|NA O Magnesium chelatase, subunit ChlI MAG.C3.5_00778 1101195.Meth11DRAFT_2595 3.5e-17 94.0 Nitrosomonadales yqiC GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K09806 ko00000 Bacteria 1N7AH@1224,2KN9G@206350,2VVR4@28216,COG2960@1,COG2960@2 NA|NA|NA S Membrane fusogenic activity MAG.C3.5_00779 1000565.METUNv1_00315 7.5e-91 340.5 Rhodocyclales Bacteria 1RGNG@1224,2C5U9@1,2KYRP@206389,2VS67@28216,30VS0@2 NA|NA|NA S Bacterial protein of unknown function (Gcw_chp) MAG.C3.5_00780 583345.Mmol_0525 1.8e-68 265.4 Nitrosomonadales purE GO:0003674,GO:0003824,GO:0004638,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0016853,GO:0016866,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034023,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 5.4.99.18 ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R07405 RC01947 ko00000,ko00001,ko00002,ko01000 iETEC_1333.ETEC_0575,iJN746.PP_5336,iPC815.YPO3076,iUTI89_1310.UTI89_C0551 Bacteria 1RCWJ@1224,2KMNK@206350,2VQ1I@28216,COG0041@1,COG0041@2 NA|NA|NA F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) MAG.C3.5_00781 582744.Msip34_0515 4.3e-171 607.4 Nitrosomonadales proB GO:0003674,GO:0003824,GO:0004349,GO:0004350,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016491,GO:0016620,GO:0016740,GO:0016772,GO:0016774,GO:0016903,GO:0018130,GO:0019202,GO:0019752,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 M00015 R00239 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_3198 Bacteria 1MUBG@1224,2KKSK@206350,2VISR@28216,COG0263@1,COG0263@2 NA|NA|NA E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate MAG.C3.5_00782 582744.Msip34_0514 4.4e-170 604.0 Nitrosomonadales obg GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0007059,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0022607,GO:0022611,GO:0022613,GO:0022618,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034622,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0043021,GO:0043023,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044087,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0065003,GO:0065007,GO:0070925,GO:0071826,GO:0071840,GO:0090069,GO:0090071,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K03979 ko00000,ko01000,ko03009 Bacteria 1MUGZ@1224,2KKUT@206350,2VIM2@28216,COG0536@1,COG0536@2 NA|NA|NA S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control MAG.C3.5_00783 582744.Msip34_0513 7.1e-37 159.5 Nitrosomonadales rpmA GO:0000027,GO:0001558,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0040008,GO:0042254,GO:0042255,GO:0042256,GO:0042273,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048518,GO:0050789,GO:0050794,GO:0051128,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904 ko:K02899 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1MZGH@1224,2KN2Y@206350,2VU4W@28216,COG0211@1,COG0211@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL27 family MAG.C3.5_00784 582744.Msip34_0512 9.6e-44 182.6 Nitrosomonadales rplU GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02888 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1MZEW@1224,2KMZW@206350,2VSHZ@28216,COG0261@1,COG0261@2 NA|NA|NA J This protein binds to 23S rRNA in the presence of protein L20 MAG.C3.5_00785 582744.Msip34_0511 1.1e-138 499.6 Nitrosomonadales ispB GO:0003674,GO:0003824,GO:0004659,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009108,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0042180,GO:0042181,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901615,GO:1901617,GO:1901661,GO:1901663 2.5.1.30,2.5.1.90 ko:K00805,ko:K02523 ko00900,ko01110,map00900,map01110 R09247,R09248 RC00279 ko00000,ko00001,ko01000,ko01006 iYL1228.KPN_03597,ic_1306.c3945 Bacteria 1MUK6@1224,2KKIW@206350,2VHX4@28216,COG0142@1,COG0142@2 NA|NA|NA H Belongs to the FPP GGPP synthase family MAG.C3.5_00786 228410.NE0286 1.8e-38 165.6 Nitrosomonadales Bacteria 1N27R@1224,2C3ZQ@1,2WA3K@28216,32SCF@2,373PU@32003 NA|NA|NA S MEKHLA domain MAG.C3.5_00787 582744.Msip34_1063 0.0 1204.5 Nitrosomonadales rep GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022402,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044786,GO:0044787,GO:0046483,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 ko:K03656,ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 1MU0G@1224,2KM7U@206350,2VJFM@28216,COG0210@1,COG0210@2 NA|NA|NA L it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction MAG.C3.5_00788 583345.Mmol_1237 3.6e-282 977.2 Nitrosomonadales uup GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010528,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0031323,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0070894,GO:0071944,GO:0080090,GO:0097159,GO:1901363 ko:K15738 ko00000,ko02000 3.A.1.120.6 Bacteria 1MU37@1224,2KKC3@206350,2VH4J@28216,COG0488@1,COG0488@2 NA|NA|NA S PFAM ABC transporter MAG.C3.5_00789 583345.Mmol_1091 1.3e-104 386.3 Nitrosomonadales Bacteria 1MWFY@1224,28JGK@1,2KKEE@206350,2VQFN@28216,2Z9AA@2 NA|NA|NA S Protein of unknown function (DUF3034) MAG.C3.5_00790 582744.Msip34_2306 2.6e-39 168.3 Nitrosomonadales glbN ko:K06886 ko00000 Bacteria 1N005@1224,2KN4Y@206350,2VUPJ@28216,COG2346@1,COG2346@2 NA|NA|NA S Bacterial-like globin MAG.C3.5_00791 582744.Msip34_2307 7.7e-61 240.4 Nitrosomonadales Bacteria 1RHQU@1224,2KMUS@206350,2VSJJ@28216,COG3794@1,COG3794@2 NA|NA|NA C PFAM blue (type 1) copper domain protein MAG.C3.5_00792 666681.M301_0804 1.5e-237 829.3 Nitrosomonadales yclK GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005488,GO:0005515,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009966,GO:0009968,GO:0009987,GO:0010646,GO:0010648,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023051,GO:0023052,GO:0023057,GO:0035556,GO:0036211,GO:0042802,GO:0042803,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046983,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070297,GO:0070298,GO:0071704,GO:0140096,GO:1901564,GO:1902531,GO:1902532 2.7.13.3 ko:K02484,ko:K07653,ko:K07654,ko:K11617 ko02020,map02020 M00460,M00461,M00481,M00754 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1MU2C@1224,2KKX2@206350,2VHPI@28216,COG2972@1,COG2972@2,COG5001@1,COG5001@2 NA|NA|NA T histidine kinase HAMP region domain protein MAG.C3.5_00793 56107.Cylst_0426 7.3e-34 152.9 Nostocales Bacteria 1GQ7S@1117,1HRXM@1161,COG0823@1,COG0823@2,COG5276@1,COG5276@2 NA|NA|NA Q LVIVD repeat MAG.C3.5_00794 582744.Msip34_0862 7.7e-58 233.8 Nitrosomonadales 3.4.24.40 ko:K01406 ko01503,map01503 ko00000,ko00001,ko01000,ko01002 Bacteria 1PGC5@1224,2KNZF@206350,2W9Y6@28216,COG2931@1,COG2931@2 NA|NA|NA Q Haemolysin-type calcium-binding repeat (2 copies) MAG.C3.5_00796 1165096.ARWF01000001_gene6 6.4e-56 223.8 Nitrosomonadales bcp 1.11.1.15 ko:K03564 ko00000,ko01000 Bacteria 1RH4P@1224,2KMST@206350,2VT1P@28216,COG1225@1,COG1225@2 NA|NA|NA O PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen MAG.C3.5_00797 748247.AZKH_4524 2.7e-26 127.1 Rhodocyclales avxIA Bacteria 1MU7T@1224,2KZTM@206389,2VNQ5@28216,COG2931@1,COG2931@2 NA|NA|NA Q Haemolysin-type calcium-binding repeat (2 copies) MAG.C3.5_00799 582744.Msip34_1015 1.5e-200 706.1 Nitrosomonadales aggA ko:K12543 M00330 ko00000,ko00002,ko02000,ko02044 1.B.17,3.A.1.109.4 Bacteria 1MYX2@1224,2KM5M@206350,2VKDN@28216,COG1538@1,COG1538@2,COG4319@1,COG4319@2 NA|NA|NA MU TIGRFAM type I secretion outer membrane protein, TolC family MAG.C3.5_00800 582744.Msip34_1014 8.1e-75 287.0 Nitrosomonadales Bacteria 1RDQS@1224,2KMPG@206350,2VR6A@28216,COG3672@1,COG3672@2 NA|NA|NA S Bacterial transglutaminase-like cysteine proteinase BTLCP MAG.C3.5_00801 582744.Msip34_1013 2.9e-175 622.1 Nitrosomonadales lapD Bacteria 1MUQV@1224,2KKV1@206350,2VJ24@28216,COG2199@1,COG2199@2,COG2200@1,COG2200@2 NA|NA|NA T histidine kinase HAMP region domain protein MAG.C3.5_00802 666681.M301_0635 1.5e-21 109.0 Nitrosomonadales Bacteria 1N79W@1224,2E4XG@1,2KN90@206350,2VX4E@28216,32ZRD@2 NA|NA|NA S tryptophan synthase subunit beta MAG.C3.5_00803 1122599.AUGR01000032_gene35 3.9e-122 446.0 Oceanospirillales Bacteria 1MU7T@1224,1RMZW@1236,1XMTQ@135619,COG2304@1,COG2304@2,COG2931@1,COG2931@2 NA|NA|NA Q von willebrand factor, type A MAG.C3.5_00804 582744.Msip34_2751 7.8e-303 1046.6 Nitrosomonadales Bacteria 1MUME@1224,2KMEF@206350,2VIKY@28216,COG2911@1,COG2911@2,COG2982@1,COG2982@2 NA|NA|NA M Domain of Unknown Function (DUF748) MAG.C3.5_00806 582744.Msip34_2806 6.1e-237 826.6 Nitrosomonadales priA GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006276,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0010332,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042221,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0046677,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1MUUZ@1224,2KKNP@206350,2VINT@28216,COG1198@1,COG1198@2 NA|NA|NA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA MAG.C3.5_00807 582744.Msip34_2617 5e-147 526.9 Nitrosomonadales thiC GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 ko:K03147 ko00730,ko01100,map00730,map01100 M00127 R03472 RC03251,RC03252 ko00000,ko00001,ko00002,ko01000 iECABU_c1320.ECABU_c45100 Bacteria 1MUVV@1224,2KKSI@206350,2VHS3@28216,COG0422@1,COG0422@2 NA|NA|NA H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction MAG.C3.5_00808 265072.Mfla_2529 1.6e-136 492.7 Nitrosomonadales rluF 3.6.4.13,5.4.99.21 ko:K03578,ko:K06182 ko00000,ko01000,ko03009 Bacteria 1MXQE@1224,2KMFQ@206350,2VI7P@28216,COG1187@1,COG1187@2,COG3170@1,COG3170@2 NA|NA|NA J Belongs to the pseudouridine synthase RsuA family MAG.C3.5_00809 666681.M301_2745 1.2e-87 329.7 Nitrosomonadales uppP 3.6.1.27 ko:K06153 ko00550,map00550 R05627 RC00002 ko00000,ko00001,ko01000,ko01011 Bacteria 1MX02@1224,2KM3M@206350,2VHSA@28216,COG1968@1,COG1968@2 NA|NA|NA V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin MAG.C3.5_00810 582744.Msip34_2613 7.3e-75 287.0 Nitrosomonadales exoD Bacteria 1REE4@1224,2KNKU@206350,2VXYC@28216,COG3932@1,COG3932@2 NA|NA|NA S Exopolysaccharide synthesis, ExoD MAG.C3.5_00811 582744.Msip34_2612 6.1e-309 1066.6 Nitrosomonadales asmA ko:K07289,ko:K07290 ko00000 9.B.121 Bacteria 1NVUY@1224,2KMI1@206350,2VI5J@28216,COG2982@1,COG2982@2 NA|NA|NA M PFAM AsmA family MAG.C3.5_00812 1123400.KB904753_gene1067 6.3e-38 163.7 Proteobacteria ko:K08978,ko:K12962 ko01503,map01503 M00721 ko00000,ko00001,ko00002,ko01005,ko02000 2.A.7.2,2.A.7.22 Bacteria 1RIRZ@1224,COG2510@1,COG2510@2 NA|NA|NA S EamA-like transporter family MAG.C3.5_00813 666681.M301_2748 3.7e-145 521.2 Nitrosomonadales mutY GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 ko:K03575 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1MUD4@1224,2KKYG@206350,2VH21@28216,COG1194@1,COG1194@2 NA|NA|NA L TIGRFAM A G-specific adenine glycosylase MAG.C3.5_00814 1173028.ANKO01000216_gene6188 8.1e-25 123.6 Oscillatoriales 3.2.1.8 ko:K01181,ko:K20276 ko02024,map02024 ko00000,ko00001,ko01000 Bacteria 1G0ZC@1117,1H8KD@1150,COG0689@1,COG0689@2,COG2931@1,COG2931@2,COG5184@1,COG5184@2 NA|NA|NA Q PFAM Hemolysin-type calcium-binding repeat (2 copies) MAG.C3.5_00815 292415.Tbd_1586 4.5e-138 498.0 Hydrogenophilales ko:K06990,ko:K09141 ko00000,ko04812 Bacteria 1KS3P@119069,1MXK5@1224,2VKXP@28216,COG1355@1,COG1355@2,COG2078@1,COG2078@2 NA|NA|NA S Memo-like protein MAG.C3.5_00816 1123368.AUIS01000008_gene2237 6.2e-152 543.9 Acidithiobacillales pflA 1.97.1.4 ko:K04069 R04710 ko00000,ko01000 Bacteria 1NQC1@1224,1T90P@1236,2NDQR@225057,COG1180@1,COG1180@2 NA|NA|NA C Radical SAM superfamily MAG.C3.5_00817 582744.Msip34_0445 4.3e-46 190.3 Nitrosomonadales gcs2 Bacteria 1MUAD@1224,2KM45@206350,2VI55@28216,COG2308@1,COG2308@2 NA|NA|NA S Circularly permuted ATP-grasp type 2 MAG.C3.5_00818 265072.Mfla_0392 5.9e-129 467.2 Nitrosomonadales MA20_32425 Bacteria 1MVZK@1224,2KKR6@206350,2VIB5@28216,COG2307@1,COG2307@2 NA|NA|NA S A predicted alpha-helical domain with a conserved ER motif. MAG.C3.5_00819 582744.Msip34_0447 6.7e-89 334.0 Nitrosomonadales MA20_32430 Bacteria 1MVMI@1224,2KKMX@206350,2VH3S@28216,COG1305@1,COG1305@2 NA|NA|NA E Transglutaminase/protease-like homologues MAG.C3.5_00820 1122236.KB905143_gene220 9.5e-204 716.1 Nitrosomonadales 5.1.99.1 ko:K05606,ko:K17315 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,ko02010,map00280,map00630,map00640,map00720,map01100,map01120,map01200,map02010 M00373,M00375,M00376,M00605,M00741 R02765,R09979 RC00780,RC02739 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.1.24,3.A.1.1.30 Bacteria 1R5AJ@1224,2KKMU@206350,2W11Y@28216,COG3185@1,COG3185@2 NA|NA|NA E 4-Hydroxyphenylpyruvate dioxygenase MAG.C3.5_00823 316067.Geob_3119 4.9e-26 124.4 Deltaproteobacteria ko:K09924 ko00000 Bacteria 1N7UG@1224,2WSZB@28221,42XKS@68525,COG3184@1,COG3184@2 NA|NA|NA S Uncharacterized protein conserved in bacteria (DUF2059) MAG.C3.5_00824 582744.Msip34_0227 1.1e-87 330.1 Nitrosomonadales eamA1 Bacteria 1MYHQ@1224,2KM25@206350,2WFCK@28216,COG0697@1,COG0697@2 NA|NA|NA EG EamA-like transporter family MAG.C3.5_00825 582744.Msip34_0449 0.0 1088.2 Nitrosomonadales ydcP ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 Bacteria 1MUQG@1224,2KKFW@206350,2VHHU@28216,COG0826@1,COG0826@2 NA|NA|NA O Collagenase MAG.C3.5_00826 1122236.KB905142_gene429 3.1e-157 561.6 Nitrosomonadales ko:K06076 ko00000,ko02000 1.B.9 Bacteria 1MV7W@1224,2KM6M@206350,2VKVT@28216,COG2067@1,COG2067@2 NA|NA|NA I PFAM membrane protein involved in aromatic hydrocarbon degradation MAG.C3.5_00827 1132855.KB913035_gene2406 6.5e-139 501.1 Nitrosomonadales 2.7.7.65 ko:K18967 ko00000,ko01000,ko02000 9.B.34.1.1 Bacteria 1P29Y@1224,2KKHM@206350,2W170@28216,COG2199@1,COG2199@2 NA|NA|NA T Diverse 7TM receptor transmembrane region MAG.C3.5_00828 491952.Mar181_2464 3e-70 272.3 Oceanospirillales yvaC Bacteria 1QW9U@1224,1T41N@1236,1XNNN@135619,COG1289@1,COG1289@2 NA|NA|NA S Fusaric acid resistance protein-like MAG.C3.5_00829 640081.Dsui_1001 3.9e-86 325.5 Betaproteobacteria Bacteria 1Q18B@1224,2CEP7@1,2W6A4@28216,2ZEAF@2 NA|NA|NA MAG.C3.5_00830 640081.Dsui_1000 1.9e-114 419.5 Bacteria Bacteria COG1721@1,COG1721@2 NA|NA|NA E protein (some members contain a von Willebrand factor type A (vWA) domain MAG.C3.5_00831 640081.Dsui_0999 3.3e-124 451.4 Rhodocyclales ko:K03924 ko00000,ko01000 Bacteria 1MUFN@1224,2KW6R@206389,2VKJJ@28216,COG0714@1,COG0714@2 NA|NA|NA S ATPase family associated with various cellular activities (AAA) MAG.C3.5_00832 1165096.ARWF01000001_gene1159 1.7e-130 472.6 Nitrosomonadales pldA 3.1.1.32,3.1.1.4 ko:K01058 ko00564,ko00565,ko00590,ko00591,ko00592,ko01100,ko01110,map00564,map00565,map00590,map00591,map00592,map01100,map01110 R01315,R01316,R01317,R02053,R02054,R04034,R07064,R07379,R07387,R07859,R07860 RC00020,RC00037,RC00041,RC00094 ko00000,ko00001,ko01000 Bacteria 1PC8I@1224,2KNB2@206350,2VMT8@28216,COG2829@1,COG2829@2 NA|NA|NA M Phospholipase A1 MAG.C3.5_00833 582744.Msip34_2304 1.7e-156 558.9 Nitrosomonadales tas 1.1.1.91 ko:K05882 ko00000,ko01000 Bacteria 1MV2Y@1224,2KMA6@206350,2VI7D@28216,COG0667@1,COG0667@2 NA|NA|NA C PFAM aldo keto reductase MAG.C3.5_00834 582744.Msip34_1507 9.6e-300 1035.4 Nitrosomonadales fhcA 1.2.7.12 ko:K00200 ko00680,ko01100,ko01120,ko01130,ko01200,map00680,map01100,map01120,map01130,map01200 M00567 R03015,R08060 RC00197,RC00323 ko00000,ko00001,ko00002,ko01000 Bacteria 1NX13@1224,2KKSB@206350,2VK99@28216,COG1229@1,COG1229@2 NA|NA|NA C Formylmethanofuran dehydrogenase, subunit A MAG.C3.5_00835 582744.Msip34_1506 5.4e-173 614.0 Nitrosomonadales fhcB GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0044237,GO:0044281 1.2.7.12 ko:K00201 ko00680,ko01100,ko01120,ko01200,map00680,map01100,map01120,map01200 M00567 R03015,R08060 RC00197,RC00323 ko00000,ko00001,ko00002,ko01000 Bacteria 1R64R@1224,2KM62@206350,2VIB0@28216,COG1029@1,COG1029@2 NA|NA|NA C formylmethanofuran dehydrogenase MAG.C3.5_00836 1165096.ARWF01000001_gene144 8.4e-108 396.7 Nitrosomonadales ydiA GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0030234,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0065007,GO:0065009,GO:0098772 2.7.11.33,2.7.4.28 ko:K09773 ko00000,ko01000 Bacteria 1MUHU@1224,2KP6I@206350,2W0KQ@28216,COG1806@1,COG1806@2 NA|NA|NA S Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation MAG.C3.5_00837 1236959.BAMT01000002_gene2202 0.0 1312.0 Nitrosomonadales ppsA GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008986,GO:0009058,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016781,GO:0019318,GO:0019319,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046872,GO:0071704,GO:1901576 2.7.9.2 ko:K01007 ko00620,ko00680,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00720,map01100,map01120,map01200 M00173,M00374 R00199 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000 iEcE24377_1341.EcE24377A_1919,iYL1228.KPN_02160 Bacteria 1MU0R@1224,2KKSP@206350,2VHQ3@28216,COG0574@1,COG0574@2,COG1080@1,COG1080@2 NA|NA|NA G Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate MAG.C3.5_00838 582744.Msip34_1505 2.3e-107 395.6 Nitrosomonadales mptG 2.4.2.54 ko:K06984 ko00790,map00790 R10337,R11102 ko00000,ko00001,ko01000 Bacteria 1MWHM@1224,2KKRY@206350,2VMEM@28216,COG1907@1,COG1907@2 NA|NA|NA S TIGRFAM beta-ribofuranosylaminobenzene 5'-phosphate synthase family MAG.C3.5_00839 1236959.BAMT01000001_gene1478 6.4e-125 453.8 Nitrosomonadales hemA GO:0005575,GO:0005623,GO:0009288,GO:0042597,GO:0042995,GO:0043226,GO:0043228,GO:0044464,GO:0055040 1.2.1.70 ko:K02407,ko:K02492,ko:K10714,ko:K15671 ko00680,ko00860,ko01051,ko01052,ko01100,ko01110,ko01120,ko01200,ko02040,map00680,map00860,map01051,map01052,map01100,map01110,map01120,map01200,map02040 M00121 R04109,R08059 RC00055,RC00149,RC00202 ko00000,ko00001,ko00002,ko01000,ko01008,ko02035 iSB619.SA_RS08420 Bacteria 1MXX5@1224,2KM5G@206350,2VK09@28216,COG0373@1,COG0373@2 NA|NA|NA H Methylene-tetrahydromethanopterin dehydrogenase, N-terminal MAG.C3.5_00840 1165096.ARWF01000001_gene148 8.3e-68 264.2 Nitrosomonadales 3.5.4.27 ko:K01499,ko:K06913 ko00680,ko01100,ko01120,ko01200,map00680,map01100,map01120,map01200 M00567 R03464 RC01870 ko00000,ko00001,ko00002,ko01000 Bacteria 1R6Y7@1224,2KMYB@206350,2VQI8@28216,COG2232@1,COG2232@2 NA|NA|NA S ATP-grasp domain MAG.C3.5_00841 265072.Mfla_1658 7e-157 560.1 Nitrosomonadales mch GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009987,GO:0015947,GO:0016787,GO:0016810,GO:0016814,GO:0018759,GO:0019238,GO:0043446,GO:0044237,GO:0044424,GO:0044464,GO:0071704 3.5.4.27 ko:K01499 ko00680,ko01100,ko01120,ko01200,map00680,map01100,map01120,map01200 M00567 R03464 RC01870 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUP6@1224,2KMGH@206350,2VMCD@28216,COG3252@1,COG3252@2 NA|NA|NA H Catalyzes the hydrolysis of methenyl-H(4)MPT( ) to 5- formyl-H(4)MPT MAG.C3.5_00842 582744.Msip34_1501 1.8e-119 435.6 Nitrosomonadales rimK 6.3.1.17,6.3.2.32,6.3.2.41,6.3.2.43 ko:K05827,ko:K05844,ko:K14940,ko:K18310 ko00250,ko00300,ko00680,ko01100,ko01120,ko01210,ko01230,map00250,map00300,map00680,map01100,map01120,map01210,map01230 M00031 R09401,R09775,R10677,R10678 RC00064,RC00090,RC00141,RC03233 ko00000,ko00001,ko00002,ko01000,ko03009 Bacteria 1MX62@1224,2KKPT@206350,2VJZS@28216,COG0189@1,COG0189@2 NA|NA|NA HJ Belongs to the RimK family MAG.C3.5_00843 1236959.BAMT01000001_gene1483 1.3e-79 303.1 Nitrosomonadales citG 2.4.2.52,2.7.7.61 ko:K05964,ko:K05966,ko:K13927,ko:K13930 ko02020,map02020 R09675,R10706 RC00049,RC00063 ko00000,ko00001,ko01000 Bacteria 1RAWI@1224,2KKD8@206350,2VQ7E@28216,COG1767@1,COG1767@2 NA|NA|NA H PFAM triphosphoribosyl-dephospho-CoA protein MAG.C3.5_00844 582744.Msip34_1499 2.7e-166 591.3 Nitrosomonadales tal GO:0003674,GO:0003824,GO:0004801,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009117,GO:0009987,GO:0016740,GO:0016744,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564 2.2.1.2 ko:K00616 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007 R01827 RC00439,RC00604 ko00000,ko00001,ko00002,ko01000 iYL1228.KPN_02798 Bacteria 1MWQ8@1224,2KKIE@206350,2VHIN@28216,COG0176@1,COG0176@2 NA|NA|NA G Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway MAG.C3.5_00845 1502770.JQMG01000001_gene1123 3e-97 361.3 Nitrosomonadales rmpA 4.1.2.43,5.3.1.27 ko:K08093,ko:K13831 ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230 M00345,M00580 R05338,R05339,R09780 RC00377,RC00421,RC00422 ko00000,ko00001,ko00002,ko01000 Bacteria 1R970@1224,2KKJK@206350,2VWTN@28216,COG0269@1,COG0269@2 NA|NA|NA G PFAM Orotidine 5'-phosphate decarboxylase MAG.C3.5_00846 582744.Msip34_1497 1.4e-82 312.4 Nitrosomonadales hxlB 4.1.2.14,4.1.2.43,4.1.3.42,5.3.1.27 ko:K01625,ko:K08094,ko:K13831 ko00030,ko00630,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00630,map00680,map01100,map01120,map01200,map01230 M00008,M00061,M00308,M00345,M00580,M00631 R00470,R05338,R05339,R05605,R09780 RC00307,RC00308,RC00377,RC00421,RC00422,RC00435 ko00000,ko00001,ko00002,ko01000 Bacteria 1RFKB@1224,2KMEB@206350,2W25Z@28216,COG0794@1,COG0794@2 NA|NA|NA M PFAM sugar isomerase (SIS) MAG.C3.5_00847 1101195.Meth11DRAFT_1505 3.1e-82 311.2 Nitrosomonadales fae 4.2.1.147 ko:K10713 ko00680,ko01120,ko01200,map00680,map01120,map01200 R08058 RC01583,RC01795 ko00000,ko00001,ko01000 Bacteria 1NDRY@1224,2KM2Y@206350,2VJ22@28216,COG1795@1,COG1795@2 NA|NA|NA S PFAM Formaldehyde-activating enzyme (Fae) MAG.C3.5_00848 1236959.BAMT01000001_gene1489 4.3e-52 211.5 Nitrosomonadales 5.3.1.16 ko:K01814 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04640 RC00945 ko00000,ko00001,ko00002,ko01000 Bacteria 1RHWE@1224,2KMS0@206350,2VTJW@28216,COG1411@1,COG1411@2 NA|NA|NA S Belongs to the HisA HisF family MAG.C3.5_00849 265072.Mfla_1650 6.3e-56 224.6 Nitrosomonadales 6.3.4.24 ko:K06914 ko00680,map00680 R10902 RC00090,RC00096 ko00000,ko00001,ko01000 Bacteria 1RBY6@1224,2KMTW@206350,2VQ4F@28216,COG1821@1,COG1821@2 NA|NA|NA S ATP-grasp domain MAG.C3.5_00850 582744.Msip34_1492 1.1e-94 353.6 Nitrosomonadales 2.5.1.131 ko:K07072 ko00680,map00680 R11040 RC01372,RC03335 ko00000,ko00001,ko01000 Bacteria 1RAMA@1224,2KKXS@206350,2VKAE@28216,COG1548@1,COG1548@2 NA|NA|NA GK H4MPT-linked C1 transfer pathway protein MAG.C3.5_00851 582744.Msip34_1491 1.4e-174 619.4 Nitrosomonadales pabB GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.6.1.85 ko:K01665,ko:K13950 ko00790,map00790 R01716 RC00010,RC01418 ko00000,ko00001,ko01000 iEC042_1314.EC042_1977 Bacteria 1MVBJ@1224,2KM89@206350,2VP8B@28216,COG0147@1,COG0147@2 NA|NA|NA EH Anthranilate synthase component I MAG.C3.5_00852 582744.Msip34_1490 2.7e-66 258.5 Nitrosomonadales 1.13.11.81,2.7.4.31,4.1.2.25,5.1.99.8 ko:K01633,ko:K07144 ko00680,ko00790,ko01100,map00680,map00790,map01100 M00126,M00840 R03504,R11037,R11039,R11073 RC00002,RC00721,RC00943,RC01479,RC03333,RC03334 ko00000,ko00001,ko00002,ko01000 Bacteria 1MZY4@1224,2KMVY@206350,2VRWS@28216,COG2054@1,COG2054@2 NA|NA|NA S PFAM aspartate glutamate uridylate kinase MAG.C3.5_00853 582744.Msip34_1489 3.7e-53 214.2 Nitrosomonadales phhB 3.5.4.33,4.2.1.96 ko:K01724,ko:K11991 ko00790,map00790 R04734,R10223 RC00477,RC01208 ko00000,ko00001,ko01000,ko03016,ko04147 Bacteria 1RIEN@1224,2KMW0@206350,2VRX8@28216,COG2154@1,COG2154@2 NA|NA|NA H PFAM transcriptional coactivator pterin dehydratase MAG.C3.5_00854 582744.Msip34_1487 0.0 1584.3 Nitrosomonadales cecA_2 ko:K11326 ko02020,map02020 ko00000,ko00001,ko02000 2.A.6.1 Bacteria 1NUIV@1224,2KKBT@206350,2VHCZ@28216,COG3696@1,COG3696@2 NA|NA|NA P Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family MAG.C3.5_00855 1132855.KB913035_gene1244 2.1e-98 365.9 Nitrosomonadales Bacteria 1R6JG@1224,2KKVF@206350,2VUA5@28216,COG0845@1,COG0845@2 NA|NA|NA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family MAG.C3.5_00856 582744.Msip34_1485 9.1e-115 420.6 Nitrosomonadales ko:K19123 ko00000,ko02048 Bacteria 1RFMJ@1224,2KMD4@206350,2W2GG@28216,COG1538@1,COG1538@2 NA|NA|NA MU PFAM Outer membrane efflux protein MAG.C3.5_00857 1132855.KB913035_gene1246 3e-24 117.5 Nitrosomonadales Bacteria 1NCD5@1224,2CHG9@1,2KN9Q@206350,2VWRB@28216,3332K@2 NA|NA|NA MAG.C3.5_00859 582744.Msip34_1462 8.3e-182 643.3 Nitrosomonadales tig GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006464,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0042802,GO:0043021,GO:0043022,GO:0043170,GO:0043335,GO:0043412,GO:0044183,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0050896,GO:0051083,GO:0061077,GO:0071704,GO:0140096,GO:1901564 ko:K03545 ko00000 Bacteria 1MUJP@1224,2KKU1@206350,2VING@28216,COG0544@1,COG0544@2 NA|NA|NA O Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase MAG.C3.5_00860 582744.Msip34_1461 3.6e-106 391.0 Nitrosomonadales clpP 3.4.21.92 ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Bacteria 1MV46@1224,2KM99@206350,2VHAZ@28216,COG0740@1,COG0740@2 NA|NA|NA OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins MAG.C3.5_00861 1236959.BAMT01000001_gene1525 1.6e-217 761.9 Nitrosomonadales clpX GO:0000166,GO:0000502,GO:0002020,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009376,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019899,GO:0019904,GO:0030163,GO:0030164,GO:0030312,GO:0030554,GO:0031333,GO:0031597,GO:0032271,GO:0032272,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043254,GO:0043335,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051301,GO:0051704,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0097718,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 Bacteria 1MVQK@1224,2KKDJ@206350,2VIEU@28216,COG1219@1,COG1219@2 NA|NA|NA O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP MAG.C3.5_00862 1236959.BAMT01000001_gene1526 0.0 1374.0 Nitrosomonadales lon GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004175,GO:0004176,GO:0004252,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006515,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009056,GO:0009057,GO:0009266,GO:0009314,GO:0009408,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017171,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051603,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 3.4.21.53 ko:K01338 ko04112,map04112 ko00000,ko00001,ko01000,ko01002 Bacteria 1MUV2@1224,2KMG1@206350,2VIAU@28216,COG0466@1,COG0466@2 NA|NA|NA O ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner MAG.C3.5_00863 582744.Msip34_1458 5.8e-37 159.8 Nitrosomonadales hupB ko:K03530 ko00000,ko03032,ko03036,ko03400 Bacteria 1MZ5B@1224,2KN3N@206350,2VU4V@28216,COG0776@1,COG0776@2 NA|NA|NA L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions MAG.C3.5_00866 1101195.Meth11DRAFT_0937 3.9e-104 384.4 Nitrosomonadales hom GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 1.1.1.3 ko:K00003 ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230 M00017,M00018 R01773,R01775 RC00087 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv1294,iSB619.SA_RS06610 Bacteria 1MUDC@1224,2KMC7@206350,2VH9T@28216,COG0460@1,COG0460@2 NA|NA|NA E amino acid-binding ACT domain protein MAG.C3.5_00867 1502770.JQMG01000001_gene2356 1e-233 815.8 Nitrosomonadales thrC 4.2.3.1 ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 M00018 R01466,R05086 RC00017,RC00526 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUWQ@1224,2KMEQ@206350,2VHR6@28216,COG0498@1,COG0498@2 NA|NA|NA E TIGRFAM threonine synthase MAG.C3.5_00868 1236959.BAMT01000001_gene1208 2.8e-140 504.6 Nitrosomonadales thyA GO:0003674,GO:0003824,GO:0004799,GO:0006139,GO:0006220,GO:0006221,GO:0006231,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009125,GO:0009129,GO:0009130,GO:0009131,GO:0009157,GO:0009159,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009178,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0032259,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042083,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046073,GO:0046078,GO:0046079,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 2.1.1.45 ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 M00053 R02101 RC00219,RC00332 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUBD@1224,2KM56@206350,2VIIR@28216,COG0207@1,COG0207@2 NA|NA|NA F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis MAG.C3.5_00869 1236959.BAMT01000003_gene491 4.1e-73 283.1 Nitrosomonadales Bacteria 1MU7T@1224,2KP8N@206350,2WF3H@28216,COG2931@1,COG2931@2 NA|NA|NA Q Haemolysin-type calcium-binding repeat (2 copies) MAG.C3.5_00870 583345.Mmol_1276 2.4e-71 275.0 Nitrosomonadales ykoJ Bacteria 1N2PN@1224,2KMS2@206350,2VVWQ@28216,COG3212@1,COG3212@2 NA|NA|NA S Peptidase propeptide and YPEB domain MAG.C3.5_00871 640081.Dsui_2362 5.8e-28 131.0 Betaproteobacteria pcp ko:K06077 ko00000 Bacteria 1N18D@1224,2VU4M@28216,COG3133@1,COG3133@2 NA|NA|NA M PFAM 17 kDa surface antigen MAG.C3.5_00873 582744.Msip34_0881 7.8e-30 137.1 Bacteria osmY GO:0005575,GO:0005623,GO:0006457,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0009628,GO:0009987,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0050896,GO:0061077 ko:K04065 ko00000 Bacteria COG2823@1,COG2823@2 NA|NA|NA S hyperosmotic response MAG.C3.5_00874 582744.Msip34_0882 9.6e-205 719.5 Nitrosomonadales yfhA ko:K07715 ko02020,ko02024,map02020,map02024 M00502 ko00000,ko00001,ko00002,ko02022 Bacteria 1MU0N@1224,2KM7W@206350,2VHSB@28216,COG2204@1,COG2204@2 NA|NA|NA T Sigma-54 interaction domain MAG.C3.5_00875 582744.Msip34_0883 2.5e-26 125.6 Nitrosomonadales Bacteria 1PJJ3@1224,2BUKV@1,2KN8I@206350,2W80V@28216,32PXE@2 NA|NA|NA MAG.C3.5_00876 582744.Msip34_0884 2.7e-162 578.6 Nitrosomonadales Bacteria 1N58A@1224,2KKG4@206350,2VHVP@28216,COG0642@1,COG2205@2 NA|NA|NA T His Kinase A (phospho-acceptor) domain MAG.C3.5_00877 666681.M301_1108 3.4e-64 251.1 Nitrosomonadales folA 1.5.1.3 ko:K00287,ko:K18589 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 M00126,M00840 R00936,R00937,R00939,R00940,R02235,R02236,R11765 RC00109,RC00110,RC00158 br01600,ko00000,ko00001,ko00002,ko01000,ko01504 Bacteria 1RH0P@1224,2KMR3@206350,2VSH8@28216,COG0262@1,COG0262@2 NA|NA|NA H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis MAG.C3.5_00878 582744.Msip34_0887 0.0 1449.5 Nitrosomonadales adiA 4.1.1.19 ko:K01584,ko:K01585 ko00330,ko01100,map00330,map01100 M00133 R00566 RC00299 ko00000,ko00001,ko00002,ko01000 Bacteria 1MWK4@1224,2KKF1@206350,2VIJQ@28216,COG1982@1,COG1982@2 NA|NA|NA E PFAM Orn Lys Arg decarboxylase major region MAG.C3.5_00879 1132855.KB913035_gene1099 5.6e-100 370.2 Nitrosomonadales dcd GO:0003674,GO:0003824,GO:0006139,GO:0006220,GO:0006244,GO:0006253,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008829,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009166,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009223,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046065,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.5.4.13 ko:K01494 ko00240,ko01100,map00240,map01100 M00053 R00568,R02325 RC00074 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV2J@1224,2KMDH@206350,2VIJ0@28216,COG0717@1,COG0717@2 NA|NA|NA F Belongs to the dCTP deaminase family MAG.C3.5_00880 582744.Msip34_1093 4.1e-195 687.2 Nitrosomonadales zwf 1.1.1.363,1.1.1.49 ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 M00004,M00006,M00008 R00835,R02736,R10907 RC00001,RC00066 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1MUN0@1224,2KM88@206350,2VHS1@28216,COG0364@1,COG0364@2 NA|NA|NA G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone MAG.C3.5_00885 643562.Daes_1990 2.4e-86 325.5 Desulfovibrionales Bacteria 1Q3GM@1224,2MA7I@213115,2WP46@28221,42SZ6@68525,COG1028@1,COG1028@2 NA|NA|NA IQ PFAM Short-chain dehydrogenase reductase SDR MAG.C3.5_00886 324925.Ppha_0534 2.4e-66 258.8 Bacteria ptmB GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016740,GO:0016772,GO:0016779,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.7.43,2.7.7.82 ko:K00983,ko:K18431 ko00520,ko01100,map00520,map01100 R01117,R04215,R10182 RC00152 ko00000,ko00001,ko01000 Bacteria COG1083@1,COG1083@2 NA|NA|NA M cytidylyl-transferase MAG.C3.5_00887 324925.Ppha_0533 1e-70 273.9 Bacteria ptmF 2.7.7.82 ko:K18431 ko00520,map00520 R10182 RC00152 ko00000,ko00001,ko01000 Bacteria COG0673@1,COG0673@2 NA|NA|NA S inositol 2-dehydrogenase activity MAG.C3.5_00888 1200792.AKYF01000027_gene386 4.7e-80 304.3 Bacilli ubiE2 Bacteria 1UP4M@1239,4HWTZ@91061,COG0500@1,COG2226@2 NA|NA|NA Q ubiE/COQ5 methyltransferase family MAG.C3.5_00889 243365.CV_4029 1.2e-50 207.2 Betaproteobacteria Bacteria 1RG1R@1224,2WH73@28216,COG2348@1,COG2348@2 NA|NA|NA V Acetyltransferase (GNAT) domain MAG.C3.5_00890 243365.CV_4030 2.5e-120 438.7 Betaproteobacteria ptmE Bacteria 1MUYJ@1224,2VNAZ@28216,COG0517@1,COG0517@2,COG1208@1,COG1208@2 NA|NA|NA JM PFAM Nucleotidyl transferase MAG.C3.5_00891 243365.CV_4031 4.5e-120 438.0 Neisseriales neuB GO:0003674,GO:0003824,GO:0005975,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016740,GO:0016765,GO:0044238,GO:0071704,GO:1901576 2.5.1.101,2.5.1.56 ko:K01654,ko:K18430 ko00520,ko01100,map00520,map01100 R01804,R04435,R10304 RC00159 ko00000,ko00001,ko01000 Bacteria 1MWG3@1224,2KQ5D@206351,2VHMH@28216,COG2089@1,COG2089@2 NA|NA|NA M SAF MAG.C3.5_00892 243365.CV_4032 9.8e-51 207.6 Betaproteobacteria Bacteria 1R5SK@1224,2VYXY@28216,COG0399@1,COG0399@2 NA|NA|NA M UDP-4-amino-4-deoxy-L-arabinose aminotransferase MAG.C3.5_00893 309807.SRU_0602 3.2e-116 425.2 Bacteroidetes neuC GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016787,GO:0016798,GO:0044238,GO:0071704,GO:1901576 3.2.1.184,5.1.3.14 ko:K01791,ko:K18429 ko00520,ko01100,ko05111,map00520,map01100,map05111 M00362 R00420,R10187 RC00005,RC00288,RC00290 ko00000,ko00001,ko00002,ko01000,ko01005 Bacteria 4NFTG@976,COG0381@1,COG0381@2 NA|NA|NA M UDP-N-acetylglucosamine 2-epimerase MAG.C3.5_00894 1120973.AQXL01000124_gene2380 2e-155 555.4 Bacilli 2.6.1.102 ko:K13010 ko00520,map00520 R10460 RC00006,RC00781 ko00000,ko00001,ko01000,ko01005,ko01007 Bacteria 1TPDH@1239,4HBZ8@91061,COG0399@1,COG0399@2 NA|NA|NA E Belongs to the DegT DnrJ EryC1 family MAG.C3.5_00895 1316936.K678_09418 3.4e-159 567.8 Rhodospirillales 4.2.1.46,5.1.3.2 ko:K01710,ko:K01784 ko00052,ko00520,ko00521,ko00523,ko00525,ko01055,ko01100,ko01130,map00052,map00520,map00521,map00523,map00525,map01055,map01100,map01130 M00361,M00362,M00632,M00793 R00291,R02984,R06513 RC00289,RC00402 ko00000,ko00001,ko00002,ko01000 Bacteria 1QUEV@1224,2JZ25@204441,2TW46@28211,COG0451@1,COG0451@2 NA|NA|NA M NmrA-like family MAG.C3.5_00896 331678.Cphamn1_0373 1.9e-165 589.3 Chlorobi ko:K02022,ko:K06147,ko:K06148 ko00000,ko02000 3.A.1,3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 1FDNB@1090,COG1132@1,COG1132@2 NA|NA|NA V PFAM ABC transporter transmembrane region MAG.C3.5_00897 1286106.MPL1_01583 2.9e-39 167.9 Thiotrichales ko:K18996 ko00000,ko03032 Bacteria 1N0TY@1224,1SADN@1236,463BK@72273,COG1846@1,COG1846@2 NA|NA|NA K Transcriptional regulator MAG.C3.5_00898 265072.Mfla_1266 5.9e-133 480.7 Nitrosomonadales splB Bacteria 1MW0H@1224,2KMEW@206350,2VIYE@28216,COG1533@1,COG1533@2 NA|NA|NA L Elongator protein 3, MiaB family, Radical SAM MAG.C3.5_00899 265072.Mfla_1265 2.2e-45 188.3 Nitrosomonadales hslR GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003727,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009451,GO:0009628,GO:0009987,GO:0016070,GO:0033554,GO:0034605,GO:0034641,GO:0043021,GO:0043023,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 ko:K04762 ko00000,ko03110 Bacteria 1MZR6@1224,2KMTC@206350,2VTY8@28216,COG1188@1,COG1188@2 NA|NA|NA J PFAM RNA-binding S4 domain protein MAG.C3.5_00900 582744.Msip34_1729 6.2e-182 644.0 Nitrosomonadales lon1 3.4.21.53 ko:K01338 ko04112,map04112 ko00000,ko00001,ko01000,ko01002 Bacteria 1MWGB@1224,2KKIX@206350,2VJ54@28216,COG1067@1,COG1067@2 NA|NA|NA O Belongs to the peptidase S16 family MAG.C3.5_00901 265072.Mfla_2008 2.8e-50 204.5 Nitrosomonadales rfbB GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008460,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016829,GO:0016835,GO:0016836,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0045226,GO:0046379,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 4.2.1.46 ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 M00793 R06513 RC00402 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU5E@1224,2KM8Y@206350,2VJAD@28216,COG1088@1,COG1088@2 NA|NA|NA M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily MAG.C3.5_00902 1165096.ARWF01000001_gene187 4.5e-139 500.7 Nitrosomonadales rfbA GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005976,GO:0005996,GO:0006006,GO:0006139,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008879,GO:0009058,GO:0009059,GO:0009117,GO:0009141,GO:0009147,GO:0009200,GO:0009211,GO:0009219,GO:0009225,GO:0009226,GO:0009262,GO:0009394,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019299,GO:0019300,GO:0019305,GO:0019318,GO:0019319,GO:0019438,GO:0019637,GO:0019692,GO:0030312,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045226,GO:0046075,GO:0046364,GO:0046379,GO:0046383,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.7.7.24 ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 M00793 R02328 RC00002 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv0334,iSDY_1059.SDY_2206,iSF_1195.SF2102,iSFxv_1172.SFxv_2338,iS_1188.S2225 Bacteria 1MU0X@1224,2KM7G@206350,2VHA6@28216,COG1209@1,COG1209@2 NA|NA|NA M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis MAG.C3.5_00903 1005048.CFU_0808 2.8e-75 288.1 Oxalobacteraceae rfbC 5.1.3.13 ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R06514 RC01531 ko00000,ko00001,ko00002,ko01000 Bacteria 1R9YD@1224,2VQ02@28216,472YX@75682,COG1898@1,COG1898@2 NA|NA|NA G Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose MAG.C3.5_00904 1165096.ARWF01000001_gene189 4.7e-99 367.9 Nitrosomonadales rfbD 1.1.1.133 ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R02777 RC00182 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUXM@1224,2KKK4@206350,2VI50@28216,COG1091@1,COG1091@2 NA|NA|NA M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose MAG.C3.5_00905 582744.Msip34_1443 2.4e-69 268.1 Nitrosomonadales queD 4.1.2.50,4.2.3.12 ko:K01737 ko00790,ko01100,map00790,map01100 M00842,M00843 R04286,R09959 RC01117,RC02846,RC02847 ko00000,ko00001,ko00002,ko01000,ko03016 Bacteria 1RETG@1224,2KMK9@206350,2VRBN@28216,COG0720@1,COG0720@2 NA|NA|NA H PFAM 6-pyruvoyl tetrahydropterin synthase MAG.C3.5_00906 582744.Msip34_1441 5.8e-115 420.6 Nitrosomonadales rsgA GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0022613,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0036094,GO:0042254,GO:0042274,GO:0043167,GO:0043168,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363 3.1.3.100 ko:K06949 ko00730,ko01100,map00730,map01100 R00615,R02135 RC00002,RC00017 ko00000,ko00001,ko01000,ko03009 iAF1260.b4161,iBWG_1329.BWG_3876,iECDH10B_1368.ECDH10B_4356,iECDH1ME8569_1439.ECDH1ME8569_4021,iEKO11_1354.EKO11_4148,iEcDH1_1363.EcDH1_3829,iEcolC_1368.EcolC_3849,iJO1366.b4161,iUMNK88_1353.UMNK88_5099,iY75_1357.Y75_RS21675 Bacteria 1MUEF@1224,2KM0D@206350,2VINY@28216,COG1162@1,COG1162@2 NA|NA|NA S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit MAG.C3.5_00907 582744.Msip34_1440 6.8e-34 149.8 Nitrosomonadales Bacteria 1N71Z@1224,2KN7Q@206350,2VWE5@28216,COG2010@1,COG2010@2 NA|NA|NA C Cytochrome c MAG.C3.5_00908 582744.Msip34_1439 1.6e-133 482.3 Nitrosomonadales htpX_2 3.4.24.84 ko:K06013 ko00900,ko01130,map00900,map01130 R09845 RC00141 ko00000,ko00001,ko01000,ko01002,ko04147 Bacteria 1MUXT@1224,2KM5K@206350,2VI1Y@28216,COG0501@1,COG0501@2 NA|NA|NA O CAAX prenyl protease N-terminal, five membrane helices MAG.C3.5_00909 582744.Msip34_2625 3.2e-186 658.3 Nitrosomonadales Bacteria 1NRP8@1224,2KPAV@206350,2WHYT@28216,COG0642@1,COG2205@2 NA|NA|NA T His Kinase A (phosphoacceptor) domain MAG.C3.5_00910 582744.Msip34_2624 2.3e-115 422.2 Nitrosomonadales ko:K09476 ko01501,ko02020,map01501,map02020 M00746 ko00000,ko00001,ko00002,ko01504,ko02000 1.B.1.1.1 Bacteria 1R12R@1224,2KPAU@206350,2WHYS@28216,COG3203@1,COG3203@2 NA|NA|NA M Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane MAG.C3.5_00911 666681.M301_1909 2.6e-41 174.9 Nitrosomonadales Bacteria 1N3EC@1224,2KN1P@206350,2VXDA@28216,COG0226@1,COG0226@2 NA|NA|NA P Part of the ABC transporter complex PstSACB involved in phosphate import MAG.C3.5_00912 582744.Msip34_2622 1.5e-51 209.5 Nitrosomonadales Bacteria 1N2I4@1224,2CJ6B@1,2KMP7@206350,2VV7N@28216,32S9B@2 NA|NA|NA S Thermostable hemolysin MAG.C3.5_00913 666681.M301_1907 3.4e-150 538.5 Nitrosomonadales Bacteria 1MU4D@1224,2KM14@206350,2VN53@28216,COG1022@1,COG1022@2 NA|NA|NA I PFAM AMP-dependent synthetase and ligase MAG.C3.5_00914 582744.Msip34_2620 5.3e-92 344.0 Betaproteobacteria 2.7.1.49,2.7.4.7 ko:K00941 ko00730,ko01100,map00730,map01100 M00127 R03471,R04509 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVA0@1224,2WGSW@28216,COG0819@1,COG0819@2 NA|NA|NA K Iron-containing redox enzyme MAG.C3.5_00915 582744.Msip34_2619 8.4e-84 317.0 Nitrosomonadales Bacteria 1RAFB@1224,2KMGC@206350,2VS3H@28216,COG0300@1,COG0300@2 NA|NA|NA S Belongs to the short-chain dehydrogenases reductases (SDR) family MAG.C3.5_00916 666681.M301_1904 2.8e-82 311.6 Nitrosomonadales ko:K02656 ko00000,ko02035,ko02044 Bacteria 1RD9T@1224,2KMNU@206350,2VQ2E@28216,COG3063@1,COG3063@2 NA|NA|NA NU Tetratricopeptide repeat MAG.C3.5_00919 582744.Msip34_0721 1.5e-144 518.8 Nitrosomonadales pheS GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 ko:K01889 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iJN746.PP_2469,iSSON_1240.SSON_1444,iYL1228.KPN_02176 Bacteria 1MVD7@1224,2KM6N@206350,2VIM9@28216,COG0016@1,COG0016@2 NA|NA|NA J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily MAG.C3.5_00921 582744.Msip34_1806 1.1e-64 252.7 Nitrosomonadales 1.11.1.15,2.7.13.3 ko:K03564,ko:K07638 ko02020,ko02026,map02020,map02026 M00445,M00742,M00743 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1RD4R@1224,2KNT0@206350,2VRCR@28216,COG1225@1,COG1225@2 NA|NA|NA O Redoxin MAG.C3.5_00922 1236959.BAMT01000001_gene1110 4.4e-139 501.1 Nitrosomonadales ycfD GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0016491,GO:0016705,GO:0016706,GO:0018193,GO:0018195,GO:0019538,GO:0030961,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046872,GO:0046914,GO:0051213,GO:0055114,GO:0071704,GO:1901564 1.14.11.47 ko:K18850 ko00000,ko01000,ko03009 Bacteria 1MW30@1224,2KKDU@206350,2VH3D@28216,COG2850@1,COG2850@2 NA|NA|NA S SMART transcription factor jumonji jmjC domain protein MAG.C3.5_00923 1165096.ARWF01000001_gene2096 1.3e-39 169.5 Nitrosomonadales Bacteria 1N8MS@1224,2E3EJ@1,2KN6C@206350,2VW4J@28216,32YDJ@2 NA|NA|NA MAG.C3.5_00925 1122236.KB905141_gene1718 1.2e-98 366.3 Nitrosomonadales yycJ Bacteria 1R5N4@1224,2KKWM@206350,2VKSE@28216,COG1235@1,COG1235@2 NA|NA|NA S Beta-lactamase superfamily domain MAG.C3.5_00926 582744.Msip34_1800 1e-144 520.0 Nitrosomonadales bamC GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0009986,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0042802,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045229,GO:0061024,GO:0071709,GO:0071840,GO:0071944,GO:0098552,GO:0098796,GO:1990063 ko:K07287 ko00000,ko02000 1.B.33.1 Bacteria 1N670@1224,2KM3U@206350,2VHS5@28216,COG3317@1,COG3317@2 NA|NA|NA M NlpB/DapX lipoprotein MAG.C3.5_00927 582744.Msip34_1799 1.2e-131 476.1 Nitrosomonadales dapA GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008840,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019752,GO:0019877,GO:0042802,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.3.7 ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R10147 RC03062,RC03063 ko00000,ko00001,ko00002,ko01000 iECP_1309.ECP_2492,iYL1228.KPN_02812 Bacteria 1MUCM@1224,2KM15@206350,2VIQ4@28216,COG0329@1,COG0329@2 NA|NA|NA E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) MAG.C3.5_00928 1485544.JQKP01000001_gene1057 4.4e-74 284.3 Nitrosomonadales rnfA GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0044464,GO:0055114,GO:0071944 ko:K03617 ko00000 Bacteria 1MU8X@1224,2VH0C@28216,44VIU@713636,COG4657@1,COG4657@2 NA|NA|NA C Part of a membrane complex involved in electron transport MAG.C3.5_00929 1502770.JQMG01000001_gene405 8.8e-80 303.1 Nitrosomonadales rnfB GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0055114 1.12.98.1 ko:K00441,ko:K03616 ko00680,ko01100,ko01120,map00680,map01100,map01120 R03025 RC02628 ko00000,ko00001,ko01000 Bacteria 1MUWU@1224,2KMT4@206350,2VN5I@28216,COG2878@1,COG2878@2 NA|NA|NA C Part of a membrane complex involved in electron transport MAG.C3.5_00930 666681.M301_2375 6.7e-184 650.6 Nitrosomonadales rnfC GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0055114 ko:K03466,ko:K03615,ko:K03616,ko:K03821 ko00650,map00650 R04254 RC00004 ko00000,ko00001,ko01000,ko03036 3.A.12 Bacteria 1PJVF@1224,2KNEK@206350,2VM4P@28216,COG3064@1,COG3064@2,COG4656@1,COG4656@2 NA|NA|NA CM Part of a membrane complex involved in electron transport MAG.C3.5_00931 666681.M301_2376 6.6e-142 510.4 Nitrosomonadales rnfD GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0044464,GO:0055114,GO:0071944 1.6.5.8 ko:K00347,ko:K03614 ko00000,ko01000 Bacteria 1MVY6@1224,2KNQE@206350,2VJZJ@28216,COG4658@1,COG4658@2 NA|NA|NA C Part of a membrane complex involved in electron transport MAG.C3.5_00932 666681.M301_2377 7.2e-62 243.8 Nitrosomonadales rnfG GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03612 ko00000 Bacteria 1RDEP@1224,2KNPE@206350,2VS39@28216,COG4659@1,COG4659@2 NA|NA|NA U Part of a membrane complex involved in electron transport MAG.C3.5_00933 583345.Mmol_1959 1.8e-87 328.9 Nitrosomonadales rnfE ko:K03613 ko00000 Bacteria 1MW6N@1224,2KNJX@206350,2VNWT@28216,COG4660@1,COG4660@2 NA|NA|NA C Part of a membrane complex involved in electron transport MAG.C3.5_00934 265072.Mfla_0851 1.9e-91 342.0 Nitrosomonadales nth GO:0000702,GO:0000703,GO:0003674,GO:0003824,GO:0003906,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0034644,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0090304,GO:0104004,GO:0140097,GO:1901360 4.2.99.18 ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1MUYQ@1224,2KM03@206350,2VIRB@28216,COG0177@1,COG0177@2 NA|NA|NA L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate MAG.C3.5_00936 748247.AZKH_4524 5.6e-23 115.2 Rhodocyclales avxIA Bacteria 1MU7T@1224,2KZTM@206389,2VNQ5@28216,COG2931@1,COG2931@2 NA|NA|NA Q Haemolysin-type calcium-binding repeat (2 copies) MAG.C3.5_00937 265072.Mfla_1876 1.8e-94 352.1 Nitrosomonadales yciO GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.7.7.87 ko:K07566 R10463 RC00745 ko00000,ko01000,ko03009,ko03016 Bacteria 1MVPM@1224,2KKVR@206350,2VH4T@28216,COG0009@1,COG0009@2 NA|NA|NA J Sua5 YciO YrdC YwlC family protein MAG.C3.5_00938 583345.Mmol_1865 2.4e-46 191.4 Nitrosomonadales miaB GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035597,GO:0035600,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050497,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:0090304,GO:1901360 2.8.4.3 ko:K06168 R10645,R10646,R10647 RC00003,RC00980,RC03221,RC03222 ko00000,ko01000,ko03016 Bacteria 1MURS@1224,2KKNW@206350,2VHQM@28216,COG0621@1,COG0621@2 NA|NA|NA J Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine MAG.C3.5_00939 582744.Msip34_2120 2.5e-154 551.6 Nitrosomonadales ybeZ GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K06217 ko00000 Bacteria 1MVDV@1224,2KM1T@206350,2VH9V@28216,COG1702@1,COG1702@2 NA|NA|NA T AAA domain MAG.C3.5_00940 582744.Msip34_2121 3.5e-60 237.7 Nitrosomonadales ybeY GO:0000469,GO:0000478,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016072,GO:0016151,GO:0016787,GO:0016788,GO:0016892,GO:0016894,GO:0019219,GO:0019222,GO:0019538,GO:0022613,GO:0030490,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043244,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141 2.6.99.2,3.5.4.5 ko:K01489,ko:K03474,ko:K03595,ko:K07042 ko00240,ko00750,ko00983,ko01100,map00240,map00750,map00983,map01100 M00124 R01878,R02485,R05838,R08221 RC00074,RC00514,RC01476 ko00000,ko00001,ko00002,ko01000,ko03009,ko03029 Bacteria 1MZ67@1224,2KMVG@206350,2VSHV@28216,COG0319@1,COG0319@2 NA|NA|NA J Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA MAG.C3.5_00941 582744.Msip34_2122 7.1e-126 456.8 Nitrosomonadales corC GO:0001897,GO:0001906,GO:0001907,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009405,GO:0009987,GO:0016020,GO:0019835,GO:0019836,GO:0031640,GO:0035821,GO:0044003,GO:0044004,GO:0044179,GO:0044364,GO:0044403,GO:0044419,GO:0044464,GO:0044764,GO:0051701,GO:0051704,GO:0051715,GO:0051801,GO:0051817,GO:0051818,GO:0051883,GO:0052331,GO:0071944 ko:K06189 ko00000,ko02000 9.A.40.1.2 Bacteria 1QTU8@1224,2KM7R@206350,2VIU8@28216,COG4535@1,COG4535@2 NA|NA|NA P PFAM CBS domain MAG.C3.5_00942 1101195.Meth11DRAFT_2203 3.4e-22 111.3 Nitrosomonadales Bacteria 1PJHH@1224,2BUJW@1,2KN2C@206350,2W801@28216,32PWC@2 NA|NA|NA MAG.C3.5_00943 265072.Mfla_0647 4e-53 214.2 Nitrosomonadales mscL GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 ko:K03282 ko00000,ko02000 1.A.22.1 Bacteria 1RHG8@1224,2KN6T@206350,2VT9K@28216,COG1970@1,COG1970@2 NA|NA|NA M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell MAG.C3.5_00944 582744.Msip34_2125 2.1e-162 578.9 Nitrosomonadales lnt GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016021,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031224,GO:0031226,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576 ko:K03820 ko00000,ko01000 GT2 iEcSMS35_1347.EcSMS35_0678,iSbBS512_1146.SbBS512_E0590 Bacteria 1MUBU@1224,2KKPV@206350,2VH1I@28216,COG0815@1,COG0815@2 NA|NA|NA M Transfers the fatty acyl group on membrane lipoproteins MAG.C3.5_00945 583345.Mmol_1761 1.1e-15 89.4 Proteobacteria Bacteria 1NBBG@1224,2A7SK@1,30WRK@2 NA|NA|NA S Protein of unknown function (DUF3240) MAG.C3.5_00946 1132855.KB913035_gene882 0.0 1589.7 Nitrosomonadales cznA ko:K07239,ko:K15726 ko00000,ko02000 2.A.6.1,2.A.6.1.2 Bacteria 1NUIV@1224,2KMG8@206350,2VHCZ@28216,COG3696@1,COG3696@2 NA|NA|NA P Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family MAG.C3.5_00947 1132855.KB913035_gene881 1.3e-132 479.6 Nitrosomonadales czcB ko:K15727 ko00000,ko02000 8.A.1.2.1 Bacteria 1QN99@1224,2KMK8@206350,2VQR3@28216,COG0845@1,COG0845@2 NA|NA|NA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family MAG.C3.5_00948 1132855.KB913035_gene880 3.5e-129 468.4 Nitrosomonadales ko:K15725 ko00000,ko02000 1.B.17.2.2 Bacteria 1RDXS@1224,2KMBD@206350,2WFIH@28216,COG1538@1,COG1538@2 NA|NA|NA MU Outer membrane efflux protein MAG.C3.5_00949 1132855.KB913035_gene879 6.8e-15 87.0 Nitrosomonadales Bacteria 1PJSD@1224,2A8U8@1,2KP0K@206350,2W85M@28216,30XXG@2 NA|NA|NA MAG.C3.5_00950 1101195.Meth11DRAFT_2200 1.2e-166 592.4 Nitrosomonadales glyQ GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016874,GO:0016875,GO:0044424,GO:0044444,GO:0044464,GO:0046983,GO:0140098,GO:0140101 6.1.1.14 ko:K01878,ko:K14164 ko00970,map00970 M00360 R03654 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iAF1260.b3560,iAF987.Gmet_2942,iJO1366.b3560,iPC815.YPO4072,iY75_1357.Y75_RS19360 Bacteria 1MVCJ@1224,2KM9U@206350,2VIQX@28216,COG0752@1,COG0752@2 NA|NA|NA J PFAM glycyl-tRNA synthetase alpha subunit MAG.C3.5_00951 582744.Msip34_2127 6.9e-287 993.0 Nitrosomonadales glyS GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046983,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.14 ko:K01879,ko:K14164 ko00970,map00970 M00360 R03654 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iAPECO1_1312.APECO1_2891,iE2348C_1286.E2348C_3810,iECABU_c1320.ECABU_c40010,iECED1_1282.ECED1_4242,iECH74115_1262.ECH74115_4934,iECNA114_1301.ECNA114_3710,iECOK1_1307.ECOK1_4005,iECP_1309.ECP_3661,iECS88_1305.ECS88_3976,iECSF_1327.ECSF_3393,iECSP_1301.ECSP_4554,iECs_1301.ECs4442,iG2583_1286.G2583_4300,iJN678.glyS,iUMN146_1321.UM146_17960,iUTI89_1310.UTI89_C4099,ic_1306.c4378 Bacteria 1MV2F@1224,2KKBM@206350,2VICG@28216,COG0751@1,COG0751@2 NA|NA|NA J Glycyl-tRNA synthetase beta subunit MAG.C3.5_00952 582744.Msip34_2128 1.7e-80 305.4 Nitrosomonadales gmhB GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 ko:K03273 ko00540,ko01100,map00540,map01100 M00064 R05647,R09771 RC00017 ko00000,ko00001,ko00002,ko01000,ko01005 iJN746.PP_0059 Bacteria 1RDGR@1224,2KME7@206350,2VQ49@28216,COG0241@1,COG0241@2 NA|NA|NA E TIGRFAM histidinol-phosphate phosphatase family protein MAG.C3.5_00953 265072.Mfla_0642 3.8e-96 357.8 Nitrosomonadales plsC 2.3.1.51 ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R02241,R09381 RC00004,RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1MY51@1224,2KKR3@206350,2VNAX@28216,COG0204@1,COG0204@2 NA|NA|NA I Phosphate acyltransferases MAG.C3.5_00954 1502770.JQMG01000001_gene1370 7e-82 310.5 Nitrosomonadales ko:K07043 ko00000 Bacteria 1MXZU@1224,2KMCG@206350,2VNC5@28216,COG1451@1,COG1451@2 NA|NA|NA S Protein of unknown function DUF45 MAG.C3.5_00955 1333856.L686_03965 4.7e-66 257.7 Pseudomonas stutzeri group yjdF GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K08984 ko00000 Bacteria 1N7NB@1224,1RS4F@1236,1Z230@136846,COG3647@1,COG3647@2 NA|NA|NA S membrane MAG.C3.5_00956 582744.Msip34_2133 2.6e-19 100.9 Nitrosomonadales bfd ko:K02192 ko00000 Bacteria 1NGGY@1224,2KN7X@206350,2VWVZ@28216,COG2906@1,COG2906@2 NA|NA|NA P BFD-like [2Fe-2S] binding domain MAG.C3.5_00957 582744.Msip34_2134 2e-59 235.0 Nitrosomonadales bfr 1.16.3.1 ko:K03594 ko00860,map00860 R00078 RC02758 ko00000,ko00001,ko01000 Bacteria 1RCW7@1224,2KMPX@206350,2VPZP@28216,COG2193@1,COG2193@2 NA|NA|NA P Ferritin-like domain MAG.C3.5_00959 349521.HCH_00913 3.1e-109 401.4 Oceanospirillales Bacteria 1PK2S@1224,1S338@1236,1XQ9R@135619,COG3000@1,COG3000@2 NA|NA|NA I Fatty acid hydroxylase superfamily MAG.C3.5_00960 266264.Rmet_1902 4.8e-56 224.6 Burkholderiaceae yebB Bacteria 1K7PR@119060,1PUT6@1224,28IT1@1,2VTT1@28216,2Z8S1@2 NA|NA|NA S Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family MAG.C3.5_00961 196367.JNFG01000009_gene6316 1.8e-64 252.7 Burkholderiaceae ko:K07727 ko00000,ko03000 Bacteria 1K2US@119060,1RBPK@1224,2VIYU@28216,COG3655@1,COG3655@2 NA|NA|NA K Cro/C1-type HTH DNA-binding domain MAG.C3.5_00962 1132855.KB913035_gene794 7.4e-37 159.8 Nitrosomonadales Bacteria 1MZ60@1224,2KNW1@206350,2VWQ0@28216,COG3952@1,COG3952@2 NA|NA|NA S Lipid A Biosynthesis N-terminal domain MAG.C3.5_00963 1132855.KB913035_gene795 5.8e-92 344.0 Nitrosomonadales arnC 2.4.1.83 ko:K00721 ko00510,ko01100,map00510,map01100 R01009 RC00005 ko00000,ko00001,ko01000,ko01003 GT2 Bacteria 1MWE5@1224,2KNJ2@206350,2VJ5G@28216,COG0463@1,COG0463@2 NA|NA|NA M Glycosyltransferase like family 2 MAG.C3.5_00964 1502770.JQMG01000001_gene1482 3e-76 291.6 Nitrosomonadales 3.1.3.18 ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 R01334 RC00017 ko00000,ko00001,ko01000 Bacteria 1R9XQ@1224,2KMUQ@206350,2W4RY@28216,COG0546@1,COG0546@2 NA|NA|NA S PFAM Haloacid dehalogenase domain protein hydrolase MAG.C3.5_00965 1132855.KB913035_gene922 6.5e-100 370.2 Nitrosomonadales eda GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008675,GO:0008700,GO:0008948,GO:0016829,GO:0016830,GO:0016831,GO:0016832,GO:0016833,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0106009 4.1.2.14,4.1.3.42 ko:K01625 ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200 M00008,M00061,M00308,M00631 R00470,R05605 RC00307,RC00308,RC00435 ko00000,ko00001,ko00002,ko01000 iECOK1_1307.ECOK1_1968,iYL1228.KPN_02365 Bacteria 1MUVJ@1224,2KM9F@206350,2VQWM@28216,COG0800@1,COG0800@2 NA|NA|NA G PFAM KDPG and KHG aldolase MAG.C3.5_00966 582744.Msip34_1897 6.1e-292 1009.6 Nitrosomonadales edd GO:0003674,GO:0003824,GO:0004456,GO:0005975,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019520,GO:0019521,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0046176,GO:0046177,GO:0046395,GO:0071704,GO:0072329,GO:1901575 4.2.1.12 ko:K01690 ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200 M00008 R02036 RC00543 ko00000,ko00001,ko00002,ko01000 iEcolC_1368.EcolC_1781,iJN746.PP_1010,iPC815.YPO2533,iYL1228.KPN_02366 Bacteria 1MU3T@1224,2KMF8@206350,2VHH2@28216,COG0129@1,COG0129@2 NA|NA|NA EG Belongs to the IlvD Edd family MAG.C3.5_00967 1132855.KB913035_gene920 1.5e-295 1021.5 Nitrosomonadales HA62_32075 ko:K00612 ko00000,ko01000 Bacteria 1MWBA@1224,2KKWD@206350,2VHAK@28216,COG2192@1,COG2192@2 NA|NA|NA O Carbamoyltransferase C-terminus MAG.C3.5_00968 1101195.Meth11DRAFT_1930 1.7e-103 383.3 Nitrosomonadales Bacteria 1QY37@1224,2KKE5@206350,2VKUD@28216,COG1718@1,COG1718@2 NA|NA|NA DT Lipopolysaccharide kinase (Kdo/WaaP) family MAG.C3.5_00969 522306.CAP2UW1_1842 7.3e-46 190.7 Betaproteobacteria 2.1.1.77 ko:K00573 ko00000,ko01000 Bacteria 1Q73B@1224,2W6KU@28216,COG0500@1,COG2226@2 NA|NA|NA H Methyltransferase domain MAG.C3.5_00970 582744.Msip34_1901 8.5e-57 227.3 Nitrosomonadales Bacteria 1RI1E@1224,2KP9V@206350,2WGF8@28216,COG0515@1,COG0515@2 NA|NA|NA KLT Lipopolysaccharide kinase (Kdo/WaaP) family MAG.C3.5_00971 1123354.AUDR01000013_gene533 2.2e-98 366.3 Hydrogenophilales arnT_1 Bacteria 1KTF4@119069,1NMIZ@1224,2VMHK@28216,COG1807@1,COG1807@2 NA|NA|NA M Dolichyl-phosphate-mannose-protein mannosyltransferase MAG.C3.5_00972 582744.Msip34_1902 4.5e-85 321.2 Nitrosomonadales Bacteria 1MXX9@1224,2KM93@206350,2VHSR@28216,COG0515@1,COG0515@2 NA|NA|NA KLT Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core MAG.C3.5_00973 1165096.ARWF01000001_gene859 8.5e-103 380.6 Nitrosomonadales rfaG GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008194,GO:0008610,GO:0008653,GO:0008919,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0046401,GO:0046527,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 ko:K02844 ko00540,ko01100,map00540,map01100 M00080 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 GT4 iSDY_1059.SDY_4061 Bacteria 1NE3V@1224,2KMF4@206350,2VJET@28216,COG0438@1,COG0438@2 NA|NA|NA M Glycosyltransferase Family 4 MAG.C3.5_00974 1165096.ARWF01000001_gene860 4.9e-78 298.1 Nitrosomonadales rfaC ko:K02841 ko00540,ko01100,map00540,map01100 M00080 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 GT9 Bacteria 1MYZA@1224,2KM9K@206350,2VPK7@28216,COG0859@1,COG0859@2 NA|NA|NA M TIGRFAM lipopolysaccharide heptosyltransferase I MAG.C3.5_00975 582744.Msip34_1905 8e-64 250.0 Nitrosomonadales grpE GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009408,GO:0009605,GO:0009628,GO:0009986,GO:0009987,GO:0009991,GO:0016043,GO:0017076,GO:0019904,GO:0022607,GO:0030234,GO:0030246,GO:0030247,GO:0030312,GO:0030554,GO:0031667,GO:0031668,GO:0031669,GO:0032991,GO:0033554,GO:0036094,GO:0040007,GO:0042594,GO:0042802,GO:0042803,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0046983,GO:0050790,GO:0050896,GO:0051082,GO:0051716,GO:0060589,GO:0060590,GO:0065003,GO:0065007,GO:0065009,GO:0071496,GO:0071840,GO:0071944,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 ko:K03687 ko00000,ko03029,ko03110 Bacteria 1RH8T@1224,2KMM6@206350,2VSEQ@28216,COG0576@1,COG0576@2 NA|NA|NA O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ MAG.C3.5_00976 748247.AZKH_4524 3.6e-21 110.9 Rhodocyclales avxIA Bacteria 1MU7T@1224,2KZTM@206389,2VNQ5@28216,COG2931@1,COG2931@2 NA|NA|NA Q Haemolysin-type calcium-binding repeat (2 copies) MAG.C3.5_00977 484770.UFO1_0077 5.4e-43 183.7 Negativicutes avxIA 3.4.24.40 ko:K01406 ko01503,map01503 ko00000,ko00001,ko01000,ko01002 Bacteria 1U2V0@1239,4H5TB@909932,COG2931@1,COG2931@2 NA|NA|NA OQ Haemolysin-type calcium binding protein related domain MAG.C3.5_00978 582744.Msip34_1906 0.0 1138.6 Nitrosomonadales dnaK GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0018995,GO:0019219,GO:0019222,GO:0020003,GO:0022607,GO:0030430,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0033643,GO:0033646,GO:0033655,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043230,GO:0043531,GO:0043656,GO:0043657,GO:0043933,GO:0044085,GO:0044183,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0065010,GO:0070887,GO:0071310,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 1.A.33.1 Bacteria 1MVEN@1224,2KKXR@206350,2VH14@28216,COG0443@1,COG0443@2 NA|NA|NA O Heat shock 70 kDa protein MAG.C3.5_00979 582744.Msip34_1907 8.4e-183 646.4 Nitrosomonadales dnaJ GO:0000988,GO:0000989,GO:0003674,GO:0003756,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006457,GO:0006458,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010556,GO:0015035,GO:0015036,GO:0016020,GO:0016032,GO:0016043,GO:0016491,GO:0016667,GO:0016853,GO:0016860,GO:0016864,GO:0016989,GO:0019219,GO:0019222,GO:0022607,GO:0031323,GO:0031326,GO:0032991,GO:0034641,GO:0034645,GO:0042026,GO:0043167,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051704,GO:0055114,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0140096,GO:0140110,GO:1901360,GO:1901576,GO:1903506,GO:2001141 ko:K03686 ko00000,ko03029,ko03110 Bacteria 1MVMS@1224,2KKPJ@206350,2VHEH@28216,COG0484@1,COG0484@2 NA|NA|NA O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins MAG.C3.5_00980 1132855.KB913035_gene71 1.2e-261 908.7 Nitrosomonadales gnd GO:0003674,GO:0003824,GO:0004616,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006081,GO:0006082,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0019362,GO:0019520,GO:0019521,GO:0019637,GO:0019682,GO:0019693,GO:0019752,GO:0032787,GO:0034641,GO:0042802,GO:0042803,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046176,GO:0046177,GO:0046395,GO:0046483,GO:0046496,GO:0046983,GO:0051156,GO:0051186,GO:0055086,GO:0055114,GO:0071704,GO:0072329,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 1.1.1.343,1.1.1.44 ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 M00004,M00006 R01528,R10221 RC00001,RC00539 ko00000,ko00001,ko00002,ko01000 iECS88_1305.ECS88_2128,iECW_1372.ECW_m2189,iEKO11_1354.EKO11_1765,iPC815.YPO1541,iWFL_1372.ECW_m2189 Bacteria 1MVV8@1224,2KNIB@206350,2VI62@28216,COG0362@1,COG0362@2 NA|NA|NA G Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH MAG.C3.5_00982 485913.Krac_0520 2.8e-46 193.0 Chloroflexi cypA ko:K15468 ko00000,ko01008 Bacteria 2G86W@200795,COG2124@1,COG2124@2 NA|NA|NA C SPTR A9AXU5 Cytochrome P450 MAG.C3.5_00983 207954.MED92_02249 1.5e-104 386.7 Oceanospirillales 6.2.1.30 ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 R02539 RC00004,RC00014 ko00000,ko00001,ko01000 Bacteria 1MV1W@1224,1T9JH@1236,1XM8Q@135619,COG1541@1,COG1541@2 NA|NA|NA H Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) MAG.C3.5_00984 395494.Galf_0017 6e-24 117.9 Betaproteobacteria Bacteria 1R9ZT@1224,2VPPS@28216,COG0642@1,COG2205@2 NA|NA|NA T PhoQ Sensor MAG.C3.5_00985 395494.Galf_0016 4.6e-97 362.1 Betaproteobacteria glnL ko:K07719 ko02020,map02020 M00518 ko00000,ko00001,ko00002,ko02022 Bacteria 1NNCT@1224,2VK0Z@28216,COG0457@1,COG0457@2,COG0784@1,COG0784@2 NA|NA|NA T Response regulator receiver MAG.C3.5_00986 583345.Mmol_1746 9.4e-57 226.1 Nitrosomonadales gloA 4.4.1.5 ko:K01759 ko00620,map00620 R02530 RC00004,RC00740 ko00000,ko00001,ko01000 Bacteria 1RCYX@1224,2KMSF@206350,2VR7R@28216,COG0346@1,COG0346@2 NA|NA|NA E Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione MAG.C3.5_00987 62928.azo0761 1.2e-36 158.7 Rhodocyclales fdx1 ko:K03522,ko:K05337 ko00000,ko04147 Bacteria 1MZ6H@1224,2KX13@206389,2VTZ1@28216,COG1145@1,COG1145@2 NA|NA|NA C Ferredoxin MAG.C3.5_00988 582744.Msip34_1919 1.5e-62 245.7 Nitrosomonadales coaD GO:0003674,GO:0003824,GO:0004595,GO:0005488,GO:0005515,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0015939,GO:0015940,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046390,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 ko:K00954 ko00770,ko01100,map00770,map01100 M00120 R03035 RC00002 ko00000,ko00001,ko00002,ko01000 iPC815.YPO0053,iSDY_1059.SDY_4064 Bacteria 1RD9F@1224,2KMQ5@206350,2VMQQ@28216,COG0669@1,COG0669@2 NA|NA|NA H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate MAG.C3.5_00989 265072.Mfla_0736 5.6e-44 183.7 Nitrosomonadales rsmD GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008990,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0052913,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.171 ko:K08316 R07234 RC00003 ko00000,ko01000,ko03009 Bacteria 1MXKW@1224,2KMSC@206350,2VRD3@28216,COG0742@1,COG0742@2 NA|NA|NA L Conserved hypothetical protein 95 MAG.C3.5_00990 582744.Msip34_1921 3.4e-167 594.7 Nitrosomonadales MA20_05660 ko:K07263 ko00000,ko01000,ko01002 Bacteria 1MU6R@1224,2KM4Y@206350,2VH8D@28216,COG0612@1,COG0612@2 NA|NA|NA S PFAM peptidase M16 domain protein MAG.C3.5_00991 582744.Msip34_1922 2.3e-203 714.9 Nitrosomonadales MA20_05655 ko:K07263 ko00000,ko01000,ko01002 Bacteria 1MVST@1224,2KKDQ@206350,2VHVB@28216,COG0612@1,COG0612@2 NA|NA|NA S Belongs to the peptidase M16 family MAG.C3.5_00992 582744.Msip34_1923 1.1e-143 516.2 Nitrosomonadales ftsY GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019897,GO:0019898,GO:0031224,GO:0031226,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033036,GO:0033365,GO:0034613,GO:0035639,GO:0036094,GO:0042886,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2,3.A.5.7 Bacteria 1MUDU@1224,2KKEC@206350,2VHK7@28216,COG0552@1,COG0552@2 NA|NA|NA U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components MAG.C3.5_00993 265072.Mfla_0732 9.4e-94 349.7 Nitrosomonadales ftsE GO:0000166,GO:0000287,GO:0000910,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0007049,GO:0008144,GO:0008150,GO:0008356,GO:0009898,GO:0009966,GO:0009987,GO:0010646,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019897,GO:0019898,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0030145,GO:0030554,GO:0031234,GO:0032153,GO:0032506,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042173,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043937,GO:0043938,GO:0044085,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0046677,GO:0046872,GO:0046914,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051301,GO:0065007,GO:0070297,GO:0071840,GO:0071944,GO:0090529,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363,GO:1902531 ko:K09811,ko:K09812 ko02010,map02010 M00256 ko00000,ko00001,ko00002,ko02000,ko03036 3.A.1.140 Bacteria 1MVQ4@1224,2KKZI@206350,2VINI@28216,COG2884@1,COG2884@2 NA|NA|NA D TIGRFAM cell division ATP-binding protein FtsE MAG.C3.5_00994 265072.Mfla_0731 1.5e-92 346.3 Nitrosomonadales ftsX GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0009274,GO:0009276,GO:0009987,GO:0016020,GO:0016021,GO:0030312,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0032153,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0051301,GO:0071944 ko:K09811,ko:K09812 ko02010,map02010 M00256 ko00000,ko00001,ko00002,ko02000,ko03036 3.A.1.140 Bacteria 1MU65@1224,2KMF3@206350,2VNGX@28216,COG2177@1,COG2177@2 NA|NA|NA D Part of the ABC transporter FtsEX involved in cellular division MAG.C3.5_00995 1163617.SCD_n01454 4.4e-38 165.2 Betaproteobacteria fimV ko:K08086,ko:K09991 ko00000 Bacteria 1RGYW@1224,2VSW1@28216,COG3827@1,COG3827@2 NA|NA|NA MAG.C3.5_00996 1117958.PE143B_0127485 2.7e-87 329.3 Proteobacteria Bacteria 1NC0C@1224,COG1409@1,COG1409@2 NA|NA|NA S Calcineurin-like phosphoesterase MAG.C3.5_00998 1115515.EV102420_02_00090 7.1e-64 251.1 Gammaproteobacteria Bacteria 1R9PM@1224,1S0BV@1236,COG1100@1,COG1100@2 NA|NA|NA S Small GTP-binding protein MAG.C3.5_00999 216595.PFLU_1881A 4.3e-54 218.4 Bacteria Bacteria 2A3QZ@1,30S8P@2 NA|NA|NA MAG.C3.5_01000 667015.Bacsa_1144 5.9e-09 70.1 Bacteroidaceae Bacteria 2ER46@1,2FS2A@200643,33IPR@2,4ASYE@815,4PFE4@976 NA|NA|NA MAG.C3.5_01001 582744.Msip34_2813 2.4e-77 295.0 Nitrosomonadales glmU GO:0000270,GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0003977,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006040,GO:0006047,GO:0006048,GO:0006139,GO:0006629,GO:0006725,GO:0006793,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009225,GO:0009226,GO:0009252,GO:0009273,GO:0009987,GO:0016051,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0018130,GO:0019134,GO:0019438,GO:0030203,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0042546,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046349,GO:0046483,GO:0046872,GO:0055086,GO:0070569,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1903509 2.3.1.157,2.7.7.23 ko:K04042 ko00520,ko01100,ko01130,map00520,map01100,map01130 M00362 R00416,R05332 RC00002,RC00004,RC00166 ko00000,ko00001,ko00002,ko01000 iECED1_1282.ECED1_4420,iYL1228.KPN_04135 Bacteria 1MUPH@1224,2KMGD@206350,2VH54@28216,COG1207@1,COG1207@2 NA|NA|NA M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain MAG.C3.5_01002 582744.Msip34_2812 1.9e-296 1024.6 Nitrosomonadales glmS GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 R00768 RC00010,RC00163,RC02752 ko00000,ko00001,ko01000,ko01002 Bacteria 1MW4K@1224,2KKU5@206350,2VHVY@28216,COG0449@1,COG0449@2 NA|NA|NA M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source MAG.C3.5_01003 697282.Mettu_0469 1.1e-106 393.7 Methylococcales Bacteria 1MZV7@1224,1SA8X@1236,1XFJF@135618,COG2199@1,COG3706@2 NA|NA|NA T diguanylate cyclase MAG.C3.5_01004 1101195.Meth11DRAFT_2633 3.8e-189 667.9 Nitrosomonadales mdoB GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006490,GO:0006629,GO:0008150,GO:0008152,GO:0008960,GO:0009058,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0042597,GO:0044237,GO:0044238,GO:0044255,GO:0044464,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901576 2.7.8.20 ko:K01002 ko01100,map01100 ko00000,ko01000 Bacteria 1PJPD@1224,2KNNC@206350,2W83A@28216,COG1368@1,COG1368@2 NA|NA|NA M Sulfatase MAG.C3.5_01005 583345.Mmol_2325 9e-298 1028.9 Nitrosomonadales yjjK GO:0003674,GO:0003824,GO:0005488,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:2000112,GO:2000113 3.6.3.25 ko:K06020 ko00000,ko01000 Bacteria 1MU37@1224,2KNFK@206350,2VHES@28216,COG0488@1,COG0488@2 NA|NA|NA S ABC transporter MAG.C3.5_01006 1165096.ARWF01000001_gene1620 8.4e-92 343.6 Nitrosomonadales wcbP Bacteria 1PNDU@1224,2KMGJ@206350,2VIWD@28216,COG0300@1,COG0300@2 NA|NA|NA S Belongs to the short-chain dehydrogenases reductases (SDR) family MAG.C3.5_01007 582744.Msip34_2809 3.8e-79 301.2 Nitrosomonadales dsbA ko:K03673 ko01503,map01503 M00728 ko00000,ko00001,ko00002,ko03110 Bacteria 1RGWH@1224,2KKWZ@206350,2VSFV@28216,COG1651@1,COG1651@2 NA|NA|NA O Thiol disulfide interchange protein MAG.C3.5_01008 582744.Msip34_2808 4.6e-50 204.5 Nitrosomonadales ftsN ko:K03642 ko00000 Bacteria 1RIU5@1224,2KMUG@206350,2VTKT@28216,COG3087@1,COG3087@2 NA|NA|NA D PFAM Sporulation domain protein MAG.C3.5_01009 583345.Mmol_2321 2.7e-262 911.0 Nitrosomonadales argS GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 ko:K01887 ko00970,map00970 M00359,M00360 R03646 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 iAF987.Gmet_1434 Bacteria 1MU4J@1224,2KM4P@206350,2VHT1@28216,COG0018@1,COG0018@2 NA|NA|NA J TIGRFAM arginyl-tRNA synthetase MAG.C3.5_01010 582744.Msip34_0381 1.4e-268 931.8 Nitrosomonadales purH GO:0003674,GO:0003824,GO:0004643,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.2.3,3.5.4.10 ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 M00048 R01127,R04560 RC00026,RC00263,RC00456 ko00000,ko00001,ko00002,ko01000,ko04147 iEcHS_1320.EcHS_A4240,iPC815.YPO3728 Bacteria 1MUDQ@1224,2KKHT@206350,2VJPX@28216,COG0138@1,COG0138@2 NA|NA|NA F TIGRFAM phosphoribosylaminoimidazolecarboxamide formyltransferase IMP cyclohydrolase MAG.C3.5_01011 265072.Mfla_0350 2.7e-27 127.5 Nitrosomonadales fis GO:0000018,GO:0000229,GO:0000785,GO:0000786,GO:0000787,GO:0000789,GO:0000976,GO:0000984,GO:0000985,GO:0001017,GO:0001046,GO:0001047,GO:0001067,GO:0001121,GO:0001130,GO:0001131,GO:0001140,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008301,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016032,GO:0016070,GO:0018130,GO:0019042,GO:0019045,GO:0019046,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031421,GO:0032359,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044374,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044444,GO:0044446,GO:0044464,GO:0044815,GO:0045892,GO:0045893,GO:0045911,GO:0045934,GO:0045935,GO:0046483,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051704,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 ko:K03557,ko:K07712 ko02020,ko05111,map02020,map05111 M00497 ko00000,ko00001,ko00002,ko02022,ko03000,ko03036,ko03400 Bacteria 1N7MJ@1224,2KNBI@206350,2VVQK@28216,COG2901@1,COG2901@2 NA|NA|NA K Bacterial regulatory protein, Fis family MAG.C3.5_01015 582744.Msip34_0345 2.7e-43 181.0 Nitrosomonadales nirD 1.7.1.15 ko:K00363,ko:K05710 ko00360,ko00910,ko01120,ko01220,map00360,map00910,map01120,map01220 M00530,M00545 R00787,R06782,R06783 RC00098,RC00176 br01602,ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS12545,iYO844.BSU03290 Bacteria 1N03R@1224,2KN0F@206350,2VSP4@28216,COG2146@1,COG2146@2 NA|NA|NA P TIGRFAM nitrite reductase NAD(P)H , small subunit MAG.C3.5_01016 1101195.Meth11DRAFT_0413 1.4e-250 872.1 Nitrosomonadales ppkB 3.1.3.16 ko:K01090,ko:K20074 ko00000,ko01000,ko01009 Bacteria 1MV1P@1224,2KKI3@206350,2VH5K@28216,COG0515@1,COG0515@2,COG0631@1,COG0631@2 NA|NA|NA KLT SMART protein phosphatase 2C domain protein MAG.C3.5_01017 666681.M301_2676 7.4e-193 679.9 Nitrosomonadales nasA GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02575 ko00910,map00910 M00615 ko00000,ko00001,ko00002,ko02000 2.A.1.8 iYO844.BSU03330 Bacteria 1MU27@1224,2KKB7@206350,2VI6Q@28216,COG2223@1,COG2223@2 NA|NA|NA P PFAM Major Facilitator Superfamily MAG.C3.5_01018 1101195.Meth11DRAFT_0415 0.0 1545.8 Nitrosomonadales nirB 1.7.1.15 ko:K00362 ko00910,ko01120,map00910,map01120 M00530 R00787 RC00176 ko00000,ko00001,ko00002,ko01000 Bacteria 1MW58@1224,2KKDA@206350,2VIEA@28216,COG1251@1,COG1251@2 NA|NA|NA C TIGRFAM nitrite reductase NAD(P)H , large subunit MAG.C3.5_01019 582744.Msip34_0349 3.8e-97 361.3 Nitrosomonadales cobA GO:0003674,GO:0003824,GO:0004851,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008757,GO:0009058,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019354,GO:0019438,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046156,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 ko:K02302,ko:K02303,ko:K13542 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R02864,R03165,R03194,R03947 RC00003,RC00871,RC01012,RC01034,RC01861 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUI0@1224,2KMJ8@206350,2VICS@28216,COG0007@1,COG0007@2 NA|NA|NA H Tetrapyrrole (Corrin/Porphyrin) Methylases MAG.C3.5_01020 666681.M301_2678 1.9e-183 649.0 Nitrosomonadales Bacteria 1MXAM@1224,2C3QV@1,2KKK2@206350,2W7NZ@28216,2Z7YP@2 NA|NA|NA S Alginate export MAG.C3.5_01021 582744.Msip34_0352 5e-129 467.2 Nitrosomonadales nasD 3.6.3.36 ko:K02049,ko:K10831,ko:K11952,ko:K11953,ko:K15578,ko:K15579 ko00910,ko00920,ko02010,map00910,map00920,map02010 M00188,M00321,M00435,M00438 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.16,3.A.1.16.1,3.A.1.16.2,3.A.1.16.3,3.A.1.17,3.A.1.17.1,3.A.1.17.4 Bacteria 1MUDV@1224,2KKCJ@206350,2VJXH@28216,COG1116@1,COG1116@2 NA|NA|NA P TIGRFAM nitrate ABC transporter, ATPase subunits C and D MAG.C3.5_01022 582744.Msip34_0353 1.4e-130 472.6 Nitrosomonadales nasE ko:K15577 ko00910,ko02010,map00910,map02010 M00438 ko00000,ko00001,ko00002,ko02000 3.A.1.16.1,3.A.1.16.2 Bacteria 1MU6Q@1224,2KKTA@206350,2VH12@28216,COG0600@1,COG0600@2 NA|NA|NA P PFAM binding-protein-dependent transport systems inner membrane component MAG.C3.5_01023 265072.Mfla_0855 1e-277 962.2 Nitrosomonadales nadB GO:0000166,GO:0001716,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008734,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0015922,GO:0016491,GO:0016638,GO:0016641,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044318,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605 1.3.5.4,1.4.3.16 ko:K00244,ko:K00278 ko00020,ko00190,ko00250,ko00620,ko00650,ko00720,ko00760,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00250,map00620,map00650,map00720,map00760,map01100,map01110,map01120,map01130,map01200,map02020 M00009,M00011,M00115,M00150,M00173 R00357,R00481,R02164 RC00006,RC00045,RC02566 ko00000,ko00001,ko00002,ko01000 iAF1260.b2574,iBWG_1329.BWG_2338,iECDH10B_1368.ECDH10B_2742,iECDH1ME8569_1439.ECDH1ME8569_2501,iETEC_1333.ETEC_2787,iEcDH1_1363.EcDH1_1094,iJN678.nadB,iJO1366.b2574,iJR904.b2574,iLF82_1304.LF82_1433,iNRG857_1313.NRG857_12785,iSbBS512_1146.nadB,iY75_1357.Y75_RS13445,iYL1228.KPN_02899 Bacteria 1RBQW@1224,2KMAD@206350,2VHA7@28216,COG0029@1,COG0029@2 NA|NA|NA H Catalyzes the oxidation of L-aspartate to iminoaspartate MAG.C3.5_01024 582744.Msip34_1787 1.9e-100 372.1 Nitrosomonadales rpoE GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0006950,GO:0006970,GO:0008150,GO:0009266,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 ko:K03088 ko00000,ko03021 Bacteria 1MX7T@1224,2KKVH@206350,2VHR2@28216,COG1595@1,COG1595@2 NA|NA|NA K RNA polymerase sigma factor, sigma-70 family MAG.C3.5_01025 582744.Msip34_1786 2.4e-43 181.8 Nitrosomonadales rseA GO:0000988,GO:0000989,GO:0003674,GO:0008150,GO:0009889,GO:0010556,GO:0016989,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 ko:K03597 ko00000,ko03021 Bacteria 1QANZ@1224,2KN4N@206350,2VVPR@28216,COG3073@1,COG3073@2 NA|NA|NA T PFAM Anti sigma-E protein RseA MAG.C3.5_01026 582744.Msip34_1785 2.4e-109 402.1 Nitrosomonadales rseB GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0044464,GO:0045152 ko:K03598 ko00000,ko03021 Bacteria 1MUQ8@1224,2KKK1@206350,2VMZQ@28216,COG3026@1,COG3026@2 NA|NA|NA T MucB/RseB C-terminal domain MAG.C3.5_01027 666681.M301_1953 1.2e-29 136.3 Nitrosomonadales rseC GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0016020,GO:0044464,GO:0050896,GO:0071944 ko:K03803 ko00000,ko03021 Bacteria 1PVB3@1224,2KNVG@206350,2VYDY@28216,COG3086@1,COG3086@2 NA|NA|NA T PFAM Positive regulator of sigma(E) RseC MucC MAG.C3.5_01028 582744.Msip34_1784 5.3e-206 723.8 Nitrosomonadales mucD 3.4.21.107 ko:K04771 ko01503,ko02020,map01503,map02020 M00728 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 Bacteria 1MU63@1224,2KKP9@206350,2VI4Q@28216,COG0265@1,COG0265@2 NA|NA|NA M Belongs to the peptidase S1C family MAG.C3.5_01029 582744.Msip34_1783 0.0 1105.1 Nitrosomonadales lepA GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0006950,GO:0006970,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009268,GO:0009409,GO:0009628,GO:0009651,GO:0009987,GO:0010467,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0042802,GO:0043021,GO:0043023,GO:0043024,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0050896,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K03596 ko05134,map05134 ko00000,ko00001 Bacteria 1MVZA@1224,2KM0F@206350,2VHM5@28216,COG0481@1,COG0481@2 NA|NA|NA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner MAG.C3.5_01030 582744.Msip34_1782 3.8e-115 421.0 Nitrosomonadales lepB 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Bacteria 1MXUF@1224,2KKBB@206350,2VJ9D@28216,COG0681@1,COG0681@2 NA|NA|NA U Belongs to the peptidase S26 family MAG.C3.5_01031 265072.Mfla_0862 5e-24 117.5 Nitrosomonadales Bacteria 1N71K@1224,2KN83@206350,2W80S@28216,COG4969@1,COG4969@2 NA|NA|NA NU Domain of unknown function (DUF4845) MAG.C3.5_01032 582744.Msip34_1780 1.1e-81 309.7 Nitrosomonadales rnc GO:0000287,GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016072,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019899,GO:0022613,GO:0032296,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Bacteria 1MUQ6@1224,2KM33@206350,2VI4M@28216,COG0571@1,COG0571@2 NA|NA|NA K Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism MAG.C3.5_01034 582744.Msip34_0389 9.2e-106 389.8 Nitrosomonadales fmt2 3.2.2.10 ko:K06966 ko00230,ko00240,map00230,map00240 R00182,R00510 RC00063,RC00318 ko00000,ko00001,ko01000 Bacteria 1MU6N@1224,2KKE8@206350,2VK4I@28216,COG1611@1,COG1611@2 NA|NA|NA S Belongs to the LOG family MAG.C3.5_01035 1236959.BAMT01000011_gene3207 1.1e-32 146.0 Nitrosomonadales Bacteria 1N98H@1224,2C1YJ@1,2KN7D@206350,2VVT5@28216,32ZXK@2 NA|NA|NA S Protein of unknown function (DUF2782) MAG.C3.5_01036 582744.Msip34_0391 1e-120 439.9 Nitrosomonadales thrB 2.7.1.39 ko:K02204 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 M00018 R01771 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUKJ@1224,2KM53@206350,2VH2I@28216,COG2334@1,COG2334@2 NA|NA|NA F Belongs to the pseudomonas-type ThrB family MAG.C3.5_01037 1163617.SCD_n00048 8.7e-59 233.8 Betaproteobacteria Bacteria 1N9UJ@1224,2VNM5@28216,COG5473@1,COG5473@2 NA|NA|NA MAG.C3.5_01038 1502770.JQMG01000001_gene1233 0.0 1189.1 Nitrosomonadales uvrD GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006289,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0015616,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017116,GO:0022607,GO:0031297,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0042802,GO:0043142,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0045005,GO:0046483,GO:0050896,GO:0051259,GO:0051260,GO:0051276,GO:0051716,GO:0065003,GO:0070035,GO:0070581,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 1MU0G@1224,2KKFV@206350,2VH4I@28216,COG0210@1,COG0210@2 NA|NA|NA L UvrD REP helicase MAG.C3.5_01039 1132855.KB913035_gene2410 4.4e-273 946.8 Nitrosomonadales groL GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0008144,GO:0008150,GO:0009266,GO:0009314,GO:0009405,GO:0009408,GO:0009628,GO:0009966,GO:0009967,GO:0009986,GO:0009987,GO:0010646,GO:0010647,GO:0016032,GO:0016462,GO:0016465,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018995,GO:0019058,GO:0019068,GO:0020003,GO:0022610,GO:0023051,GO:0023056,GO:0030430,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033643,GO:0033644,GO:0033646,GO:0033647,GO:0033648,GO:0033655,GO:0035639,GO:0035821,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043230,GO:0043656,GO:0043657,GO:0043900,GO:0043903,GO:0044174,GO:0044175,GO:0044183,GO:0044215,GO:0044216,GO:0044217,GO:0044218,GO:0044279,GO:0044403,GO:0044406,GO:0044419,GO:0044421,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0044650,GO:0044764,GO:0046812,GO:0046872,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051704,GO:0051817,GO:0052047,GO:0052212,GO:0061077,GO:0065007,GO:0065010,GO:0097159,GO:0097367,GO:0101031,GO:1901222,GO:1901224,GO:1901265,GO:1901363,GO:1902531,GO:1902533,GO:1990220,GO:2000535 ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Bacteria 1MURR@1224,2KKWW@206350,2VIW1@28216,COG0459@1,COG0459@2 NA|NA|NA O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions MAG.C3.5_01040 1123392.AQWL01000002_gene1818 8.6e-39 166.0 Hydrogenophilales groS GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010033,GO:0016032,GO:0016465,GO:0019058,GO:0019068,GO:0032991,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051704,GO:0061077,GO:0101031,GO:1990220 ko:K04078 ko00000,ko03029,ko03110 Bacteria 1KRSD@119069,1MZ2X@1224,2VSKJ@28216,COG0234@1,COG0234@2 NA|NA|NA O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter MAG.C3.5_01041 265072.Mfla_0376 1.4e-26 126.3 Nitrosomonadales Bacteria 1PJJA@1224,2EP1C@1,2KN97@206350,2W810@28216,33GN7@2 NA|NA|NA MAG.C3.5_01043 1101195.Meth11DRAFT_0462 2.2e-176 625.2 Nitrosomonadales bioA GO:0003674,GO:0003824,GO:0004015,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.6.1.62 ko:K00833 ko00780,ko01100,map00780,map01100 M00123,M00573,M00577 R03231 RC00006,RC00887 ko00000,ko00001,ko00002,ko01000,ko01007 iIT341.HP0976,iUTI89_1310.UTI89_C0772,iZ_1308.Z0993 Bacteria 1MU2N@1224,2KKMC@206350,2VKJI@28216,COG0161@1,COG0161@2 NA|NA|NA H Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family MAG.C3.5_01044 582744.Msip34_0431 9.4e-147 526.9 Nitrosomonadales dacB 3.4.16.4 ko:K07259 ko00550,map00550 ko00000,ko00001,ko01000,ko01002,ko01011 Bacteria 1MW40@1224,2KKBD@206350,2VH20@28216,COG2027@1,COG2027@2 NA|NA|NA M PFAM peptidase S13 D-Ala-D-Ala carboxypeptidase C MAG.C3.5_01045 265072.Mfla_0379 2e-61 241.9 Nitrosomonadales fbp 5.2.1.8 ko:K01802,ko:K03772 ko00000,ko01000,ko03110 Bacteria 1RDA1@1224,2KMQT@206350,2VSIG@28216,COG0545@1,COG0545@2 NA|NA|NA O peptidyl-prolyl cis-trans isomerase MAG.C3.5_01046 582744.Msip34_0434 3.1e-69 267.7 Nitrosomonadales yhfA ko:K07397 ko00000 Bacteria 1RCZW@1224,2KMKZ@206350,2VR62@28216,COG1765@1,COG1765@2 NA|NA|NA O OsmC-like protein MAG.C3.5_01047 582744.Msip34_0435 7.2e-54 216.5 Nitrosomonadales Bacteria 1RIR2@1224,2KMVH@206350,2W7ZA@28216,COG0346@1,COG0346@2 NA|NA|NA E PFAM Glyoxalase bleomycin resistance protein dioxygenase MAG.C3.5_01048 1236959.BAMT01000005_gene53 5.5e-28 130.2 Nitrosomonadales Z012_04380 Bacteria 1N8RK@1224,2KN3A@206350,2VUJW@28216,COG4390@1,COG4390@2 NA|NA|NA S Uncharacterized protein conserved in bacteria (DUF2322) MAG.C3.5_01049 582744.Msip34_0438 5.3e-78 297.4 Nitrosomonadales coq7 ko:K06134 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00128 R04984,R08775 RC01254 ko00000,ko00001,ko00002,ko01000 Bacteria 1RAA1@1224,2KMJS@206350,2VQRE@28216,COG2941@1,COG2941@2 NA|NA|NA H Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol MAG.C3.5_01050 582744.Msip34_0439 3.6e-207 727.6 Nitrosomonadales ctpA 3.4.21.102 ko:K03797 ko00000,ko01000,ko01002 Bacteria 1MU39@1224,2KKV4@206350,2VJ86@28216,COG0793@1,COG0793@2 NA|NA|NA M Belongs to the peptidase S41A family MAG.C3.5_01051 582744.Msip34_0440 2.1e-34 151.4 Nitrosomonadales ko:K07401 ko00000 Bacteria 1MZ5V@1224,2KN56@206350,2VUXZ@28216,COG3526@1,COG3526@2 NA|NA|NA O Rdx family MAG.C3.5_01052 582744.Msip34_0442 1.3e-53 216.1 Nitrosomonadales yafL GO:0000270,GO:0003674,GO:0003824,GO:0004175,GO:0006022,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009254,GO:0016787,GO:0019538,GO:0030203,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901135,GO:1901564 ko:K19303 ko00000,ko01000,ko01002,ko01011 Bacteria 1N0EE@1224,2KMWD@206350,2VSHN@28216,COG0791@1,COG0791@2 NA|NA|NA M PFAM NLP P60 protein MAG.C3.5_01054 582744.Msip34_0444 3.3e-268 930.6 Nitrosomonadales aarF ko:K03688 ko00000 Bacteria 1MU1Z@1224,2KNIT@206350,2VJ9H@28216,COG0661@1,COG0661@2 NA|NA|NA S ABC1 family MAG.C3.5_01055 582744.Msip34_1508 9.4e-67 259.6 Nitrosomonadales ffsA GO:0003674,GO:0003824,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0015947,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0030270,GO:0043446,GO:0044237,GO:0044281,GO:0071704 2.3.1.101 ko:K00672 ko00680,ko01100,ko01120,ko01200,map00680,map01100,map01120,map01200 M00567 R03390 RC00197,RC00870,RC02881 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVSD@1224,2KME8@206350,2VJSP@28216,COG2037@1,COG2037@2 NA|NA|NA C Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT) MAG.C3.5_01056 582744.Msip34_1509 1.4e-49 203.4 Nitrosomonadales fhcC GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0044237,GO:0044281 1.2.7.12 ko:K00202 ko00680,ko01100,ko01120,ko01200,map00680,map01100,map01120,map01200 M00567 R03015,R08060,R11743 RC00197,RC00323 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUUQ@1224,2KKC9@206350,2VMB1@28216,COG2218@1,COG2218@2 NA|NA|NA C PFAM glutamate synthase alpha subunit domain protein MAG.C3.5_01057 265072.Mfla_1667 3.3e-71 274.6 Nitrosomonadales yigZ 2.1.1.45,3.4.13.9 ko:K00560,ko:K01271 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 M00053 R02101 RC00219,RC00332 ko00000,ko00001,ko00002,ko01000,ko01002 Bacteria 1NFJC@1224,2KMQY@206350,2VWRI@28216,COG1739@1,COG1739@2 NA|NA|NA S Uncharacterized protein family UPF0029 MAG.C3.5_01059 525257.HMPREF0204_14146 9.1e-54 217.2 Chryseobacterium Bacteria 1I0S4@117743,3ZTII@59732,4NGYF@976,COG0500@1,COG2226@2 NA|NA|NA Q Mycolic acid cyclopropane synthetase MAG.C3.5_01060 1236959.BAMT01000014_gene2931 1.1e-64 253.1 Nitrosomonadales yjgA ko:K09889 ko00000,ko03009 Bacteria 1MZ4R@1224,2KMRU@206350,2VSGZ@28216,COG3028@1,COG3028@2 NA|NA|NA S Belongs to the UPF0307 family MAG.C3.5_01061 582744.Msip34_2183 9.5e-246 856.3 Nitrosomonadales gcr Bacteria 1MWEH@1224,2KKY4@206350,2VIZV@28216,COG4389@1,COG4389@2 NA|NA|NA L Site-specific recombinase MAG.C3.5_01062 582744.Msip34_2184 5.4e-34 151.4 Nitrosomonadales Bacteria 1NM18@1224,2KN53@206350,2W7YW@28216,COG0265@1,COG0265@2 NA|NA|NA O Domain present in PSD-95, Dlg, and ZO-1/2. MAG.C3.5_01063 582744.Msip34_2185 1.3e-89 335.9 Nitrosomonadales mog GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019538,GO:0019637,GO:0019693,GO:0032324,GO:0034641,GO:0042278,GO:0042802,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061598,GO:0070566,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.7.7.75,2.8.1.12 ko:K03635,ko:K03831 ko00790,ko01100,ko04122,map00790,map01100,map04122 R09395,R09726 RC00002,RC02507 ko00000,ko00001,ko01000 iAPECO1_1312.APECO1_1969,iECABU_c1320.ECABU_c00100,iECED1_1282.ECED1_0009,iECNA114_1301.ECNA114_4653,iECP_1309.ECP_0010,iECS88_1305.ECS88_0010,iECSF_1327.ECSF_0009,iECUMN_1333.ECUMN_0010,iEcSMS35_1347.EcSMS35_0008,iLF82_1304.LF82_1379,iNRG857_1313.NRG857_00050,iUMN146_1321.UM146_22820 Bacteria 1R9W2@1224,2KMHF@206350,2VH28@28216,COG0521@1,COG0521@2 NA|NA|NA H TIGRFAM molybdenum cofactor synthesis domain MAG.C3.5_01064 666681.M301_2175 1.9e-106 392.5 Nitrosomonadales thiL GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009030,GO:0009058,GO:0009108,GO:0009110,GO:0009228,GO:0009229,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0042357,GO:0042364,GO:0042723,GO:0042724,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.4.16 ko:K00946 ko00730,ko01100,map00730,map01100 M00127 R00617 RC00002 ko00000,ko00001,ko00002,ko01000 iSFV_1184.SFV_0382,iYO844.BSU05900 Bacteria 1MU9X@1224,2KKQ6@206350,2VI0Q@28216,COG0611@1,COG0611@2 NA|NA|NA H Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 MAG.C3.5_01065 1236959.BAMT01000014_gene2919 1.2e-61 242.7 Nitrosomonadales pgpA GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008962,GO:0009058,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016021,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0030258,GO:0031224,GO:0031226,GO:0032026,GO:0042221,GO:0042577,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0046839,GO:0050896,GO:0071704,GO:0071944,GO:0090407,GO:1901576 3.1.3.27 ko:K01095 ko00564,ko01100,map00564,map01100 R02029 RC00017 ko00000,ko00001,ko01000 iECSP_1301.ECSP_0485,iECUMN_1333.ECUMN_0456,iECs_1301.ECs0471,iG2583_1286.G2583_0529,iPC815.YPO3179,iZ_1308.Z0520 Bacteria 1MZJA@1224,2KN19@206350,2VSP2@28216,COG1267@1,COG1267@2 NA|NA|NA I Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) MAG.C3.5_01066 666681.M301_2177 6.8e-47 193.7 Nitrosomonadales ygaD GO:0003674,GO:0003824,GO:0016787,GO:0016810,GO:0016811,GO:0019159 3.5.1.42 ko:K03742,ko:K03743 ko00760,map00760 R02322 RC00100 ko00000,ko00001,ko01000 Bacteria 1RH2Y@1224,2KMZT@206350,2VSQF@28216,COG1546@1,COG1546@2 NA|NA|NA S Belongs to the CinA family MAG.C3.5_01068 582744.Msip34_0996 1.3e-39 168.7 Nitrosomonadales acnB GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006081,GO:0006082,GO:0006091,GO:0006097,GO:0006099,GO:0006101,GO:0006417,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009060,GO:0009062,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0010608,GO:0015980,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017001,GO:0017144,GO:0019222,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019752,GO:0031323,GO:0031326,GO:0032268,GO:0032787,GO:0034248,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046395,GO:0046459,GO:0046487,GO:0047456,GO:0048037,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0060255,GO:0065007,GO:0071704,GO:0072329,GO:0072350,GO:0080090,GO:0097159,GO:1901363,GO:1901575,GO:2000112 4.2.1.3,4.2.1.99 ko:K01682 ko00020,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00173 R01324,R01325,R01900,R04425 RC00497,RC00498,RC00618,RC01153 br01601,ko00000,ko00001,ko00002,ko01000 iECIAI1_1343.ECIAI1_0116,iPC815.YPO3415 Bacteria 1MVCR@1224,2KKKN@206350,2VHT2@28216,COG1049@1,COG1049@2 NA|NA|NA C Belongs to the aconitase IPM isomerase family MAG.C3.5_01069 1159870.KB907784_gene3357 1.2e-226 795.0 Alcaligenaceae Bacteria 1MUZK@1224,2VHVG@28216,3T868@506,COG0457@1,COG0457@2 NA|NA|NA S Tetratricopeptide repeat MAG.C3.5_01070 582744.Msip34_1000 3.8e-103 381.3 Nitrosomonadales rlmJ GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008988,GO:0009451,GO:0009987,GO:0010467,GO:0015976,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036307,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.266 ko:K07115 ko00000,ko01000,ko03009 Bacteria 1MWGA@1224,2KM86@206350,2VHM4@28216,COG2961@1,COG2961@2 NA|NA|NA S Specifically methylates the adenine in position 2030 of 23S rRNA MAG.C3.5_01071 582744.Msip34_1001 3.7e-56 224.6 Nitrosomonadales sodC GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004784,GO:0005488,GO:0005507,GO:0005575,GO:0005576,GO:0005615,GO:0005623,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008270,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0030288,GO:0030313,GO:0031975,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0042597,GO:0043167,GO:0043169,GO:0044237,GO:0044421,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071450,GO:0071451,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748 1.15.1.1 ko:K04565 ko04146,ko04213,ko05014,ko05016,ko05020,map04146,map04213,map05014,map05016,map05020 ko00000,ko00001,ko01000 iEcolC_1368.EcolC_1983 Bacteria 1RGV4@1224,2KNB6@206350,2VSTR@28216,COG2032@1,COG2032@2 NA|NA|NA P Destroys radicals which are normally produced within the cells and which are toxic to biological systems MAG.C3.5_01073 582744.Msip34_1003 3.5e-102 378.3 Nitrosomonadales zitB GO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0044464,GO:0046873,GO:0046915,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662 ko:K16264 ko00000,ko02000 2.A.4.1 iNRG857_1313.NRG857_03325,iPC815.YPO1129 Bacteria 1QUZ5@1224,2KMTU@206350,2WGMK@28216,COG1230@1,COG1230@2 NA|NA|NA P TIGRFAM cation diffusion facilitator family transporter MAG.C3.5_01074 1123392.AQWL01000004_gene2579 2.4e-78 298.5 Hydrogenophilales udgB GO:0003674,GO:0003824,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0033958,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 ko:K21929 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1KSM7@119069,1MW91@1224,2VQ3T@28216,COG1573@1,COG1573@2 NA|NA|NA L Uracil DNA glycosylase superfamily MAG.C3.5_01075 1122236.KB905141_gene658 3.2e-23 113.6 Nitrosomonadales dmpI 5.3.2.6 ko:K01821 ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220 M00569 R03966,R05389 RC01040,RC01355 ko00000,ko00001,ko00002,ko01000 Bacteria 1PTA7@1224,2KNAP@206350,2VW9V@28216,COG1942@1,COG1942@2 NA|NA|NA S Tautomerase enzyme MAG.C3.5_01076 1132855.KB913035_gene2030 7.5e-279 966.1 Nitrosomonadales uvrC GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009380,GO:0009381,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016787,GO:0016788,GO:0030312,GO:0031668,GO:0032991,GO:0033554,GO:0034641,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1902494,GO:1905347,GO:1905348,GO:1990391 ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 Bacteria 1MV38@1224,2KMD9@206350,2VIM4@28216,COG0322@1,COG0322@2 NA|NA|NA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision MAG.C3.5_01077 582744.Msip34_1006 2.2e-70 271.9 Nitrosomonadales pgsA 2.7.8.41,2.7.8.5 ko:K00995,ko:K08744 ko00564,ko01100,map00564,map01100 R01801,R02030 RC00002,RC00017,RC02795 ko00000,ko00001,ko01000 Bacteria 1RCZ7@1224,2KMN8@206350,2VQI2@28216,COG0558@1,COG0558@2 NA|NA|NA I Belongs to the CDP-alcohol phosphatidyltransferase class-I family MAG.C3.5_01080 582744.Msip34_2814 1.9e-50 205.3 Nitrosomonadales atpC GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 iHN637.CLJU_RS01195 Bacteria 1RHE4@1224,2KMM0@206350,2VR2R@28216,COG0355@1,COG0355@2 NA|NA|NA C Produces ATP from ADP in the presence of a proton gradient across the membrane MAG.C3.5_01081 59538.XP_005975242.1 4.1e-251 873.6 Cetartiodactyla Mammalia 38CQ6@33154,3BAHK@33208,3CV2G@33213,3J5C0@40674,4851Z@7711,497E8@7742,4IZEE@91561,COG0055@1,KOG1350@2759 NA|NA|NA C ATP synthase subunit beta MAG.C3.5_01082 1122236.KB905145_gene2485 1e-132 479.6 Nitrosomonadales atpG GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0016469,GO:0030312,GO:0032991,GO:0040007,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045259,GO:0045260,GO:0071944,GO:0098796,GO:0098797 ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 iLJ478.TM1611 Bacteria 1MU28@1224,2KKJZ@206350,2VJBW@28216,COG0224@1,COG0224@2 NA|NA|NA C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex MAG.C3.5_01083 582744.Msip34_2817 2.1e-269 934.5 Nitrosomonadales atpA GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 3.6.3.14 ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194,ko01000 3.A.2.1 iIT341.HP1134,iSB619.SA_RS10975,iSbBS512_1146.SbBS512_E4187 Bacteria 1MUG7@1224,2KKGG@206350,2VHQU@28216,COG0056@1,COG0056@2 NA|NA|NA C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit MAG.C3.5_01084 265072.Mfla_2747 1.1e-68 266.2 Nitrosomonadales atpH GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 iSF_1195.SF3815,iSFxv_1172.SFxv_4157,iS_1188.S3953 Bacteria 1MVRH@1224,2KM92@206350,2VSJV@28216,COG0712@1,COG0712@2 NA|NA|NA C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation MAG.C3.5_01085 582744.Msip34_2819 6.7e-25 120.6 Nitrosomonadales atpF GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031225,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 e_coli_core.b3736,iAF1260.b3736,iB21_1397.B21_03564,iBWG_1329.BWG_3427,iE2348C_1286.E2348C_4046,iEC042_1314.EC042_4123,iEC55989_1330.EC55989_4211,iECABU_c1320.ECABU_c42210,iECBD_1354.ECBD_4296,iECB_1328.ECB_03620,iECDH10B_1368.ECDH10B_3923,iECDH1ME8569_1439.ECDH1ME8569_3624,iECD_1391.ECD_03620,iECED1_1282.ECED1_4426,iECH74115_1262.ECH74115_5172,iECIAI1_1343.ECIAI1_3920,iECIAI39_1322.ECIAI39_4340,iECO103_1326.ECO103_4422,iECO111_1330.ECO111_4570,iECO26_1355.ECO26_4842,iECOK1_1307.ECOK1_4185,iECP_1309.ECP_3935,iECS88_1305.ECS88_4158,iECSE_1348.ECSE_4026,iECSF_1327.ECSF_3584,iECSP_1301.ECSP_4786,iECUMN_1333.ECUMN_4266,iECW_1372.ECW_m4039,iECs_1301.ECs4678,iEKO11_1354.EKO11_4609,iETEC_1333.ETEC_4027,iEcDH1_1363.EcDH1_4231,iEcE24377_1341.EcE24377A_4252,iEcHS_1320.EcHS_A3952,iEcSMS35_1347.EcSMS35_4104,iEcolC_1368.EcolC_4258,iG2583_1286.G2583_4532,iJO1366.b3736,iJR904.b3736,iSDY_1059.SDY_4012,iSFV_1184.SFV_3762,iSF_1195.SF3816,iSFxv_1172.SFxv_4159,iSSON_1240.SSON_3883,iS_1188.S3952,iSbBS512_1146.SbBS512_E4185,iUMN146_1321.UM146_18870,iUMNK88_1353.UMNK88_4548,iUTI89_1310.UTI89_C4291,iWFL_1372.ECW_m4039,iY75_1357.Y75_RS18390,iZ_1308.Z5234,ic_1306.c4664 Bacteria 1RHZ0@1224,2KMJT@206350,2VRMS@28216,COG0711@1,COG0711@2 NA|NA|NA C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) MAG.C3.5_01086 1236959.BAMT01000007_gene2614 4.5e-37 160.2 Nitrosomonadales atpE GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 Bacteria 1N1NA@1224,2KN1J@206350,2VTY0@28216,32S3K@2,COG0636@1 NA|NA|NA C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation MAG.C3.5_01087 1122236.KB905145_gene2480 1.2e-127 462.6 Nitrosomonadales atpB GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194,ko03110 3.A.2.1 iAPECO1_1312.APECO1_2725,iE2348C_1286.E2348C_4048,iEC042_1314.EC042_4125,iECABU_c1320.ECABU_c42230,iECED1_1282.ECED1_4428,iECIAI39_1322.ECIAI39_4342,iECNA114_1301.ECNA114_3887,iECOK1_1307.ECOK1_4187,iECP_1309.ECP_3937,iECS88_1305.ECS88_4160,iECSF_1327.ECSF_3586,iECUMN_1333.ECUMN_4268,iEcSMS35_1347.EcSMS35_4106,iLF82_1304.LF82_0192,iNRG857_1313.NRG857_18615,iUMN146_1321.UM146_18880,iUMNK88_1353.UMNK88_4550,iUTI89_1310.UTI89_C4293,ic_1306.c4666 Bacteria 1MV87@1224,2KKB3@206350,2VHR5@28216,COG0356@1,COG0356@2 NA|NA|NA C it plays a direct role in the translocation of protons across the membrane MAG.C3.5_01088 666681.M301_2789 1.4e-15 89.4 Betaproteobacteria atpI GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044464,GO:0044769,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 ko:K02116 ko00000,ko00194 3.A.2.1 iSSON_1240.SSON_3880 Bacteria 1R3CS@1224,2WIGV@28216,COG3312@1,COG3312@2 NA|NA|NA C ATP synthase I chain MAG.C3.5_01089 582744.Msip34_2823 4.7e-101 374.4 Nitrosomonadales parB ko:K03497 ko00000,ko03000,ko03036,ko04812 Bacteria 1MW2E@1224,2KM1A@206350,2VIG0@28216,COG1475@1,COG1475@2 NA|NA|NA K Belongs to the ParB family MAG.C3.5_01090 265072.Mfla_2753 1.8e-110 405.6 Nitrosomonadales parA ko:K03496 ko00000,ko03036,ko04812 Bacteria 1MV43@1224,2KM9W@206350,2VHNK@28216,COG1192@1,COG1192@2 NA|NA|NA D PFAM Cobyrinic acid a,c-diamide synthase MAG.C3.5_01091 1236959.BAMT01000007_gene2608 2.3e-68 265.4 Nitrosomonadales rsmG GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 ko:K03501 ko00000,ko01000,ko03009,ko03036 Bacteria 1MY0K@1224,2KMP1@206350,2VR3B@28216,COG0357@1,COG0357@2 NA|NA|NA J Specifically methylates the N7 position of guanine in position 527 of 16S rRNA MAG.C3.5_01092 582744.Msip34_2826 0.0 1077.4 Nitrosomonadales gidA GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 ko:K03495 R08701 RC00053,RC00209,RC00870 ko00000,ko03016,ko03036 Bacteria 1MU6F@1224,2KMCJ@206350,2VIGG@28216,COG0445@1,COG0445@2 NA|NA|NA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 MAG.C3.5_01093 1502770.JQMG01000001_gene24 7.1e-42 176.8 Betaproteobacteria shp Bacteria 1N1Z3@1224,2VU18@28216,COG2010@1,COG2010@2 NA|NA|NA C Domain of unknown function (DUF1924) MAG.C3.5_01094 1122236.KB905145_gene2473 4e-53 214.9 Nitrosomonadales Bacteria 1RIG7@1224,2KNX3@206350,2VQQ0@28216,COG3658@1,COG3658@2 NA|NA|NA C Prokaryotic cytochrome b561 MAG.C3.5_01095 582744.Msip34_2827 2.3e-187 661.8 Nitrosomonadales mnmE GO:0000166,GO:0001510,GO:0001882,GO:0001883,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006457,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009268,GO:0009451,GO:0009628,GO:0009636,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0030488,GO:0030955,GO:0031420,GO:0032259,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0042221,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0061077,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 ko:K03650 R08701 RC00053,RC00209,RC00870 ko00000,ko01000,ko03016 Bacteria 1MUCQ@1224,2KKTD@206350,2VHCJ@28216,COG0486@1,COG0486@2 NA|NA|NA J Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 MAG.C3.5_01096 582744.Msip34_2828 2.4e-203 714.9 Nitrosomonadales yidC GO:0002790,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022607,GO:0031224,GO:0031226,GO:0032940,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051205,GO:0051234,GO:0051259,GO:0051260,GO:0051641,GO:0061024,GO:0065003,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044,ko03029 2.A.9 Bacteria 1MV5M@1224,2KM2S@206350,2VHIA@28216,COG0706@1,COG0706@2 NA|NA|NA U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins MAG.C3.5_01097 582744.Msip34_2584 0.0 1767.7 Nitrosomonadales metH GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0019842,GO:0031419,GO:0032259,GO:0034641,GO:0035999,GO:0036094,GO:0036211,GO:0042084,GO:0042558,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050667,GO:0051186,GO:0071704,GO:0097159,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 ko:K00548 ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230 M00017 R00946,R09365 RC00035,RC00113,RC01241 ko00000,ko00001,ko00002,ko01000 iECO103_1326.ECO103_4764,iECUMN_1333.ECUMN_4545 Bacteria 1MV6G@1224,2KKBF@206350,2VHYQ@28216,COG0646@1,COG0646@2,COG1410@1,COG1410@2 NA|NA|NA E Vitamin B12 dependent methionine synthase activation MAG.C3.5_01098 582744.Msip34_2583 2.4e-165 588.6 Nitrosomonadales Bacteria 1MVW1@1224,2KKE7@206350,2VKZY@28216,COG3434@1,COG3434@2 NA|NA|NA T PFAM EAL domain MAG.C3.5_01099 582744.Msip34_2582 4.5e-213 747.3 Nitrosomonadales murC 6.3.2.4,6.3.2.45,6.3.2.8 ko:K01921,ko:K01924,ko:K02558 ko00471,ko00473,ko00550,ko01100,ko01502,map00471,map00473,map00550,map01100,map01502 R01150,R03193 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 Bacteria 1MUC5@1224,2KMB0@206350,2VIX5@28216,COG0773@1,COG0773@2 NA|NA|NA M Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate MAG.C3.5_01100 582744.Msip34_1852 3.1e-253 880.9 Nitrosomonadales hscA GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006807,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009266,GO:0009408,GO:0009409,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010467,GO:0010556,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0022607,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043531,GO:0043933,GO:0044085,GO:0044183,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051604,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0070417,GO:0070887,GO:0071310,GO:0071704,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:0097428,GO:0140110,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1903506,GO:1990230,GO:1990234,GO:2001141 ko:K04043,ko:K04044 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 1.A.33,1.A.33.1 Bacteria 1MVQI@1224,2KKJA@206350,2VHGV@28216,COG0443@1,COG0443@2 NA|NA|NA O Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB MAG.C3.5_01101 582744.Msip34_1853 3.8e-54 217.2 Nitrosomonadales fdx ko:K04755 ko00000 Bacteria 1RHDC@1224,2KMYK@206350,2VSQE@28216,COG0633@1,COG0633@2 NA|NA|NA C TIGRFAM ferredoxin, 2Fe-2S type, ISC system MAG.C3.5_01102 1236959.BAMT01000006_gene393 4.9e-85 322.0 Nitrosomonadales ko:K07221 ko00000,ko02000 1.B.5.1 Bacteria 1R6AZ@1224,2KMJX@206350,2VYMB@28216,COG3746@1,COG3746@2 NA|NA|NA P PFAM phosphate-selective porin O and P MAG.C3.5_01103 582744.Msip34_1857 1.8e-249 868.2 Nitrosomonadales lysS GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004824,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006430,GO:0006518,GO:0006520,GO:0006629,GO:0006644,GO:0006650,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009405,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019637,GO:0019752,GO:0030312,GO:0030322,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0040007,GO:0042221,GO:0042391,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046471,GO:0046483,GO:0046486,GO:0046677,GO:0046872,GO:0050896,GO:0051704,GO:0065007,GO:0065008,GO:0071704,GO:0071944,GO:0090304,GO:0090407,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.6 ko:K04567 ko00970,map00970 M00359,M00360 R03658 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iAF1260.b4129,iECDH1ME8569_1439.ECDH1ME8569_3989,iECW_1372.ECW_m4490,iEcDH1_1363.EcDH1_3862,iJN678.lysS,iJO1366.b4129,iWFL_1372.ECW_m4490 Bacteria 1MX1V@1224,2KMH7@206350,2VH1A@28216,COG1190@1,COG1190@2 NA|NA|NA J Belongs to the class-II aminoacyl-tRNA synthetase family MAG.C3.5_01104 1132855.KB913035_gene954 1.5e-150 538.9 Nitrosomonadales prfB GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02836 ko00000,ko03012 Bacteria 1MUAW@1224,2KMIT@206350,2VJ6C@28216,COG1186@1,COG1186@2 NA|NA|NA J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA MAG.C3.5_01105 1101195.Meth11DRAFT_1895 2.1e-153 548.5 Nitrosomonadales pstS GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0015698,GO:0016020,GO:0042301,GO:0043167,GO:0043168,GO:0044464,GO:0051179,GO:0051234,GO:0071944 ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 M00222 ko00000,ko00001,ko00002,ko02000 3.A.1.7 Bacteria 1MUH9@1224,2KMCK@206350,2VKAU@28216,COG0226@1,COG0226@2 NA|NA|NA P TIGRFAM phosphate binding protein MAG.C3.5_01106 582744.Msip34_1860 1.2e-142 512.7 Nitrosomonadales pstC ko:K02037,ko:K02038 ko02010,map02010 M00222 ko00000,ko00001,ko00002,ko02000 3.A.1.7 Bacteria 1MVKP@1224,2KKVV@206350,2VH4G@28216,COG0573@1,COG0573@2 NA|NA|NA P probably responsible for the translocation of the substrate across the membrane MAG.C3.5_01107 582744.Msip34_1861 2.3e-149 535.0 Nitrosomonadales pstA ko:K02038 ko02010,map02010 M00222 ko00000,ko00001,ko00002,ko02000 3.A.1.7 Bacteria 1MUWB@1224,2KKYY@206350,2VH6Y@28216,COG0581@1,COG0581@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component MAG.C3.5_01108 1165096.ARWF01000001_gene815 5.9e-135 486.9 Nitrosomonadales pstB 3.6.3.27 ko:K02036 ko02010,map02010 M00222 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.7 Bacteria 1MU16@1224,2KKPQ@206350,2VI4J@28216,COG1117@1,COG1117@2 NA|NA|NA P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system MAG.C3.5_01109 1163617.SCD_n02805 6.4e-213 746.9 Betaproteobacteria 3.1.3.1 ko:K01077 ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020 M00126 R02135,R04620 RC00017 ko00000,ko00001,ko00002,ko00537,ko01000,ko04147 Bacteria 1MXI2@1224,2VKXB@28216,COG1785@1,COG1785@2 NA|NA|NA P Belongs to the alkaline phosphatase family MAG.C3.5_01110 1163617.SCD_n02806 3.5e-54 218.4 Betaproteobacteria Bacteria 1ND0P@1224,2E94M@1,2VWRM@28216,333DG@2 NA|NA|NA MAG.C3.5_01111 1395571.TMS3_0118290 1.2e-35 156.8 Gammaproteobacteria xcmX Bacteria 1MZ5I@1224,1SBEY@1236,COG2165@1,COG2165@2 NA|NA|NA NU Type II secretory pathway pseudopilin MAG.C3.5_01112 1123368.AUIS01000016_gene2544 8.7e-31 139.8 Gammaproteobacteria oxpG ko:K02456 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1N1QJ@1224,1S8T4@1236,COG2165@1,COG2165@2 NA|NA|NA U Type II secretion system protein G MAG.C3.5_01113 1123393.KB891329_gene1064 1.5e-43 182.6 Hydrogenophilales ko:K02456 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1KSIT@119069,1QVCD@1224,2WGQ3@28216,COG4968@1,COG4968@2 NA|NA|NA NU Pfam:N_methyl_2 MAG.C3.5_01114 1095769.CAHF01000022_gene428 1.4e-121 443.7 Oxalobacteraceae pulQ ko:K02453 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1QUY7@1224,2VJ8Z@28216,472RY@75682,COG4796@1,COG4796@2 NA|NA|NA U Secretin and TonB N terminus short domain MAG.C3.5_01115 883126.HMPREF9710_03910 1e-10 73.6 Oxalobacteraceae Bacteria 1N89J@1224,2E5FR@1,2VVS4@28216,3307F@2,477AQ@75682 NA|NA|NA MAG.C3.5_01116 666681.M301_0729 2.2e-11 75.9 Nitrosomonadales pilO ko:K02664,ko:K02665,ko:K12280 ko00000,ko02035,ko02044 Bacteria 1PIST@1224,2KNCJ@206350,2W61Q@28216,COG3167@1,COG3167@2 NA|NA|NA NU carbon utilization MAG.C3.5_01117 1131553.JIBI01000005_gene2180 7.2e-07 60.8 Nitrosomonadales Bacteria 1NA23@1224,2E3Q5@1,2VVXW@28216,32YN4@2,3736Z@32003 NA|NA|NA MAG.C3.5_01119 1387312.BAUS01000002_gene574 3.4e-234 817.4 Nitrosomonadales alaS GO:0001130,GO:0001131,GO:0001141,GO:0001217,GO:0002161,GO:0002196,GO:0003674,GO:0003700,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006355,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009451,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0016597,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0052689,GO:0060255,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:0140110,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 6.1.1.7 ko:K01872 ko00970,map00970 M00359,M00360 R03038 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iECABU_c1320.ECABU_c29670,iECED1_1282.ECED1_3146,iEcHS_1320.EcHS_A2833,iJN746.PP_4474 Bacteria 1MU9A@1224,2KMGG@206350,2VH6Z@28216,COG0013@1,COG0013@2 NA|NA|NA J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain MAG.C3.5_01121 582744.Msip34_0873 1.1e-38 166.0 Nitrosomonadales MA20_41450 Bacteria 1N083@1224,2KN4D@206350,2VUF2@28216,COG3737@1,COG3737@2 NA|NA|NA S Protein of unknown function (DUF498/DUF598) MAG.C3.5_01122 1101195.Meth11DRAFT_0933 1.3e-200 705.7 Nitrosomonadales fabB GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.41 ko:K00647 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119 RC00039,RC02728,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 iAF1260.b2323,iAPECO1_1312.APECO1_4241,iB21_1397.B21_02208,iBWG_1329.BWG_2097,iE2348C_1286.E2348C_2463,iEC042_1314.EC042_2564,iEC55989_1330.EC55989_2567,iECABU_c1320.ECABU_c26560,iECBD_1354.ECBD_1336,iECB_1328.ECB_02248,iECDH10B_1368.ECDH10B_2485,iECDH1ME8569_1439.ECDH1ME8569_2261,iECD_1391.ECD_02248,iECED1_1282.ECED1_2787,iECIAI1_1343.ECIAI1_2400,iECIAI39_1322.ECIAI39_2472,iECNA114_1301.ECNA114_2414,iECO103_1326.ECO103_2787,iECO111_1330.ECO111_3071,iECO26_1355.ECO26_3311,iECOK1_1307.ECOK1_2605,iECP_1309.ECP_2362,iECS88_1305.ECS88_2471,iECSE_1348.ECSE_2632,iECSF_1327.ECSF_2200,iECUMN_1333.ECUMN_2663,iECW_1372.ECW_m2512,iEKO11_1354.EKO11_1442,iETEC_1333.ETEC_2459,iEcDH1_1363.EcDH1_1333,iEcHS_1320.EcHS_A2474,iEcSMS35_1347.EcSMS35_2480,iEcolC_1368.EcolC_1329,iJO1366.b2323,iJR904.b2323,iLF82_1304.LF82_0605,iNRG857_1313.NRG857_11765,iSBO_1134.SBO_2360,iUMN146_1321.UM146_05195,iUTI89_1310.UTI89_C2608,iWFL_1372.ECW_m2512,iY75_1357.Y75_RS12180,ic_1306.c2869 Bacteria 1MU1X@1224,2KKN1@206350,2VIWC@28216,COG0304@1,COG0304@2 NA|NA|NA IQ Belongs to the beta-ketoacyl-ACP synthases family MAG.C3.5_01123 1101195.Meth11DRAFT_0932 1.2e-88 332.4 Nitrosomonadales fabA GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0008693,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016860,GO:0016863,GO:0019171,GO:0019752,GO:0032787,GO:0034017,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0047451,GO:0071704,GO:0072330,GO:1901576 4.2.1.59,5.3.3.14 ko:K01716 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00083 R04428,R04535,R04537,R04544,R04568,R04954,R04965,R07639 RC00831,RC01078,RC01095 ko00000,ko00001,ko00002,ko01000,ko01004 iAF1260.b0954,iB21_1397.B21_00965,iBWG_1329.BWG_0806,iE2348C_1286.E2348C_0940,iEC042_1314.EC042_1039,iECBD_1354.ECBD_2641,iECB_1328.ECB_00958,iECDH10B_1368.ECDH10B_1024,iECD_1391.ECD_00958,iECED1_1282.ECED1_0977,iECH74115_1262.ECH74115_1118,iECIAI1_1343.ECIAI1_0995,iECIAI39_1322.ECIAI39_2193,iECNA114_1301.ECNA114_1032,iECO103_1326.ECO103_1000,iECO111_1330.ECO111_1022,iECO26_1355.ECO26_1081,iECOK1_1307.ECOK1_1013,iECS88_1305.ECS88_0975,iECSF_1327.ECSF_0868,iECSP_1301.ECSP_1060,iECUMN_1333.ECUMN_1143,iECW_1372.ECW_m1064,iECs_1301.ECs1038,iEKO11_1354.EKO11_2876,iETEC_1333.ETEC_1024,iEcE24377_1341.EcE24377A_1068,iEcHS_1320.EcHS_A1063,iEcSMS35_1347.EcSMS35_2166,iEcolC_1368.EcolC_2642,iG2583_1286.G2583_1189,iJO1366.b0954,iJR904.b0954,iLF82_1304.LF82_0604,iSBO_1134.SBO_2277,iSDY_1059.SDY_0927,iSF_1195.SF0954,iSSON_1240.SSON_0958,iSbBS512_1146.SbBS512_E2362,iUMNK88_1353.UMNK88_1108,iWFL_1372.ECW_m1064,iY75_1357.Y75_RS04955,iZ_1308.Z1304,ic_1306.c1090 Bacteria 1MWV8@1224,2KM1Q@206350,2VQ71@28216,COG0764@1,COG0764@2 NA|NA|NA I Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16 0, being most active on intermediate chain length MAG.C3.5_01124 1502770.JQMG01000001_gene1655 8.8e-163 579.7 Nitrosomonadales Bacteria 1MUCP@1224,2KM2B@206350,2VN99@28216,COG0714@1,COG0714@2 NA|NA|NA S PFAM ATPase associated with various cellular activities, AAA_3 MAG.C3.5_01125 1165096.ARWF01000001_gene671 6.4e-114 417.2 Nitrosomonadales mxaS Bacteria 1R69F@1224,2KMFM@206350,2VSZ0@28216,COG1721@1,COG1721@2 NA|NA|NA S Protein of unknown function DUF58 MAG.C3.5_01126 1165096.ARWF01000001_gene672 3.5e-84 318.5 Nitrosomonadales ko:K16256 ko00680,ko01120,map00680,map01120 ko00000,ko00001 Bacteria 1N4P1@1224,2DKVR@1,2KP3S@206350,2W37P@28216,30HS7@2 NA|NA|NA MAG.C3.5_01127 1165096.ARWF01000001_gene673 5.2e-136 490.7 Nitrosomonadales ko:K07114,ko:K16257 ko00680,ko01120,map00680,map01120 ko00000,ko00001,ko02000 1.A.13.2.2,1.A.13.2.3 Bacteria 1PRHK@1224,2KKMS@206350,2VS8H@28216,COG2304@1,COG2304@2 NA|NA|NA S von Willebrand factor, type A MAG.C3.5_01128 1101195.Meth11DRAFT_0927 4e-61 241.1 Nitrosomonadales ko:K16258 ko00680,ko01120,map00680,map01120 ko00000,ko00001 Bacteria 1N2K3@1224,2CEMN@1,2KMTM@206350,2VU8M@28216,32S03@2 NA|NA|NA MAG.C3.5_01129 1101195.Meth11DRAFT_0926 4.4e-130 471.1 Nitrosomonadales ko:K16259 ko00680,ko01120,map00680,map01120 ko00000,ko00001 Bacteria 1MX8R@1224,2KMFJ@206350,2VPW9@28216,COG2304@1,COG2304@2 NA|NA|NA S von Willebrand factor (vWF) type A domain MAG.C3.5_01130 261292.Nit79A3_1290 7.1e-09 67.0 Nitrosomonadales ko:K19168 ko00000,ko02048 Bacteria 1QVBF@1224,2DTQ5@1,2WGXY@28216,33M9A@2,373GX@32003 NA|NA|NA MAG.C3.5_01131 265072.Mfla_1904 1.4e-107 396.4 Nitrosomonadales ygfZ ko:K06980,ko:K22073 ko00000,ko01000,ko03016,ko03029 Bacteria 1N852@1224,2KKIN@206350,2VK2D@28216,COG0354@1,COG0354@2 NA|NA|NA S Belongs to the GcvT family MAG.C3.5_01133 1198452.Jab_1c25620 1.8e-80 305.8 Oxalobacteraceae ko:K08309 ko00000,ko01000,ko01011 GH23 Bacteria 1R577@1224,2VRNQ@28216,4773C@75682,COG4700@1,COG4700@2 NA|NA|NA S protein conserved in bacteria containing a divergent form of TPR repeats MAG.C3.5_01134 582744.Msip34_2137 1.6e-87 329.3 Nitrosomonadales fixH Bacteria 1N6AR@1224,2KNHT@206350,2VU84@28216,COG5456@1,COG5456@2 NA|NA|NA P YtkA-like MAG.C3.5_01135 582744.Msip34_2136 5e-302 1043.5 Nitrosomonadales fixI GO:0003674,GO:0003824,GO:0005215,GO:0005388,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0008150,GO:0008324,GO:0015075,GO:0015085,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0070588,GO:0070838,GO:0071944,GO:0072511,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.4,3.6.3.54 ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 R00086 RC00002 ko00000,ko00001,ko01000 3.A.3.5 Bacteria 1MU08@1224,2KM5C@206350,2VJSM@28216,COG2217@1,COG2217@2,COG2608@1,COG2608@2 NA|NA|NA P ATPase, P-type (transporting), HAD superfamily, subfamily IC MAG.C3.5_01136 582744.Msip34_2135 9.5e-67 259.6 Nitrosomonadales bfrA 1.16.3.1 ko:K03594 ko00860,map00860 R00078 RC02758 ko00000,ko00001,ko01000 Bacteria 1RD4Y@1224,2KMN1@206350,2VQG7@28216,COG2193@1,COG2193@2 NA|NA|NA P Ferritin-like domain MAG.C3.5_01137 582744.Msip34_2134 2.9e-76 291.2 Nitrosomonadales bfr 1.16.3.1 ko:K03594 ko00860,map00860 R00078 RC02758 ko00000,ko00001,ko01000 Bacteria 1RCW7@1224,2KMPX@206350,2VPZP@28216,COG2193@1,COG2193@2 NA|NA|NA P Ferritin-like domain MAG.C3.5_01138 265072.Mfla_0633 1.2e-202 712.6 Nitrosomonadales ccoG GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 Bacteria 1MVFY@1224,2KM2J@206350,2VHRH@28216,COG0348@1,COG0348@2 NA|NA|NA C TIGRFAM cytochrome c oxidase accessory protein MAG.C3.5_01139 582744.Msip34_2139 8.7e-149 533.1 Nitrosomonadales ccoP ko:K00406 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00156 ko00000,ko00001,ko00002 3.D.4.3 Bacteria 1MUCW@1224,2KMD1@206350,2VHGS@28216,COG2010@1,COG2010@2 NA|NA|NA C C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex MAG.C3.5_01140 1236959.BAMT01000004_gene800 7.4e-17 92.4 Nitrosomonadales Bacteria 1NJW1@1224,2EHQ5@1,2KP0N@206350,2VXSI@28216,33BFX@2 NA|NA|NA S Cbb3-type cytochrome oxidase component FixQ MAG.C3.5_01141 582744.Msip34_2141 3.1e-125 454.5 Nitrosomonadales ccoO 1.9.3.1 ko:K00405,ko:K15862 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00156 ko00000,ko00001,ko00002,ko01000 3.D.4.3 iIT341.HP0145 Bacteria 1MXEY@1224,2KMM8@206350,2VIJ2@28216,COG2993@1,COG2993@2 NA|NA|NA C PFAM cytochrome C oxidase mono-heme subunit FixO MAG.C3.5_01142 582744.Msip34_2142 5.8e-261 906.4 Nitrosomonadales ccoN GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0022900,GO:0022904,GO:0034220,GO:0044237,GO:0044464,GO:0045333,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 1.9.3.1 ko:K00404,ko:K15862 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00156 ko00000,ko00001,ko00002,ko01000 3.D.4.3 iIT341.HP0144 Bacteria 1MU18@1224,2KKTV@206350,2VIWB@28216,COG3278@1,COG3278@2 NA|NA|NA C TIGRFAM cytochrome c oxidase, cbb3-type, subunit I MAG.C3.5_01143 1122236.KB905149_gene2223 3.5e-63 248.1 Nitrosomonadales hyaE GO:0003674,GO:0005048,GO:0005488,GO:0033218,GO:0042277 ko:K03619,ko:K07152 ko00000,ko03029 Bacteria 1RHJ8@1224,2KMU7@206350,2VR3M@28216,COG1999@1,COG1999@2 NA|NA|NA S PFAM electron transport protein SCO1 SenC MAG.C3.5_01144 1122236.KB905145_gene2502 4.7e-108 398.7 Nitrosomonadales Bacteria 1MWEC@1224,2KNWM@206350,2VJXF@28216,COG2831@1,COG2831@2 NA|NA|NA U Haemolysin secretion/activation protein ShlB/FhaC/HecB MAG.C3.5_01149 582744.Msip34_1886 2.3e-08 65.1 Betaproteobacteria Bacteria 1RJ1B@1224,2VTGM@28216,COG5581@1,COG5581@2 NA|NA|NA M type IV pilus assembly PilZ MAG.C3.5_01150 582744.Msip34_1887 1e-161 576.2 Nitrosomonadales hemH GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 ko:K01772 ko00860,ko01100,ko01110,map00860,map01100,map01110 M00121 R00310,R11329 RC01012 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVR1@1224,2KKWT@206350,2VH7Z@28216,COG0276@1,COG0276@2 NA|NA|NA H Catalyzes the ferrous insertion into protoporphyrin IX MAG.C3.5_01151 582744.Msip34_1888 3.6e-145 521.2 Nitrosomonadales hldD 5.1.3.20 ko:K03274 ko00540,ko01100,map00540,map01100 M00064 R05176 RC01291 ko00000,ko00001,ko00002,ko01000,ko01005 Bacteria 1MVE4@1224,2KKPF@206350,2VH69@28216,COG0451@1,COG0451@2 NA|NA|NA GM Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose MAG.C3.5_01152 582744.Msip34_1889 6.5e-75 287.0 Nitrosomonadales gmhA 5.3.1.28 ko:K03271 ko00540,ko01100,map00540,map01100 M00064 R05645,R09768,R09769 RC00434 ko00000,ko00001,ko00002,ko01000,ko01005 Bacteria 1NJ8X@1224,2KMGZ@206350,2VN12@28216,COG0279@1,COG0279@2 NA|NA|NA G Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate MAG.C3.5_01154 666681.M301_2218 0.0 1903.3 Nitrosomonadales uca 6.3.4.14,6.3.4.6,6.4.1.1,6.4.1.2 ko:K01941,ko:K01959,ko:K01961 ko00020,ko00061,ko00220,ko00620,ko00640,ko00720,ko00791,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko01230,map00020,map00061,map00220,map00620,map00640,map00720,map00791,map01100,map01110,map01120,map01130,map01200,map01212,map01230 M00082,M00173,M00376,M00620 R00344,R00742,R00774,R04385 RC00040,RC00253,RC00367,RC00378 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU4H@1224,2KNIP@206350,2WGI2@28216,COG0439@1,COG0439@2,COG1984@1,COG1984@2,COG2049@1,COG2049@2 NA|NA|NA C Carbamoyl-phosphate synthetase large chain domain protein MAG.C3.5_01155 582744.Msip34_0942 6e-74 283.5 Nitrosomonadales wlaX ko:K07501 ko00000 Bacteria 1MVZJ@1224,2KKD0@206350,2VISP@28216,COG3298@1,COG3298@2 NA|NA|NA L Predicted 3'-5' exonuclease related to the exonuclease domain of PolB MAG.C3.5_01156 338969.Rfer_1828 2.4e-46 192.2 Comamonadaceae lonD 3.4.21.53 ko:K01338,ko:K07157 ko04112,map04112 ko00000,ko00001,ko01000,ko01002 Bacteria 1RFYH@1224,2VSA4@28216,4ADGM@80864,COG2802@1,COG2802@2 NA|NA|NA S PFAM peptidase S16 lon domain protein MAG.C3.5_01157 666681.M301_0991 2.1e-92 345.9 Nitrosomonadales 3.4.21.107 ko:K04771 ko01503,ko02020,map01503,map02020 M00728 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 Bacteria 1NERQ@1224,2KKSV@206350,2W0JI@28216,COG0265@1,COG0265@2 NA|NA|NA O Trypsin-like peptidase domain MAG.C3.5_01158 666681.M301_2225 1.3e-155 555.8 Nitrosomonadales tauA ko:K02051 M00188 ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 Bacteria 1MVJA@1224,2KMIR@206350,2VNH6@28216,COG0715@1,COG0715@2 NA|NA|NA P NMT1-like family MAG.C3.5_01159 666681.M301_2224 1.1e-154 552.7 Nitrosomonadales ko:K02050 M00188 ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 Bacteria 1MWDJ@1224,2KM22@206350,2VMK8@28216,COG0600@1,COG0600@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component MAG.C3.5_01160 666681.M301_2223 1.2e-139 502.7 Nitrosomonadales ko:K02049 M00188 ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 Bacteria 1MUDV@1224,2KKED@206350,2VMYS@28216,COG1116@1,COG1116@2 NA|NA|NA P ABC transporter MAG.C3.5_01162 1485544.JQKP01000001_gene898 6.6e-198 696.8 Nitrosomonadales glnT 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 Bacteria 1MUGQ@1224,2VJ0X@28216,44WCI@713636,COG0174@1,COG0174@2 NA|NA|NA E Glutamine synthetase, catalytic domain MAG.C3.5_01163 582744.Msip34_0951 4.9e-115 420.6 Nitrosomonadales IV02_09290 ko:K09967 ko00000 Bacteria 1N2KR@1224,2KNG0@206350,2VKVN@28216,COG3665@1,COG3665@2 NA|NA|NA S TIGRFAM urea carboxylase-associated protein 2 MAG.C3.5_01164 323850.Shew_1261 0.0 1454.1 Gammaproteobacteria 3.1.21.5 ko:K01156 ko00000,ko01000,ko02048 Bacteria 1QJX4@1224,1RYVR@1236,COG1061@1,COG1061@2 NA|NA|NA KL type III restriction enzyme, res subunit MAG.C3.5_01165 502347.ESCAB7627_0695 6.5e-277 959.9 Escherichia 2.1.1.72 ko:K07316 ko00000,ko01000,ko02048 Bacteria 1PCSG@1224,1TBY3@1236,3XRBA@561,COG2189@1,COG2189@2 NA|NA|NA L DNA methylase MAG.C3.5_01166 1101195.Meth11DRAFT_0003 7e-60 236.5 Nitrosomonadales gyrB GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009330,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032991,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0140097,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 ko:K02470 ko00000,ko01000,ko03032,ko03400 Bacteria 1MVKT@1224,2KKEJ@206350,2VI8N@28216,COG0187@1,COG0187@2 NA|NA|NA L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner MAG.C3.5_01167 582744.Msip34_0380 2.9e-208 731.1 Nitrosomonadales purD GO:0000166,GO:0003674,GO:0003824,GO:0004637,GO:0005488,GO:0005524,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.4.13 ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04144 RC00090,RC00166 ko00000,ko00001,ko00002,ko01000 iECNA114_1301.ECNA114_3417,iECSF_1327.ECSF_3859,iJN746.PP_4823,iPC815.YPO3729 Bacteria 1MUAH@1224,2KKHI@206350,2VH9J@28216,COG0151@1,COG0151@2 NA|NA|NA F Belongs to the GARS family MAG.C3.5_01168 582744.Msip34_0381 4.1e-268 930.2 Nitrosomonadales purH GO:0003674,GO:0003824,GO:0004643,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.2.3,3.5.4.10 ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 M00048 R01127,R04560 RC00026,RC00263,RC00456 ko00000,ko00001,ko00002,ko01000,ko04147 iEcHS_1320.EcHS_A4240,iPC815.YPO3728 Bacteria 1MUDQ@1224,2KKHT@206350,2VJPX@28216,COG0138@1,COG0138@2 NA|NA|NA F TIGRFAM phosphoribosylaminoimidazolecarboxamide formyltransferase IMP cyclohydrolase MAG.C3.5_01169 265072.Mfla_0350 1e-26 125.6 Nitrosomonadales fis GO:0000018,GO:0000229,GO:0000785,GO:0000786,GO:0000787,GO:0000789,GO:0000976,GO:0000984,GO:0000985,GO:0001017,GO:0001046,GO:0001047,GO:0001067,GO:0001121,GO:0001130,GO:0001131,GO:0001140,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008301,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016032,GO:0016070,GO:0018130,GO:0019042,GO:0019045,GO:0019046,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031421,GO:0032359,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044374,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044444,GO:0044446,GO:0044464,GO:0044815,GO:0045892,GO:0045893,GO:0045911,GO:0045934,GO:0045935,GO:0046483,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051704,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 ko:K03557,ko:K07712 ko02020,ko05111,map02020,map05111 M00497 ko00000,ko00001,ko00002,ko02022,ko03000,ko03036,ko03400 Bacteria 1N7MJ@1224,2KNBI@206350,2VVQK@28216,COG2901@1,COG2901@2 NA|NA|NA K Bacterial regulatory protein, Fis family MAG.C3.5_01170 582744.Msip34_0815 4.2e-84 318.2 Nitrosomonadales ko:K03406 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko02035 Bacteria 1MU9B@1224,2KKQK@206350,2VGZ8@28216,COG0840@1,COG0840@2 NA|NA|NA NT PFAM chemotaxis sensory transducer MAG.C3.5_01171 1236959.BAMT01000005_gene224 2.1e-100 372.5 Nitrosomonadales Bacteria 1RHDT@1224,2KKD2@206350,2VTTP@28216,COG3137@1,COG3137@2 NA|NA|NA M Protein of unknown function, DUF481 MAG.C3.5_01172 1095769.CAHF01000006_gene1949 3.4e-44 184.9 Betaproteobacteria Bacteria 1RH4S@1224,2VRI3@28216,COG2258@1,COG2258@2 NA|NA|NA S MOSC domain MAG.C3.5_01173 395494.Galf_0056 4.6e-22 110.5 Betaproteobacteria Bacteria 1N6VS@1224,2C84F@1,2VWHA@28216,334ZR@2 NA|NA|NA MAG.C3.5_01174 314278.NB231_09368 5.1e-17 95.5 Gammaproteobacteria 3.1.3.3,4.6.1.1 ko:K01768,ko:K07315,ko:K20977 ko00230,ko02020,ko02025,ko04113,ko04213,map00230,map02020,map02025,map04113,map04213 M00695,M00820 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000,ko02022,ko03021 Bacteria 1MV1V@1224,1RYBQ@1236,COG2114@1,COG2114@2,COG3437@1,COG3437@2 NA|NA|NA T COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) MAG.C3.5_01175 582744.Msip34_2741 1.3e-11 77.0 Nitrosomonadales ko:K07126 ko00000 Bacteria 1MWPA@1224,2KNAX@206350,2VM3A@28216,COG0790@1,COG0790@2 NA|NA|NA S Sel1-like repeats. MAG.C3.5_01176 582744.Msip34_2726 1e-128 466.5 Nitrosomonadales Bacteria 1MUDK@1224,2KN50@206350,2WF3J@28216,COG4977@1,COG4977@2 NA|NA|NA K helix-turn-helix- domain containing protein, AraC type MAG.C3.5_01177 582744.Msip34_2725 1.6e-95 355.9 Nitrosomonadales ko:K07124 ko00000 Bacteria 1MWNZ@1224,2KMAG@206350,2VPX6@28216,COG0300@1,COG0300@2 NA|NA|NA S Belongs to the short-chain dehydrogenases reductases (SDR) family MAG.C3.5_01178 666681.M301_2689 1e-10 72.4 Nitrosomonadales Bacteria 1NGBT@1224,2EH60@1,2KND7@206350,2W81Z@28216,33AXW@2 NA|NA|NA S Protein of unknown function (DUF2798) MAG.C3.5_01179 1132855.KB913035_gene76 1.8e-45 188.3 Nitrosomonadales ko:K06995 ko00000 Bacteria 1N8CD@1224,2KN1D@206350,2W7ZV@28216,COG3450@1,COG3450@2 NA|NA|NA S Protein of unknown function (DUF861) MAG.C3.5_01180 1198232.CYCME_1828 1.9e-28 132.5 Thiotrichales ybeL 1.17.4.1,4.6.1.1 ko:K00525,ko:K01768 ko00230,ko00240,ko01100,ko02025,ko04113,ko04213,map00230,map00240,map01100,map02025,map04113,map04213 M00053,M00695 R00089,R00434,R02017,R02018,R02019,R02024 RC00295,RC00613 ko00000,ko00001,ko00002,ko01000,ko03400 Bacteria 1P9T7@1224,1RYIB@1236,460Y8@72273,COG2888@1,COG2888@2 NA|NA|NA J Zinc-ribbon containing domain MAG.C3.5_01181 1132855.KB913035_gene79 3.9e-83 315.1 Nitrosomonadales Bacteria 1PJNT@1224,2BUPG@1,2KNHN@206350,2W82M@28216,32Q0G@2 NA|NA|NA MAG.C3.5_01182 1387312.BAUS01000004_gene1692 3.3e-45 187.6 Nitrosomonadales yneG Bacteria 1RGW8@1224,2DMJC@1,2KMYS@206350,2VVIM@28216,32RYJ@2 NA|NA|NA S Domain of unknown function (DUF4186) MAG.C3.5_01183 420662.Mpe_A1369 7.8e-94 350.5 unclassified Burkholderiales yedI GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K09781 ko00000 Bacteria 1KJK3@119065,1MVYU@1224,2VHTU@28216,COG2354@1,COG2354@2 NA|NA|NA S Protein of unknown function (DUF808) MAG.C3.5_01184 582744.Msip34_2477 1.1e-87 330.1 Nitrosomonadales ko:K18900 M00698 ko00000,ko00002,ko01504,ko03000 Bacteria 1MV06@1224,2KKMP@206350,2VHGD@28216,COG0583@1,COG0583@2 NA|NA|NA K LysR substrate binding domain MAG.C3.5_01185 163908.KB235896_gene4833 5.6e-90 337.4 Nostocales Bacteria 1G604@1117,1HMRT@1161,COG1028@1,COG1028@2 NA|NA|NA IQ Enoyl-(Acyl carrier protein) reductase MAG.C3.5_01187 1366050.N234_11210 4.8e-104 384.4 Burkholderiaceae crgA Bacteria 1K0MI@119060,1MU7H@1224,2VISY@28216,COG0583@1,COG0583@2 NA|NA|NA K LysR family MAG.C3.5_01188 582744.Msip34_1415 8.2e-92 343.6 Nitrosomonadales Bacteria 1MUWC@1224,2KNHY@206350,2VK5Z@28216,COG1028@1,COG1028@2 NA|NA|NA IQ KR domain MAG.C3.5_01189 265072.Mfla_2609 5.1e-46 191.0 Nitrosomonadales scrK 2.7.1.4 ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 R00760,R00867,R03920 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 1PCFU@1224,2KMJK@206350,2VK5G@28216,COG0524@1,COG0524@2 NA|NA|NA G pfkB family carbohydrate kinase MAG.C3.5_01192 582744.Msip34_2528 9.6e-91 339.7 Nitrosomonadales pyrE GO:0000287,GO:0003674,GO:0003824,GO:0004588,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.10 ko:K00762 ko00240,ko01100,map00240,map01100 M00051 R01870 RC00611 ko00000,ko00001,ko00002,ko01000 iAPECO1_1312.APECO1_2819,iECIAI39_1322.ECIAI39_4161,iEcSMS35_1347.EcSMS35_3977,iUTI89_1310.UTI89_C4186 Bacteria 1MW6F@1224,2KM5T@206350,2VH9U@28216,COG0461@1,COG0461@2 NA|NA|NA F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) MAG.C3.5_01193 582744.Msip34_2527 7.3e-125 453.4 Nitrosomonadales exoA 3.1.11.2 ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1MVII@1224,2KKGT@206350,2VI74@28216,COG0708@1,COG0708@2 NA|NA|NA L PFAM Endonuclease Exonuclease phosphatase MAG.C3.5_01194 857087.Metme_0997 3.3e-83 316.2 Gammaproteobacteria Bacteria 1R7HC@1224,1RXC9@1236,COG2199@1,COG2202@1,COG2202@2,COG3706@2 NA|NA|NA T PAS fold MAG.C3.5_01195 666681.M301_2592 1.6e-55 223.0 Nitrosomonadales Bacteria 1MW6R@1224,2KMZR@206350,2VSC6@28216,COG5429@1,COG5429@2 NA|NA|NA S Protein of unknown function (DUF1223) MAG.C3.5_01196 582744.Msip34_2526 5e-192 677.2 Nitrosomonadales ampG GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015672,GO:0015835,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1901264,GO:1902600 ko:K08218 ko01501,map01501 M00628 ko00000,ko00001,ko00002,ko02000 2.A.1.25 Bacteria 1MUZ8@1224,2KM19@206350,2VI8P@28216,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily MAG.C3.5_01197 582744.Msip34_2525 6.9e-84 317.0 Nitrosomonadales braZ ko:K09792 ko00000 Bacteria 1RIGJ@1224,2KP5N@206350,2VINE@28216,COG2836@1,COG2836@2 NA|NA|NA S Cytochrome C biogenesis protein transmembrane region MAG.C3.5_01198 666681.M301_2590 2.2e-79 302.0 Nitrosomonadales metW 2.3.1.31 ko:K00641 ko00270,ko01100,ko01130,map00270,map01100,map01130 R01776 RC00004,RC00041 ko00000,ko00001,ko01000 Bacteria 1MVSY@1224,2KKRF@206350,2VMPA@28216,COG0500@1,COG2226@2 NA|NA|NA Q TIGRFAM methionine biosynthesis protein MetW MAG.C3.5_01199 1502770.JQMG01000001_gene724 8.8e-188 662.9 Nitrosomonadales metX GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 ko:K00641 ko00270,ko01100,ko01130,map00270,map01100,map01130 R01776 RC00004,RC00041 ko00000,ko00001,ko01000 Bacteria 1MVJV@1224,2KKVG@206350,2VHU9@28216,COG2021@1,COG2021@2 NA|NA|NA E Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine MAG.C3.5_01200 582744.Msip34_2522 3e-72 278.1 Nitrosomonadales yrdA GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008270,GO:0009987,GO:0016043,GO:0022607,GO:0042802,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071840 ko:K08699 ko00000 Bacteria 1RD76@1224,2KMKC@206350,2VR65@28216,COG0663@1,COG0663@2 NA|NA|NA S Bacterial transferase hexapeptide (six repeats) MAG.C3.5_01201 522306.CAP2UW1_2728 9.6e-55 219.9 unclassified Betaproteobacteria pagP GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009279,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016409,GO:0016416,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044462,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.251 ko:K12973 ko01503,ko05133,map01503,map05133 M00724 R11223 RC00037,RC00041 ko00000,ko00001,ko00002,ko01000,ko01005 iEC042_1314.EC042_0658,iECO111_1330.ECO111_0653,iECSE_1348.ECSE_0690,iEcolC_1368.EcolC_3022 Bacteria 1KQWM@119066,1Q75P@1224,2C256@1,2VUK3@28216,2Z7SY@2 NA|NA|NA M Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors MAG.C3.5_01202 1165096.ARWF01000001_gene1811 1e-87 330.1 Nitrosomonadales prmC GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006464,GO:0006479,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010468,GO:0016043,GO:0016740,GO:0016741,GO:0018364,GO:0019222,GO:0019538,GO:0022411,GO:0032259,GO:0032984,GO:0034641,GO:0034645,GO:0036009,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043414,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.1.1.297 ko:K02493,ko:K02835 R10806 RC00003,RC03279 ko00000,ko01000,ko03012 Bacteria 1MXCQ@1224,2KM69@206350,2VP72@28216,COG2890@1,COG2890@2 NA|NA|NA J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif MAG.C3.5_01203 582744.Msip34_2518 2.7e-186 657.9 Nitrosomonadales prfA GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02835,ko:K15034 ko00000,ko03012 Bacteria 1MV28@1224,2KMB9@206350,2VJKV@28216,COG0216@1,COG0216@2 NA|NA|NA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA MAG.C3.5_01204 582744.Msip34_2517 1.7e-192 678.7 Nitrosomonadales hemA GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006082,GO:0006520,GO:0006536,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008883,GO:0009058,GO:0009064,GO:0009288,GO:0009987,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019353,GO:0019438,GO:0019752,GO:0033013,GO:0033014,GO:0033526,GO:0034641,GO:0042168,GO:0042440,GO:0042597,GO:0042802,GO:0042995,GO:0043226,GO:0043228,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0055040,GO:0055114,GO:0071704,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 1.2.1.70 ko:K02407,ko:K02492 ko00860,ko01100,ko01110,ko01120,ko02040,map00860,map01100,map01110,map01120,map02040 M00121 R04109 RC00055,RC00149 ko00000,ko00001,ko00002,ko01000,ko02035 iECNA114_1301.ECNA114_1375,iECSF_1327.ECSF_1186,iSB619.SA_RS08420,iUTI89_1310.UTI89_C1404 Bacteria 1MU41@1224,2KKTU@206350,2VHNC@28216,COG0373@1,COG0373@2 NA|NA|NA H Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) MAG.C3.5_01205 59538.XP_005976937.1 1.5e-116 425.6 Mammalia Mammalia 38G6J@33154,3BBFI@33208,3CTKR@33213,3JE6P@40674,48BUF@7711,490Q7@7742,COG0036@1,KOG3111@2759 NA|NA|NA G ribulose-phosphate 3-epimerase activity MAG.C3.5_01206 395494.Galf_2700 4.5e-23 114.4 Nitrosomonadales Bacteria 1PJX3@1224,2BUWK@1,2W88W@28216,32Q8Q@2,44WK2@713636 NA|NA|NA MAG.C3.5_01207 582744.Msip34_2515 4.9e-70 271.2 Nitrosomonadales gph GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008967,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0031404,GO:0033554,GO:0034641,GO:0042578,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.1.3.105,3.1.3.18 ko:K01091,ko:K22292 ko00520,ko00630,ko01100,ko01110,ko01130,map00520,map00630,map01100,map01110,map01130 R01334,R11785 RC00017 ko00000,ko00001,ko01000 iSBO_1134.SBO_3372,iSbBS512_1146.SbBS512_E3762,iYL1228.KPN_03756 Bacteria 1RDDY@1224,2KMQB@206350,2VIZ6@28216,COG0546@1,COG0546@2 NA|NA|NA G subfamily IA, variant 1 MAG.C3.5_01208 1502770.JQMG01000001_gene717 6.6e-231 806.6 Nitrosomonadales trpE 4.1.3.27 ko:K01657 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 M00023 R00985,R00986 RC00010,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 iJN746.PP_0417 Bacteria 1MVBJ@1224,2KKDB@206350,2VI2V@28216,COG0147@1,COG0147@2 NA|NA|NA E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia MAG.C3.5_01209 1101195.Meth11DRAFT_2509 5.5e-98 363.6 Nitrosomonadales trpG 2.6.1.85,4.1.3.27 ko:K01658,ko:K01664 ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025 M00023 R00985,R00986,R01716 RC00010,RC01418,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV5Y@1224,2KMC5@206350,2VHGQ@28216,COG0512@1,COG0512@2 NA|NA|NA EH TIGRFAM glutamine amidotransferase of anthranilate synthase MAG.C3.5_01210 582744.Msip34_1413 8.8e-89 333.6 Nitrosomonadales glnD GO:0003674,GO:0003824,GO:0006082,GO:0006355,GO:0006464,GO:0006520,GO:0006541,GO:0006542,GO:0006807,GO:0006808,GO:0007154,GO:0007584,GO:0008150,GO:0008152,GO:0008652,GO:0008773,GO:0009058,GO:0009064,GO:0009084,GO:0009605,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0018175,GO:0018177,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0045893,GO:0045935,GO:0046394,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070569,GO:0070887,GO:0071310,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0080090,GO:0090293,GO:0140096,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901698,GO:1901699,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 2.7.7.59 ko:K00990 ko02020,map02020 ko00000,ko00001,ko01000 Bacteria 1MV54@1224,2KM41@206350,2VI2G@28216,COG2844@1,COG2844@2 NA|NA|NA O Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen MAG.C3.5_01211 686340.Metal_0147 3.4e-122 446.0 Gammaproteobacteria Bacteria 1MU7T@1224,1S9I6@1236,COG2931@1,COG2931@2 NA|NA|NA Q COG2931, RTX toxins and related Ca2 -binding proteins MAG.C3.5_01213 1288826.MSNKSG1_11853 9.4e-184 649.8 Alteromonadaceae mqo GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0044424,GO:0044464,GO:0055114,GO:0071944 1.1.5.4 ko:K00116 ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map01100,map01110,map01120,map01130,map01200 M00009,M00011 R00360,R00361,R01257 RC00031 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUCC@1224,1RRBV@1236,46A2J@72275,COG0579@1,COG0579@2 NA|NA|NA C malate quinone oxidoreductase MAG.C3.5_01214 1101195.Meth11DRAFT_0506 1.4e-240 839.3 Nitrosomonadales Bacteria 1MU2C@1224,2KMBP@206350,2VH3V@28216,COG0715@1,COG0715@2,COG5001@1,COG5001@2 NA|NA|NA T PFAM EAL domain MAG.C3.5_01215 1132855.KB913035_gene1779 5.3e-27 127.5 Nitrosomonadales flgN ko:K02399 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1NGUP@1224,2KN6F@206350,2VXS1@28216,COG3418@1,COG3418@2 NA|NA|NA NOU FlgN protein MAG.C3.5_01216 666681.M301_1703 1.6e-16 92.0 Nitrosomonadales flgM GO:0000988,GO:0000989,GO:0003674,GO:0008150,GO:0009889,GO:0009892,GO:0010556,GO:0010605,GO:0016989,GO:0019219,GO:0019222,GO:0030162,GO:0031323,GO:0031324,GO:0031326,GO:0032268,GO:0032269,GO:0045861,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 ko:K02398 ko02020,ko02025,ko02026,ko02040,map02020,map02025,map02026,map02040 ko00000,ko00001,ko02035 Bacteria 1NGJA@1224,2KN88@206350,2VXZB@28216,COG2747@1,COG2747@2 NA|NA|NA KNU PFAM Anti-sigma-28 factor FlgM MAG.C3.5_01217 1132855.KB913035_gene1781 2.8e-70 271.9 Nitrosomonadales flgA GO:0001539,GO:0006928,GO:0008150,GO:0009987,GO:0040011,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0097588 ko:K02279,ko:K02386 ko02040,map02040 ko00000,ko00001,ko02035,ko02044 Bacteria 1N1SA@1224,2KMBU@206350,2VR6V@28216,COG1261@1,COG1261@2 NA|NA|NA N flagella basal body P-ring formation protein FlgA MAG.C3.5_01218 583345.Mmol_0950 4.8e-43 180.6 Nitrosomonadales flgB GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009424,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588 ko:K02387 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1MZ8P@1224,2KN01@206350,2VUJ4@28216,COG1815@1,COG1815@2 NA|NA|NA N Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body MAG.C3.5_01219 1101195.Meth11DRAFT_1532 2.7e-54 218.0 Nitrosomonadales flgC GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009424,GO:0009425,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588 ko:K02388 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1RHI3@1224,2KMTP@206350,2VSK1@28216,COG1558@1,COG1558@2 NA|NA|NA N Belongs to the flagella basal body rod proteins family MAG.C3.5_01220 1101195.Meth11DRAFT_1533 1.6e-64 252.7 Nitrosomonadales flgD GO:0001539,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006928,GO:0008150,GO:0009288,GO:0009424,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044424,GO:0044444,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588 ko:K02389,ko:K02390 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1MXCG@1224,2KMM2@206350,2VSF6@28216,COG1843@1,COG1843@2 NA|NA|NA N Required for flagellar hook formation. May act as a scaffolding protein MAG.C3.5_01221 1165096.ARWF01000001_gene907 7.2e-159 567.0 Nitrosomonadales flgE GO:0001539,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006928,GO:0008150,GO:0009288,GO:0009424,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044424,GO:0044444,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588 ko:K02390 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1MU5J@1224,2KKP1@206350,2VIV1@28216,COG1749@1,COG1749@2 NA|NA|NA N Flagellar basal body rod MAG.C3.5_01222 1502770.JQMG01000001_gene2183 1.6e-100 372.5 Nitrosomonadales flgF GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009424,GO:0009425,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588 ko:K02391 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1NZWQ@1224,2KM1W@206350,2VISC@28216,COG4787@1,COG4787@2 NA|NA|NA N Belongs to the flagella basal body rod proteins family MAG.C3.5_01223 1101195.Meth11DRAFT_1536 1.3e-121 442.6 Nitrosomonadales flgG GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009279,GO:0009288,GO:0009424,GO:0009425,GO:0009987,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044462,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071944,GO:0071973,GO:0071978,GO:0097588 ko:K02392 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1MVMA@1224,2KKBI@206350,2VH7A@28216,COG4786@1,COG4786@2 NA|NA|NA N flagellar basal-body rod protein FlgG MAG.C3.5_01224 1101195.Meth11DRAFT_1537 1.2e-67 263.1 Nitrosomonadales flgH ko:K02393 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1RDEY@1224,2KP68@206350,2VRIC@28216,COG2063@1,COG2063@2 NA|NA|NA N Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation MAG.C3.5_01225 1101195.Meth11DRAFT_1538 8.1e-149 533.5 Nitrosomonadales flgI GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0006950,GO:0006974,GO:0008150,GO:0009288,GO:0009425,GO:0009987,GO:0033554,GO:0040011,GO:0042597,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0071973,GO:0097588 ko:K02394 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1MVKW@1224,2KKTZ@206350,2VJAZ@28216,COG1706@1,COG1706@2 NA|NA|NA N Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation MAG.C3.5_01226 666681.M301_1713 2.4e-98 365.5 Nitrosomonadales flgJ GO:0001539,GO:0003674,GO:0005198,GO:0006928,GO:0008150,GO:0009987,GO:0040011,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0097588 3.5.1.28 ko:K01448,ko:K02395 ko01503,map01503 M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011,ko02035,ko03036 Bacteria 1MX2W@1224,2KMDM@206350,2VH35@28216,COG1705@1,COG1705@2,COG3951@1,COG3951@2 NA|NA|NA N TIGRFAM flagellar rod assembly protein muramidase FlgJ MAG.C3.5_01227 1165096.ARWF01000001_gene913 4.4e-171 608.2 Nitrosomonadales flgK GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0044085,GO:0044780,GO:0044781,GO:0070925,GO:0071840 ko:K02396 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1MV2M@1224,2KKC0@206350,2VH02@28216,COG1256@1,COG1256@2 NA|NA|NA N Belongs to the flagella basal body rod proteins family MAG.C3.5_01228 666681.M301_1715 5.4e-79 301.2 Nitrosomonadales flgL GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 ko:K02397 ko02040,map02040 ko00000,ko00001,ko02035 Bacteria 1PJUJ@1224,2KMFX@206350,2VM4I@28216,COG1344@1,COG1344@2 NA|NA|NA N TIGRFAM flagellar hook-associated protein 3 MAG.C3.5_01229 582744.Msip34_1864 1.6e-163 582.4 Nitrosomonadales ko:K00786 ko00000,ko01000 Bacteria 1MUB7@1224,2KMIK@206350,2VN6W@28216,COG0438@1,COG0438@2 NA|NA|NA M PFAM glycosyl transferase group 1 MAG.C3.5_01230 265072.Mfla_0788 1.1e-46 192.6 Nitrosomonadales dgkA 2.7.1.107 ko:K00901 ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00561,map00564,map01100,map01110,map04070,map04072,map05231 R02240 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 1MZ3Q@1224,2KMXB@206350,2VU5Y@28216,COG0818@1,COG0818@2 NA|NA|NA M Recycling of diacylglycerol produced during the turnover of membrane phospholipid MAG.C3.5_01231 582744.Msip34_1867 2.4e-105 388.7 Nitrosomonadales Bacteria 1RG4V@1224,2DJVG@1,2KMGW@206350,2VS8I@28216,307GH@2 NA|NA|NA S Zinc dependent phospholipase C MAG.C3.5_01232 357804.Ping_0587 4.9e-38 163.7 Psychromonadaceae ynfA GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 ko:K09771 ko00000,ko02000 2.A.7.26 Bacteria 1MZI8@1224,1SA4U@1236,2QJ7B@267894,COG1742@1,COG1742@2 NA|NA|NA S Uncharacterised BCR, YnfA/UPF0060 family MAG.C3.5_01233 582744.Msip34_0542 3.9e-288 996.9 Nitrosomonadales clpB GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0010033,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0031249,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0035966,GO:0036094,GO:0042221,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 ko:K03694,ko:K03695 ko04213,map04213 ko00000,ko00001,ko03110 Bacteria 1MURH@1224,2KM7M@206350,2VHYF@28216,COG0542@1,COG0542@2 NA|NA|NA O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE MAG.C3.5_01234 582744.Msip34_0545 5.3e-95 354.4 Nitrosomonadales slt_1 ko:K07126 ko00000 Bacteria 1MZ4X@1224,2KKV8@206350,2VM6E@28216,COG0741@1,COG0741@2,COG0790@1,COG0790@2 NA|NA|NA M SMART Sel1 domain protein repeat-containing protein MAG.C3.5_01235 582744.Msip34_0546 2.2e-45 188.7 Nitrosomonadales Bacteria 1P2XH@1224,2CIM7@1,2KN74@206350,2W46T@28216,345N4@2 NA|NA|NA MAG.C3.5_01236 1236959.BAMT01000002_gene2214 7.2e-188 663.7 Nitrosomonadales tqsA ko:K10914 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 ko00000,ko00001,ko03000 Bacteria 1MW0B@1224,2KMHK@206350,2VHDW@28216,COG0628@1,COG0628@2,COG0664@1,COG0664@2 NA|NA|NA K AI-2E family transporter MAG.C3.5_01237 582744.Msip34_0547 5e-56 223.8 Nitrosomonadales yjbQ Bacteria 1RH13@1224,2KMR1@206350,2VT5I@28216,COG0432@1,COG0432@2 NA|NA|NA S Uncharacterised protein family UPF0047 MAG.C3.5_01238 582744.Msip34_0548 2.7e-163 581.6 Betaproteobacteria eutG 1.1.1.1,4.3.3.7 ko:K00001,ko:K01714 ko00010,ko00071,ko00261,ko00300,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,ko01230,map00010,map00071,map00261,map00300,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220,map01230 M00016,M00525,M00526,M00527 R00623,R00754,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310,R10147 RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273,RC03062,RC03063 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVPH@1224,2VI90@28216,COG1454@1,COG1454@2 NA|NA|NA C alcohol dehydrogenase MAG.C3.5_01239 395494.Galf_0016 2.3e-117 429.5 Betaproteobacteria glnL ko:K07719 ko02020,map02020 M00518 ko00000,ko00001,ko00002,ko02022 Bacteria 1NNCT@1224,2VK0Z@28216,COG0457@1,COG0457@2,COG0784@1,COG0784@2 NA|NA|NA T Response regulator receiver MAG.C3.5_01240 582744.Msip34_0727 9.2e-259 899.8 Betaproteobacteria ko:K02652 ko00000,ko02035,ko02044 3.A.15.2 Bacteria 1MU7V@1224,2VHQ1@28216,COG2804@1,COG2804@2 NA|NA|NA NU type II secretion system protein E MAG.C3.5_01241 265072.Mfla_2189 5.2e-109 401.4 Nitrosomonadales envC GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 ko:K06194,ko:K21471 ko00000,ko01000,ko01002,ko01011 1.A.34.1.2 Bacteria 1MY3E@1224,2KKQY@206350,2VIV9@28216,COG4942@1,COG4942@2 NA|NA|NA D Peptidase family M23 MAG.C3.5_01242 666681.M301_0570 1.2e-232 812.4 Nitrosomonadales gpmI GO:0003674,GO:0003824,GO:0004619,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0030145,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043167,GO:0043169,GO:0043436,GO:0043937,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046537,GO:0046700,GO:0046872,GO:0046914,GO:0046939,GO:0050789,GO:0050793,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.4.2.12 ko:K15633 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000 iECSE_1348.ECSE_3895,iJN678.yibO,iJN746.PP_5056 Bacteria 1MUQ1@1224,2KM0U@206350,2VMTN@28216,COG0696@1,COG0696@2 NA|NA|NA G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate MAG.C3.5_01243 582744.Msip34_0552 5.3e-34 150.6 Nitrosomonadales yibN GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.8.1.1,2.8.1.2 ko:K01011,ko:K02439 ko00270,ko00920,ko01100,ko01110,ko01120,ko04122,map00270,map00920,map01100,map01110,map01120,map04122 R01931,R03105,R03106 RC00214 ko00000,ko00001,ko01000 Bacteria 1MZ83@1224,2KN1N@206350,2VU3D@28216,COG0607@1,COG0607@2 NA|NA|NA P Rhodanese Homology Domain MAG.C3.5_01244 1132855.KB913035_gene2274 7.5e-34 149.4 Nitrosomonadales grxC ko:K03676 ko00000,ko03110 Bacteria 1N72P@1224,2KN2J@206350,2VU2J@28216,COG0695@1,COG0695@2 NA|NA|NA O Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins MAG.C3.5_01245 1236959.BAMT01000002_gene2222 7.6e-61 240.0 Nitrosomonadales secB GO:0002790,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006605,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0034613,GO:0042886,GO:0043952,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0051082,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0072321 ko:K03071 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044,ko03110 3.A.5 Bacteria 1RI75@1224,2KMSR@206350,2VQ1Q@28216,COG1952@1,COG1952@2 NA|NA|NA U One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA MAG.C3.5_01246 265072.Mfla_2184 2.8e-48 198.0 Nitrosomonadales MA20_24010 3.2.1.96,3.4.17.14,3.5.1.28,6.1.1.12 ko:K01227,ko:K01447,ko:K01448,ko:K01876,ko:K06385,ko:K07260,ko:K11060,ko:K11062 ko00511,ko00550,ko00970,ko01100,ko01502,ko01503,ko02020,map00511,map00550,map00970,map01100,map01502,map01503,map02020 M00359,M00360,M00651,M00727 R04112,R05577 RC00055,RC00064,RC00141,RC00523 ko00000,ko00001,ko00002,ko01000,ko01002,ko01007,ko01011,ko01504,ko02042,ko03016,ko03029,ko03036 Bacteria 1MZIA@1224,2KN0W@206350,2VUTD@28216,COG3807@1,COG3807@2 NA|NA|NA S Bacterial SH3 domain MAG.C3.5_01247 265072.Mfla_2183 5e-147 527.3 Nitrosomonadales gpsA GO:0003674,GO:0003824,GO:0004367,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006072,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0047952,GO:0052646,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.1.1.94 ko:K00057 ko00564,ko01110,map00564,map01110 R00842,R00844 RC00029 ko00000,ko00001,ko01000 iSFV_1184.SFV_3923 Bacteria 1MUU3@1224,2KME0@206350,2VJ91@28216,COG0240@1,COG0240@2 NA|NA|NA C PFAM NAD-dependent glycerol-3-phosphate dehydrogenase MAG.C3.5_01248 1132855.KB913035_gene2270 1.6e-71 275.4 Nitrosomonadales trmL GO:0001510,GO:0002128,GO:0002130,GO:0002131,GO:0002132,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016427,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0052665,GO:0052666,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.207 ko:K03216 ko00000,ko01000,ko03016 Bacteria 1RCY4@1224,2KMPS@206350,2VR5W@28216,COG0219@1,COG0219@2 NA|NA|NA J Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide MAG.C3.5_01249 582744.Msip34_0562 2.3e-69 268.9 Nitrosomonadales comF GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0015976,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 Bacteria 1RHAV@1224,2KMQA@206350,2VSPK@28216,COG1040@1,COG1040@2 NA|NA|NA S Phosphoribosyl transferase domain MAG.C3.5_01250 582744.Msip34_0563 3.3e-49 201.1 Nitrosomonadales Bacteria 1NB0X@1224,2DPBX@1,2KNWK@206350,2VX47@28216,331FU@2 NA|NA|NA MAG.C3.5_01251 582744.Msip34_0564 8.1e-169 599.7 Nitrosomonadales bioB GO:0003674,GO:0003824,GO:0004076,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0017144,GO:0018130,GO:0019752,GO:0030312,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0070283,GO:0071704,GO:0071944,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.6 ko:K01012 ko00780,ko01100,map00780,map01100 M00123,M00573,M00577 R01078 RC00441 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv1589,iZ_1308.Z0994 Bacteria 1MVFF@1224,2KMD6@206350,2VHZZ@28216,COG0502@1,COG0502@2 NA|NA|NA H Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism MAG.C3.5_01252 265072.Mfla_0960 1.1e-82 312.8 Nitrosomonadales dhaK GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0047324 2.7.1.121,2.7.1.28,2.7.1.29,4.6.1.15 ko:K00863,ko:K05878 ko00051,ko00561,ko00680,ko01100,ko01120,ko01200,ko04622,map00051,map00561,map00680,map01100,map01120,map01200,map04622 M00344 R01011,R01012,R01059 RC00002,RC00015,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVSR@1224,2KKCR@206350,2VJ09@28216,COG2376@1,COG2376@2 NA|NA|NA G TIGRFAM dihydroxyacetone kinase, DhaK subunit MAG.C3.5_01253 999141.GME_09636 3e-44 185.3 Oceanospirillales 2.5.1.18 ko:K00799 ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418 R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905 RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944 ko00000,ko00001,ko01000,ko02000 1.A.12.2.2,1.A.12.3.2 Bacteria 1RAIN@1224,1S3Q5@1236,1XKHU@135619,COG0625@1,COG0625@2 NA|NA|NA O Belongs to the GST superfamily MAG.C3.5_01254 583345.Mmol_1504 1.2e-113 416.0 Nitrosomonadales rsuA 5.4.99.19,5.4.99.20,5.4.99.22 ko:K06178,ko:K06181,ko:K06183 ko00000,ko01000,ko03009 Bacteria 1MU6M@1224,2KKJY@206350,2VIXH@28216,COG1187@1,COG1187@2 NA|NA|NA J Belongs to the pseudouridine synthase RsuA family MAG.C3.5_01255 1165096.ARWF01000001_gene883 1.6e-214 753.1 Nitrosomonadales mcpY ko:K03406 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko02035 Bacteria 1MU9B@1224,2KMF1@206350,2VGZ8@28216,COG0840@1,COG0840@2 NA|NA|NA T chemotaxis sensory transducer MAG.C3.5_01256 1101195.Meth11DRAFT_1510 4.2e-130 471.9 Nitrosomonadales mcpY ko:K03406 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko02035 Bacteria 1MU9B@1224,2KMF1@206350,2VGZ8@28216,COG0840@1,COG0840@2 NA|NA|NA T chemotaxis sensory transducer MAG.C3.5_01258 666681.M301_1023 1.6e-123 449.1 Nitrosomonadales etfA ko:K03522 ko00000,ko04147 Bacteria 1MUFI@1224,2KM91@206350,2VI6W@28216,COG2025@1,COG2025@2 NA|NA|NA C Electron transfer flavoprotein, alpha subunit MAG.C3.5_01259 1165096.ARWF01000001_gene1071 9.5e-106 389.8 Nitrosomonadales etfB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114 ko:K03521 ko00000 Bacteria 1MVH6@1224,2KKVA@206350,2VHXJ@28216,COG2086@1,COG2086@2 NA|NA|NA C PFAM Electron transfer flavoprotein MAG.C3.5_01260 1165096.ARWF01000001_gene1070 1.8e-146 525.4 Nitrosomonadales yeiE Bacteria 1MWVU@1224,2KMCC@206350,2VHCI@28216,COG0583@1,COG0583@2 NA|NA|NA K Transcriptional regulator, LysR family MAG.C3.5_01262 1502770.JQMG01000001_gene1352 2.2e-142 511.9 Nitrosomonadales pmbA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564 ko:K03592 ko00000,ko01002 Bacteria 1MUVW@1224,2KKFE@206350,2VHJ4@28216,COG0312@1,COG0312@2 NA|NA|NA S PFAM peptidase U62 modulator of DNA gyrase MAG.C3.5_01263 1121004.ATVC01000052_gene13 1.4e-146 526.6 Betaproteobacteria wxcD Bacteria 1NPA5@1224,2W19T@28216,COG0438@1,COG0438@2 NA|NA|NA M Glycosyl transferases group 1 MAG.C3.5_01264 582744.Msip34_2180 3.2e-98 364.8 Nitrosomonadales vacJ GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0008150,GO:0009987,GO:0010876,GO:0015711,GO:0015748,GO:0015914,GO:0016043,GO:0033036,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071840,GO:0120009,GO:0120010 ko:K04754 ko00000 Bacteria 1MVX0@1224,2KKP8@206350,2VQ97@28216,COG2853@1,COG2853@2 NA|NA|NA M MlaA lipoprotein MAG.C3.5_01265 1132855.KB913035_gene472 1.2e-199 702.6 Nitrosomonadales chrA ko:K07240 ko00000,ko02000 2.A.51.1 Bacteria 1MUBW@1224,2KM71@206350,2VHPW@28216,COG2059@1,COG2059@2 NA|NA|NA P TIGRFAM chromate transporter, chromate ion transporter (CHR) family MAG.C3.5_01266 582744.Msip34_2176 1.3e-164 585.9 Nitrosomonadales phr 4.1.99.3 ko:K01669 ko00000,ko01000,ko03400 Bacteria 1MV9Y@1224,2KKBP@206350,2VITS@28216,COG0415@1,COG0415@2 NA|NA|NA L PFAM DNA photolyase FAD-binding MAG.C3.5_01267 582744.Msip34_1546 1.6e-216 758.4 Nitrosomonadales trpB GO:0000162,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0042802,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 ko:K01696 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722 RC00209,RC00210,RC00700,RC00701,RC02868 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUS8@1224,2KKB6@206350,2VHV3@28216,COG0133@1,COG0133@2 NA|NA|NA E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine MAG.C3.5_01268 582744.Msip34_1545 4e-110 404.4 Nitrosomonadales trpA 4.2.1.20 ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722 RC00209,RC00210,RC00700,RC00701,RC02868 ko00000,ko00001,ko00002,ko01000 Bacteria 1MXJV@1224,2KMAC@206350,2VI78@28216,COG0159@1,COG0159@2 NA|NA|NA E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate MAG.C3.5_01269 582744.Msip34_1544 4.9e-138 497.3 Nitrosomonadales accD GO:0001676,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003729,GO:0003824,GO:0003989,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006417,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0009058,GO:0009317,GO:0009329,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0017148,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032787,GO:0032991,GO:0034248,GO:0034249,GO:0042759,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:0097159,GO:1901363,GO:1901576,GO:1902494,GO:1990234,GO:2000112,GO:2000113 2.1.3.15,6.4.1.2 ko:K01963 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04386 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 iJN678.accD,iPC815.YPO2768,iUTI89_1310.UTI89_C2601 Bacteria 1MW8G@1224,2KME6@206350,2VHEQ@28216,COG0777@1,COG0777@2 NA|NA|NA I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA MAG.C3.5_01270 265072.Mfla_1695 1.9e-133 482.6 Nitrosomonadales folC GO:0003674,GO:0003824,GO:0004326,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006761,GO:0006807,GO:0008150,GO:0008152,GO:0008841,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046452,GO:0046483,GO:0046900,GO:0046901,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.12,6.3.2.17 ko:K11754 ko00790,ko01100,map00790,map01100 M00126,M00841 R00942,R02237,R04241 RC00064,RC00090,RC00162 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_2475,iJN746.PP_1997,iSDY_1059.SDY_2514 Bacteria 1MVCH@1224,2KKX6@206350,2VI0H@28216,COG0285@1,COG0285@2 NA|NA|NA H Belongs to the folylpolyglutamate synthase family MAG.C3.5_01271 265072.Mfla_1694 4.3e-40 171.8 Nitrosomonadales dedD ko:K02520,ko:K03749,ko:K06204,ko:K16291 ko02026,map02026 ko00000,ko00001,ko01002,ko01011,ko03000,ko03009,ko03012,ko03021,ko03029 Bacteria 1R7IV@1224,2KN62@206350,2VPE1@28216,COG3147@1,COG3147@2 NA|NA|NA S Sporulation related domain MAG.C3.5_01272 582744.Msip34_1541 4.7e-61 240.7 Nitrosomonadales cvpA GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009058,GO:0009403,GO:0009404,GO:0009987,GO:0016020,GO:0019748,GO:0044237,GO:0044249,GO:0044464,GO:0044550,GO:0071944 ko:K03558 ko00000 Bacteria 1NF4G@1224,2KMQW@206350,2VUM6@28216,COG1286@1,COG1286@2 NA|NA|NA S PFAM Colicin V production protein MAG.C3.5_01273 582744.Msip34_1540 3.5e-272 943.7 Nitrosomonadales purF GO:0003674,GO:0003824,GO:0004044,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006520,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009117,GO:0009165,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019637,GO:0019752,GO:0034641,GO:0034654,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.4.2.14 ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048 R01072 RC00010,RC02724,RC02752 ko00000,ko00001,ko00002,ko01000,ko01002 iAF1260.b2312,iB21_1397.B21_02197,iBWG_1329.BWG_2086,iECBD_1354.ECBD_1347,iECB_1328.ECB_02237,iECDH10B_1368.ECDH10B_2474,iECDH1ME8569_1439.ECDH1ME8569_2250,iECD_1391.ECD_02237,iECIAI1_1343.ECIAI1_2389,iECO103_1326.ECO103_2776,iECO111_1330.ECO111_3060,iECO26_1355.ECO26_3300,iECW_1372.ECW_m2501,iEKO11_1354.EKO11_1453,iETEC_1333.ETEC_2448,iEcDH1_1363.EcDH1_1344,iEcE24377_1341.EcE24377A_2606,iEcolC_1368.EcolC_1340,iJO1366.b2312,iJR904.b2312,iSF_1195.SF2388,iSFxv_1172.SFxv_2633,iSSON_1240.SSON_2370,iS_1188.S2523,iSbBS512_1146.SbBS512_E2690,iUMNK88_1353.UMNK88_2863,iWFL_1372.ECW_m2501,iY75_1357.Y75_RS12125 Bacteria 1MU0V@1224,2KKZ4@206350,2VJM1@28216,COG0034@1,COG0034@2 NA|NA|NA F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine MAG.C3.5_01274 582744.Msip34_1539 1.6e-197 695.3 Nitrosomonadales metZ GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48,4.4.1.8 ko:K01739,ko:K01760,ko:K10764 ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230 M00017 R00782,R00999,R01286,R01288,R02408,R02508,R03217,R03260,R04941,R04944,R04945,R04946 RC00020,RC00056,RC00069,RC00382,RC00420,RC00488,RC00710,RC01245,RC02303,RC02848,RC02866 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv0391 Bacteria 1MU57@1224,2KM6H@206350,2WGGJ@28216,COG0626@1,COG0626@2 NA|NA|NA E Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide MAG.C3.5_01275 1236959.BAMT01000001_gene1434 8.7e-102 376.3 Nitrosomonadales ahpC 1.11.1.15 ko:K03386,ko:K20011 ko04214,map04214 ko00000,ko00001,ko01000,ko04147 Bacteria 1MWPY@1224,2KNKQ@206350,2VI7T@28216,COG0450@1,COG0450@2 NA|NA|NA O C-terminal domain of 1-Cys peroxiredoxin MAG.C3.5_01276 582744.Msip34_1535 0.0 1560.4 Nitrosomonadales gyrA GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0018130,GO:0019438,GO:0032774,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0042493,GO:0042623,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097659,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 ko:K02469 ko00000,ko01000,ko03032,ko03400 Bacteria 1MUGG@1224,2KM6T@206350,2VJ5Q@28216,COG0188@1,COG0188@2 NA|NA|NA L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner MAG.C3.5_01277 582744.Msip34_1534 1.9e-168 598.6 Nitrosomonadales serC GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 M00020,M00124 R04173,R05085 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1MUB5@1224,2KKVE@206350,2VH5M@28216,COG1932@1,COG1932@2 NA|NA|NA E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine MAG.C3.5_01278 582744.Msip34_1533 1e-77 296.2 Nitrosomonadales pheA GO:0003674,GO:0003824,GO:0004106,GO:0004664,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006558,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0017144,GO:0019438,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 1.3.1.12,2.3.1.79,4.2.1.51,4.2.1.91,5.4.99.5 ko:K00661,ko:K01713,ko:K04092,ko:K04093,ko:K04516,ko:K04518,ko:K14170,ko:K14187 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 M00024,M00025 R00691,R01373,R01715,R01728 RC00125,RC00360,RC03116 ko00000,ko00001,ko00002,ko01000 iECNA114_1301.ECNA114_2667 Bacteria 1MU60@1224,2KKEH@206350,2VJEV@28216,COG0077@1,COG0077@2,COG1605@1,COG1605@2 NA|NA|NA E amino acid-binding ACT domain protein MAG.C3.5_01279 63577.G9NQK4 4.2e-23 114.0 Ascomycota Fungi 39KCQ@33154,3PBHS@4751,3RN10@4890,COG1087@1,KOG1371@2759 NA|NA|NA M RmlD substrate binding domain MAG.C3.5_01280 265072.Mfla_2364 8e-78 296.6 Nitrosomonadales Bacteria 1NMVA@1224,2KKKR@206350,2W0JG@28216,COG1795@1,COG1795@2 NA|NA|NA S Formaldehyde-activating enzyme (Fae) MAG.C3.5_01281 1158292.JPOE01000005_gene1060 2.9e-87 328.2 Betaproteobacteria Bacteria 1RDVJ@1224,2VHK1@28216,COG2755@1,COG2755@2 NA|NA|NA E GDSL-like Lipase/Acylhydrolase family MAG.C3.5_01282 582744.Msip34_2464 1.1e-89 336.3 Nitrosomonadales narL GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0062012,GO:0065007,GO:0080090,GO:0090352,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903314,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 ko:K07684 ko02020,map02020 M00471 ko00000,ko00001,ko00002,ko02022 Bacteria 1NQH7@1224,2KP4A@206350,2VP8T@28216,COG2197@1,COG2197@2 NA|NA|NA K Winged helix-turn-helix DNA-binding MAG.C3.5_01283 582744.Msip34_2465 5.1e-177 627.9 Nitrosomonadales 2.7.13.3 ko:K07673,ko:K07675 ko02020,map02020 M00471,M00473 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1MWZT@1224,2KM4F@206350,2VR0M@28216,COG3850@1,COG3850@2 NA|NA|NA T Histidine kinase MAG.C3.5_01284 582744.Msip34_2466 4.8e-159 567.8 Nitrosomonadales Bacteria 1QXB5@1224,2KM85@206350,2VZW3@28216,COG2202@1,COG2202@2 NA|NA|NA T Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MAG.C3.5_01285 582744.Msip34_2467 2.9e-92 345.1 Nitrosomonadales Bacteria 1RK4D@1224,2C5U9@1,2KN4K@206350,2VKK4@28216,318BZ@2 NA|NA|NA S Bacterial protein of unknown function (Gcw_chp) MAG.C3.5_01286 582744.Msip34_2468 4.5e-162 577.4 Nitrosomonadales 1.14.13.238 ko:K22342 ko00000,ko01000 Bacteria 1N6CK@1224,2DB9X@1,2KMHB@206350,2VP3T@28216,2Z7ZS@2 NA|NA|NA S Protein of unknown function (DUF3445) MAG.C3.5_01287 666681.M301_1393 4.5e-137 494.2 Nitrosomonadales yeaX 1.14.13.238 ko:K22343 ko00000,ko01000 Bacteria 1MU6E@1224,2KKNF@206350,2VK6Y@28216,COG1018@1,COG1018@2 NA|NA|NA C Oxidoreductase NAD-binding domain MAG.C3.5_01288 666681.M301_1394 2.4e-67 261.9 Nitrosomonadales 1.14.13.238 ko:K22344 ko00000,ko01000 Bacteria 1N0PJ@1224,28IUB@1,2KMPE@206350,2VUS4@28216,2Z8T2@2 NA|NA|NA MAG.C3.5_01289 582744.Msip34_2471 4.4e-176 624.0 Nitrosomonadales 1.5.3.1,2.1.2.10 ko:K00302,ko:K00305,ko:K00605 ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200 M00532 R00610,R01221,R02300,R04125 RC00022,RC00060,RC00069,RC00183,RC00557,RC02834 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV96@1224,2KM4B@206350,2VIT9@28216,COG0404@1,COG0404@2 NA|NA|NA E PFAM glycine cleavage T protein (aminomethyl transferase) MAG.C3.5_01290 358220.C380_11515 3e-73 282.7 Comamonadaceae yfiN GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0008150,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0032153,GO:0032879,GO:0033554,GO:0036460,GO:0040012,GO:0040013,GO:0042802,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051270,GO:0051271,GO:0051716,GO:0052621,GO:0065007,GO:0071944,GO:1902021,GO:1902201,GO:2000145,GO:2000146 2.7.7.65 ko:K21021 ko02025,map02025 ko00000,ko00001,ko01000 Bacteria 1RE33@1224,2VRWV@28216,4AE1D@80864,COG2199@1,COG2199@2,COG2202@1,COG2202@2,COG3706@2 NA|NA|NA T PFAM GGDEF domain containing protein MAG.C3.5_01291 1123400.KB904816_gene1558 2.6e-40 171.4 Gammaproteobacteria Bacteria 1N3I8@1224,1SYD7@1236,COG3755@1,COG3755@2 NA|NA|NA S Lysozyme inhibitor LprI MAG.C3.5_01296 582744.Msip34_1426 1.4e-50 206.1 Nitrosomonadales 3.1.3.18 ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 R01334 RC00017 ko00000,ko00001,ko01000 Bacteria 1REXF@1224,2KNCS@206350,2VS3D@28216,COG0546@1,COG0546@2 NA|NA|NA S haloacid dehalogenase-like hydrolase MAG.C3.5_01297 1173026.Glo7428_0908 5.6e-06 60.1 Cyanobacteria Bacteria 1G2GC@1117,COG2931@1,COG2931@2 NA|NA|NA Q FG-GAP repeat MAG.C3.5_01298 582744.Msip34_1424 8.5e-32 142.5 Nitrosomonadales Bacteria 1PJUQ@1224,2A8WH@1,2KP2A@206350,2W86J@28216,30XZW@2 NA|NA|NA MAG.C3.5_01299 582744.Msip34_1423 5.6e-103 380.6 Betaproteobacteria Bacteria 1MWBC@1224,2VMWZ@28216,COG1028@1,COG1028@2 NA|NA|NA IQ dehydrogenase reductase MAG.C3.5_01300 582744.Msip34_1422 7.6e-38 163.3 Nitrosomonadales yvlD ko:K08972 ko00000 Bacteria 1N1DF@1224,2KNWB@206350,2VUY1@28216,COG1950@1,COG1950@2 NA|NA|NA S Mycobacterial 4 TMS phage holin, superfamily IV MAG.C3.5_01301 1236959.BAMT01000001_gene1547 7.7e-119 434.1 Nitrosomonadales hpnE 1.17.8.1 ko:K21677 ko00000,ko01000 Bacteria 1NQUH@1224,2KM1H@206350,2VJV1@28216,COG1232@1,COG1232@2 NA|NA|NA H TIGRFAM squalene-associated FAD-dependent desaturase MAG.C3.5_01302 582744.Msip34_1420 3.8e-69 267.7 Nitrosomonadales hpnD 2.5.1.32,2.5.1.99 ko:K02291 ko00906,ko01062,ko01100,ko01110,map00906,map01062,map01100,map01110 M00097 R02065,R04218,R07270,R10177 RC00362,RC01101,RC02869 ko00000,ko00001,ko00002,ko01000,ko01006 Bacteria 1MX4W@1224,2KKYA@206350,2VJ13@28216,COG1562@1,COG1562@2 NA|NA|NA I TIGRFAM squalene synthase HpnD MAG.C3.5_01303 582744.Msip34_0677 0.0 1345.5 Nitrosomonadales nuoG 1.6.5.3 ko:K00336 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 Bacteria 1P8MN@1224,2KKUM@206350,2VJYV@28216,COG1034@1,COG1034@2 NA|NA|NA C TIGRFAM NADH-quinone oxidoreductase, chain G MAG.C3.5_01304 1236959.BAMT01000010_gene3269 1.2e-228 798.9 Nitrosomonadales nuoF GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 ko:K00334,ko:K00335 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 Bacteria 1MV8F@1224,2KMA3@206350,2VJJ1@28216,COG1894@1,COG1894@2 NA|NA|NA C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain MAG.C3.5_01305 582744.Msip34_0675 2.5e-72 278.1 Nitrosomonadales nuoE 1.6.5.3,1.6.99.3 ko:K00334,ko:K03943 ko00190,ko01100,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map04714,map04723,map04932,map05010,map05012,map05016 M00143,M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1,3.D.1.6 Bacteria 1MWS2@1224,2KMP6@206350,2VQD9@28216,COG1905@1,COG1905@2 NA|NA|NA C TIGRFAM NADH-quinone oxidoreductase, E subunit MAG.C3.5_01306 582744.Msip34_0674 1.7e-232 811.6 Nitrosomonadales nuoD GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 ko:K00333,ko:K13378 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 Bacteria 1MVIN@1224,2KMAZ@206350,2VHEC@28216,COG0649@1,COG0649@2 NA|NA|NA C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient MAG.C3.5_01307 1236959.BAMT01000010_gene3266 1e-86 326.2 Nitrosomonadales nuoC GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 ko:K00332 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 Bacteria 1MX4B@1224,2KKBU@206350,2VHHV@28216,COG0852@1,COG0852@2 NA|NA|NA C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient MAG.C3.5_01308 582744.Msip34_0672 3.3e-88 330.9 Nitrosomonadales nuoB GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 ko:K00331 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 Bacteria 1MUI2@1224,2KKS7@206350,2VIWK@28216,COG0377@1,COG0377@2 NA|NA|NA C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient MAG.C3.5_01309 265072.Mfla_2061 3.6e-55 220.7 Nitrosomonadales nuoA GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044464,GO:0050136,GO:0055114,GO:0071944,GO:0098796,GO:1902494 1.6.5.3 ko:K00330 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 Bacteria 1RGUT@1224,2KMRP@206350,2VSI3@28216,COG0838@1,COG0838@2 NA|NA|NA C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient MAG.C3.5_01311 582744.Msip34_0670 1e-30 139.8 Nitrosomonadales secG GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 Bacteria 1N8MF@1224,2KN4I@206350,2VU0P@28216,COG1314@1,COG1314@2 NA|NA|NA U PFAM Preprotein translocase SecG subunit MAG.C3.5_01312 265072.Mfla_2064 4e-104 384.4 Nitrosomonadales tpiA GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003 R01015 RC00423 ko00000,ko00001,ko00002,ko01000,ko04147 iJN746.PP_4715 Bacteria 1MWK5@1224,2KKI7@206350,2VIRP@28216,COG0149@1,COG0149@2 NA|NA|NA G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) MAG.C3.5_01313 582744.Msip34_0668 9.7e-223 779.6 Nitrosomonadales recJ GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008297,GO:0008409,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0035312,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0045145,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1MU1M@1224,2KM81@206350,2VIGF@28216,COG0608@1,COG0608@2 NA|NA|NA L phosphoesterase RecJ domain protein MAG.C3.5_01314 1236959.BAMT01000010_gene3260 3.3e-25 122.5 Nitrosomonadales rpfE Bacteria 1R59K@1224,2KMWW@206350,2VKW9@28216,COG4255@1,COG4255@2 NA|NA|NA S protein conserved in bacteria MAG.C3.5_01315 265072.Mfla_2067 3.8e-49 201.1 Nitrosomonadales sixA ko:K08296 ko00000,ko01000 Bacteria 1RIVH@1224,2KN7I@206350,2VSSQ@28216,COG2062@1,COG2062@2 NA|NA|NA T Phosphoglycerate mutase family MAG.C3.5_01316 582744.Msip34_0665 5.6e-91 340.5 Nitrosomonadales parA ko:K03496 ko00000,ko03036,ko04812 Bacteria 1QBJX@1224,2KMPQ@206350,2VJNI@28216,COG1192@1,COG1192@2 NA|NA|NA D ATPase MipZ MAG.C3.5_01317 582744.Msip34_0664 8.4e-78 297.4 Nitrosomonadales 3.6.1.25,4.6.1.1 ko:K01768,ko:K18446 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000 Bacteria 1MY43@1224,2KMUV@206350,2VM3G@28216,COG3025@1,COG3025@2 NA|NA|NA S CYTH MAG.C3.5_01318 1101195.Meth11DRAFT_1764 3.7e-27 128.6 Nitrosomonadales Bacteria 1MVWD@1224,2KMT7@206350,2VTZ2@28216,COG3134@1,COG3134@2 NA|NA|NA S PFAM 17 kDa surface antigen MAG.C3.5_01319 666681.M301_1863 4.9e-76 291.6 Bacteria Bacteria COG1357@1,COG1357@2 NA|NA|NA S protein homooligomerization MAG.C3.5_01320 582744.Msip34_0661 4.2e-89 334.3 Nitrosomonadales nnr ko:K01420,ko:K10716 ko00000,ko02000,ko03000 1.A.1.1,1.A.1.13,1.A.1.17,1.A.1.24,1.A.1.25,1.A.1.6 Bacteria 1R6BV@1224,2KM08@206350,2VN3A@28216,COG0664@1,COG0664@2 NA|NA|NA K Bacterial regulatory proteins, crp family MAG.C3.5_01321 1101195.Meth11DRAFT_1773 0.0 1667.9 Nitrosomonadales aceE GO:0000287,GO:0003674,GO:0003824,GO:0004738,GO:0005488,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0019842,GO:0030976,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0055114,GO:0097159,GO:1901363,GO:1901681 1.2.4.1 ko:K00163 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200 M00307 R00014,R00209,R01699,R03270 RC00004,RC00027,RC00627,RC02742,RC02744,RC02882 br01601,ko00000,ko00001,ko00002,ko01000 e_coli_core.b0114,iAF1260.b0114,iBWG_1329.BWG_0107,iE2348C_1286.E2348C_0117,iEC55989_1330.EC55989_0107,iECDH10B_1368.ECDH10B_0094,iECDH1ME8569_1439.ECDH1ME8569_0108,iECH74115_1262.ECH74115_0121,iECIAI1_1343.ECIAI1_0112,iECNA114_1301.ECNA114_0106,iECO103_1326.ECO103_0114,iECO111_1330.ECO111_0115,iECO26_1355.ECO26_0116,iECSE_1348.ECSE_0114,iECSF_1327.ECSF_0127,iECSP_1301.ECSP_0115,iECUMN_1333.ECUMN_0111,iECW_1372.ECW_m0111,iECs_1301.ECs0118,iEKO11_1354.EKO11_3802,iETEC_1333.ETEC_0110,iEcDH1_1363.EcDH1_3488,iEcE24377_1341.EcE24377A_0116,iEcHS_1320.EcHS_A0118,iEcSMS35_1347.EcSMS35_0124,iEcolC_1368.EcolC_3545,iG2583_1286.G2583_0118,iJN746.PP_0339,iJO1366.b0114,iJR904.b0114,iUMNK88_1353.UMNK88_112,iWFL_1372.ECW_m0111,iY75_1357.Y75_RS00580,iZ_1308.Z0124 Bacteria 1MV21@1224,2KKET@206350,2VIAH@28216,COG2609@1,COG2609@2 NA|NA|NA C Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) MAG.C3.5_01331 582744.Msip34_0784 1e-65 256.1 Nitrosomonadales Bacteria 1MZIG@1224,2KP59@206350,2VK4J@28216,COG0673@1,COG0673@2 NA|NA|NA S Oxidoreductase family, NAD-binding Rossmann fold MAG.C3.5_01332 1165096.ARWF01000001_gene1718 1.6e-32 146.0 Nitrosomonadales GO:0005575,GO:0005576,GO:0005615,GO:0044421 Bacteria 1RD06@1224,2KN64@206350,2VSZ8@28216,COG2335@1,COG2335@2 NA|NA|NA M Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. MAG.C3.5_01333 1236959.BAMT01000006_gene352 3.3e-183 647.9 Nitrosomonadales ntrX Bacteria 1MU0N@1224,2KKE1@206350,2VKD8@28216,COG2204@1,COG2204@2 NA|NA|NA T PFAM response regulator receiver MAG.C3.5_01334 265072.Mfla_0182 6.1e-167 594.0 Nitrosomonadales ntrY Bacteria 1MWKZ@1224,2KKR4@206350,2VIDI@28216,COG5000@1,COG5000@2 NA|NA|NA T histidine kinase HAMP region domain protein MAG.C3.5_01335 1095769.CAHF01000013_gene3393 1.1e-135 490.0 Oxalobacteraceae Bacteria 1MVMG@1224,2VH3M@28216,475M3@75682,COG0457@1,COG0457@2,COG3914@1,COG3914@2 NA|NA|NA O Glycosyl transferase family 41 MAG.C3.5_01336 265072.Mfla_2224 6.8e-37 159.8 Nitrosomonadales Bacteria 1PJHU@1224,2A8KA@1,2KN46@206350,2W804@28216,30XNN@2 NA|NA|NA MAG.C3.5_01337 666681.M301_0527 5.7e-110 404.1 Nitrosomonadales pilD 3.4.23.43 ko:K02654 M00331 ko00000,ko00002,ko01000,ko01002,ko02035,ko02044 3.A.15.2 Bacteria 1MUZF@1224,2KKDG@206350,2VI08@28216,COG1989@1,COG1989@2 NA|NA|NA NOU Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue MAG.C3.5_01338 265072.Mfla_2226 1.4e-75 289.3 Nitrosomonadales coaE GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 ko:K00859 ko00770,ko01100,map00770,map01100 M00120 R00130 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 iECP_1309.ECP_0104 Bacteria 1RCXT@1224,2KMWF@206350,2VR8K@28216,COG0237@1,COG0237@2 NA|NA|NA H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A MAG.C3.5_01339 582744.Msip34_0507 4.6e-108 397.5 Nitrosomonadales zapD GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0007049,GO:0008150,GO:0009987,GO:0019954,GO:0022402,GO:0022414,GO:0032153,GO:0032505,GO:0042802,GO:0043093,GO:0044424,GO:0044444,GO:0044464,GO:0051301 ko:K18778 ko00000,ko03036 Bacteria 1MW69@1224,2KKRA@206350,2VIIG@28216,COG4582@1,COG4582@2 NA|NA|NA D Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity MAG.C3.5_01340 265072.Mfla_2228 1.1e-15 88.6 Nitrosomonadales yacG GO:0003674,GO:0004857,GO:0005488,GO:0008150,GO:0008270,GO:0008657,GO:0010911,GO:0030234,GO:0032780,GO:0042030,GO:0043086,GO:0043167,GO:0043169,GO:0043462,GO:0044092,GO:0046872,GO:0046914,GO:0050790,GO:0051336,GO:0051346,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0072586,GO:0098772,GO:2000371,GO:2000372 2.7.1.24 ko:K00859,ko:K09862 ko00770,ko01100,map00770,map01100 M00120 R00130 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 Bacteria 1NGJ8@1224,2KN8A@206350,2VXRV@28216,COG3024@1,COG3024@2 NA|NA|NA S Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase MAG.C3.5_01341 1165096.ARWF01000001_gene2121 5.8e-34 150.6 Nitrosomonadales ko:K09796 ko00000,ko03110 Bacteria 1N3BG@1224,2KN4H@206350,2VX2P@28216,COG2847@1,COG2847@2 NA|NA|NA S Copper chaperone PCu(A)C MAG.C3.5_01342 1236959.BAMT01000002_gene2177 6.6e-19 100.5 Nitrosomonadales Bacteria 1N26T@1224,2BWYA@1,2KNZC@206350,2VXGX@28216,32WXT@2 NA|NA|NA MAG.C3.5_01343 582744.Msip34_0504 1.8e-109 402.5 Nitrosomonadales mutT GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008413,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017110,GO:0030145,GO:0033554,GO:0034641,GO:0035539,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044715,GO:0044716,GO:0046483,GO:0046872,GO:0046914,GO:0047429,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 2.5.1.3,3.6.1.55,3.6.1.65 ko:K00788,ko:K03574,ko:K08320 ko00730,ko01100,map00730,map01100 M00127 R03223,R10712 RC00224,RC03255,RC03397 ko00000,ko00001,ko00002,ko01000,ko03400 iE2348C_1286.E2348C_0104,iSDY_1059.SDY_0129 Bacteria 1RCZM@1224,2KM02@206350,2VHTP@28216,COG0352@1,COG0352@2,COG0494@1,COG0494@2 NA|NA|NA HL Thiamine monophosphate synthase MAG.C3.5_01344 265072.Mfla_2231 3.1e-119 434.9 Nitrosomonadales MA20_41470 ko:K06923 ko00000 Bacteria 1MVMX@1224,2KKTH@206350,2VID5@28216,COG2607@1,COG2607@2 NA|NA|NA S Protein of unknown function (DUF815) MAG.C3.5_01345 582744.Msip34_0502 1.4e-183 649.0 Nitrosomonadales argJ GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35,2.7.2.8 ko:K00620,ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028 R00259,R02282,R02649 RC00002,RC00004,RC00043,RC00064 ko00000,ko00001,ko00002,ko01000 iLJ478.TM1783 Bacteria 1MU0T@1224,2KMBY@206350,2VJ84@28216,COG1364@1,COG1364@2 NA|NA|NA E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate MAG.C3.5_01346 580332.Slit_0536 0.0 1092.8 Nitrosomonadales gspE2 ko:K02652 ko00000,ko02035,ko02044 3.A.15.2 Bacteria 1MU7V@1224,2VHQ1@28216,44VNC@713636,COG2804@1,COG2804@2 NA|NA|NA NU General secretory system II protein E domain protein MAG.C3.5_01347 582744.Msip34_2262 0.0 2325.1 Nitrosomonadales glpCD 1.1.2.4,1.97.1.9 ko:K00102,ko:K12527 ko00450,ko00620,map00450,map00620 R00197,R07229 RC00044,RC02420 ko00000,ko00001,ko01000 Bacteria 1MU43@1224,2KKK3@206350,2VHYU@28216,COG0247@1,COG0247@2,COG0277@1,COG0277@2,COG0479@1,COG0479@2 NA|NA|NA C PFAM FAD linked oxidase domain protein MAG.C3.5_01348 1165096.ARWF01000001_gene1114 8.9e-55 219.9 Nitrosomonadales resA Bacteria 1RDGI@1224,2KMUP@206350,2VT2S@28216,COG0526@1,COG0526@2 NA|NA|NA CO SCO1/SenC MAG.C3.5_01349 1266925.JHVX01000003_gene430 1.1e-63 249.2 Nitrosomonadales ko:K08973 ko00000 Bacteria 1RHGS@1224,2VR5Y@28216,3737C@32003,COG1981@1,COG1981@2 NA|NA|NA S Uncharacterised protein family (UPF0093) MAG.C3.5_01350 1101195.Meth11DRAFT_0557 2.9e-54 218.8 Nitrosomonadales Bacteria 1PJHD@1224,2A8JX@1,2KN1Q@206350,2W7ZW@28216,30XN8@2 NA|NA|NA MAG.C3.5_01351 582744.Msip34_2267 2.2e-78 298.5 Nitrosomonadales Bacteria 1R67Z@1224,2KMDX@206350,2VUQ0@28216,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family MAG.C3.5_01352 1101195.Meth11DRAFT_0555 4.9e-144 517.3 Nitrosomonadales adoK GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004001,GO:0005488,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005975,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019200,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032552,GO:0032553,GO:0032554,GO:0032555,GO:0032559,GO:0032560,GO:0032561,GO:0032567,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046390,GO:0046483,GO:0046835,GO:0046872,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.15,2.7.1.20 ko:K00852,ko:K00856 ko00030,ko00230,ko01100,map00030,map00230,map01100 R00185,R01051,R02750 RC00002,RC00017 ko00000,ko00001,ko01000 iAF987.Gmet_2683 Bacteria 1PDQE@1224,2KM32@206350,2VHMF@28216,COG0524@1,COG0524@2 NA|NA|NA G pfkB family carbohydrate kinase MAG.C3.5_01353 582744.Msip34_2269 4e-46 191.0 Nitrosomonadales slyB ko:K06077 ko00000 Bacteria 1RJWY@1224,2KMTH@206350,2WE8P@28216,COG3133@1,COG3133@2 NA|NA|NA M PFAM 17 kDa surface antigen MAG.C3.5_01354 582744.Msip34_2270 4.5e-116 424.1 Nitrosomonadales Bacteria 1MWIM@1224,2KKWY@206350,2VH4B@28216,COG3176@1,COG3176@2 NA|NA|NA S Acetyltransferase (GNAT) domain MAG.C3.5_01355 582744.Msip34_2271 5.6e-85 320.9 Nitrosomonadales plsC 2.3.1.51 ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R02241,R09381 RC00004,RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1N2DG@1224,2KMKH@206350,2VSJD@28216,COG0204@1,COG0204@2 NA|NA|NA I Phosphate acyltransferases MAG.C3.5_01356 582744.Msip34_2272 5.1e-108 397.5 Nitrosomonadales apaH GO:0003674,GO:0003824,GO:0004551,GO:0004721,GO:0006139,GO:0006464,GO:0006470,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008138,GO:0008150,GO:0008152,GO:0008796,GO:0008803,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0015949,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0019538,GO:0034641,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0046483,GO:0050896,GO:0055086,GO:0071704,GO:0140096,GO:1901360,GO:1901564 3.6.1.41 ko:K01525 ko00230,map00230 R00125 RC00002 ko00000,ko00001,ko01000 iECIAI39_1322.ECIAI39_0052,iEcSMS35_1347.EcSMS35_0053,iJN746.PP_0399,iSDY_1059.SDY_0074 Bacteria 1MV10@1224,2KKMZ@206350,2VHV6@28216,COG0639@1,COG0639@2 NA|NA|NA T Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP MAG.C3.5_01357 582744.Msip34_2273 4.8e-61 240.7 Nitrosomonadales Bacteria 1MZBZ@1224,2KN03@206350,2VMBB@28216,COG3245@1,COG3245@2 NA|NA|NA C PFAM Cytochrome C MAG.C3.5_01359 1101195.Meth11DRAFT_0501 3.3e-121 441.4 Nitrosomonadales ctaB GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008495,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 ko:K02257 ko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714 M00154 R07411 RC01786 ko00000,ko00001,ko00002,ko01000,ko01006,ko03029 iJN746.PP_0110 Bacteria 1MW3S@1224,2KM3K@206350,2VHZU@28216,COG0109@1,COG0109@2 NA|NA|NA O Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group MAG.C3.5_01360 666681.M301_2282 2.7e-119 435.3 Nitrosomonadales ctaA ko:K02259,ko:K03110 ko00190,ko00860,ko01100,ko01110,ko02020,ko02024,ko03060,ko03070,ko04714,map00190,map00860,map01100,map01110,map02020,map02024,map03060,map03070,map04714 M00154,M00335 R07412 RC00769 ko00000,ko00001,ko00002,ko02044,ko03029 3.A.5.1,3.A.5.2,3.A.5.7,3.D.4.4 Bacteria 1MVJ4@1224,2KMJI@206350,2VJ3C@28216,COG1612@1,COG1612@2 NA|NA|NA O PFAM Cytochrome oxidase assembly MAG.C3.5_01361 1165096.ARWF01000001_gene1126 1.5e-48 199.5 Nitrosomonadales VVA1110 Bacteria 1N6R6@1224,2KMZH@206350,2VXI0@28216,COG1999@1,COG1999@2 NA|NA|NA S signal sequence binding MAG.C3.5_01362 582744.Msip34_1210 7.7e-63 247.3 Nitrosomonadales surf1 GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0030312,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0051704,GO:0071944 ko:K14998 ko00000,ko03029 3.D.4.8 Bacteria 1MZUH@1224,2KN59@206350,2VSAZ@28216,COG3346@1,COG3346@2 NA|NA|NA S SURF1 family MAG.C3.5_01363 666681.M301_2285 6.3e-12 76.3 Nitrosomonadales VL23_10685 Bacteria 1NH9B@1224,2EGIJ@1,2KNAK@206350,2W81A@28216,33AAQ@2 NA|NA|NA S Protein of unknown function (DUF2909) MAG.C3.5_01364 1132855.KB913035_gene2289 5.3e-132 477.2 Nitrosomonadales ctaE GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 1.9.3.1 ko:K02276 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.4,3.D.4.6 iJN678.ctaE Bacteria 1MUCK@1224,2KMDS@206350,2VJAP@28216,COG1845@1,COG1845@2 NA|NA|NA C PFAM cytochrome c oxidase subunit III MAG.C3.5_01365 1132855.KB913035_gene2288 2.7e-62 245.0 Nitrosomonadales ctaG GO:0008150,GO:0008535,GO:0009987,GO:0016043,GO:0017004,GO:0022607,GO:0034622,GO:0043933,GO:0044085,GO:0065003,GO:0071840 ko:K02258 ko00190,ko01100,ko04714,map00190,map01100,map04714 M00154 ko00000,ko00001,ko00002,ko03029 3.D.4.8 Bacteria 1RDTU@1224,2KMKF@206350,2VHRQ@28216,COG3175@1,COG3175@2 NA|NA|NA O PFAM Cytochrome c oxidase assembly protein CtaG Cox11 MAG.C3.5_01366 1101195.Meth11DRAFT_0494 4.4e-294 1016.5 Nitrosomonadales 1.9.3.1 ko:K02274 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.2,3.D.4.3,3.D.4.4,3.D.4.6 Bacteria 1MU7S@1224,2KKYM@206350,2VHGU@28216,COG0843@1,COG0843@2 NA|NA|NA C Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B MAG.C3.5_01367 582744.Msip34_1216 2.9e-178 631.3 Nitrosomonadales ctaC GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0040007,GO:0042773,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044121,GO:0044237,GO:0044238,GO:0044281,GO:0044403,GO:0044419,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0051704,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.9.3.1 ko:K02275 ko00190,ko01100,map00190,map01100 M00155 R00081 RC00016 ko00000,ko00001,ko00002,ko01000 3.D.4.2,3.D.4.4,3.D.4.6 Bacteria 1MWHZ@1224,2KM4R@206350,2VH9M@28216,COG1622@1,COG1622@2,COG2010@1,COG2010@2 NA|NA|NA C Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) MAG.C3.5_01368 582744.Msip34_1217 2e-33 148.7 Nitrosomonadales Bacteria 1N5Z9@1224,2KN5A@206350,2VU1W@28216,COG5488@1,COG5488@2 NA|NA|NA S Integral membrane protein (DUF2244) MAG.C3.5_01370 265072.Mfla_0423 5.4e-136 490.7 Nitrosomonadales queA GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009314,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046483,GO:0050896,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29,2.4.99.17 ko:K00773,ko:K07568 R03789,R10209 RC00063 ko00000,ko01000,ko03016 Bacteria 1MUH3@1224,2KKJW@206350,2VHJF@28216,COG0809@1,COG0809@2 NA|NA|NA J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) MAG.C3.5_01371 1112274.KI911560_gene564 5.4e-108 397.5 Nitrosomonadales ko:K20276 ko02024,map02024 ko00000,ko00001 Bacteria 1NRNR@1224,2KM2F@206350,2W165@28216,COG3391@1,COG3391@2 NA|NA|NA S amine dehydrogenase activity MAG.C3.5_01372 1165096.ARWF01000001_gene1135 4.1e-47 194.5 Nitrosomonadales Bacteria 1N035@1224,2DNBK@1,2KNGR@206350,2VVXR@28216,32WMY@2 NA|NA|NA S Protein of unknown function (DUF1097) MAG.C3.5_01373 582744.Msip34_2278 4.9e-81 307.4 Nitrosomonadales ko:K08307 ko00000,ko01000,ko01011 Bacteria 1R666@1224,2KKV2@206350,2VHI4@28216,COG0741@1,COG0741@2 NA|NA|NA M Transglycosylase SLT domain MAG.C3.5_01374 1236959.BAMT01000005_gene97 7.2e-274 949.5 Nitrosomonadales proS GO:0002161,GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0043906,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 ko:K01881 ko00970,map00970 M00359,M00360 R03661 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iJN678.proS,iUTI89_1310.UTI89_C0210 Bacteria 1MU7E@1224,2KKEY@206350,2VGZ9@28216,COG0442@1,COG0442@2 NA|NA|NA J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS MAG.C3.5_01375 582744.Msip34_2280 1e-56 226.5 Nitrosomonadales Bacteria 1N74F@1224,2CDCV@1,2KMRH@206350,2VSMP@28216,308Y1@2 NA|NA|NA MAG.C3.5_01376 264198.Reut_C6200 6.4e-42 177.2 Burkholderiaceae Z012_08985 ko:K08988 ko00000 Bacteria 1K75J@119060,1R61N@1224,2VRJE@28216,COG3762@1,COG3762@2 NA|NA|NA S TPM domain MAG.C3.5_01377 1236959.BAMT01000005_gene93 7.4e-75 287.3 Nitrosomonadales ko:K06872 ko00000 Bacteria 1PB41@1224,2KKKF@206350,2VMNV@28216,COG1512@1,COG1512@2 NA|NA|NA S TPM domain MAG.C3.5_01378 582744.Msip34_2283 1.6e-84 318.9 Nitrosomonadales lemA ko:K03744 ko00000 Bacteria 1MVH0@1224,2KKPP@206350,2VHT5@28216,COG1704@1,COG1704@2 NA|NA|NA S PFAM LemA family MAG.C3.5_01379 582744.Msip34_2284 1.3e-98 366.3 Betaproteobacteria dpo 3.2.2.27 ko:K21929 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1MWX1@1224,2VPZQ@28216,COG1573@1,COG1573@2 NA|NA|NA L uracil-DNA glycosylase MAG.C3.5_01380 265072.Mfla_0413 3.4e-55 221.1 Nitrosomonadales rimI GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008999,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0017189,GO:0018193,GO:0018194,GO:0019538,GO:0031365,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564 2.3.1.128,2.3.1.234 ko:K01409,ko:K03789,ko:K14742 R10648 RC00070,RC00416 ko00000,ko01000,ko03009,ko03016 Bacteria 1RIE6@1224,2KMVP@206350,2VUIW@28216,COG0454@1,COG0456@2 NA|NA|NA K This enzyme acetylates the N-terminal alanine of ribosomal protein S18 MAG.C3.5_01381 582744.Msip34_2286 7.1e-72 277.3 Nitrosomonadales yeaZ GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0030312,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0071944,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 ko:K01409,ko:K14742 R10648 RC00070,RC00416 ko00000,ko01000,ko03016 Bacteria 1MXPH@1224,2KMK0@206350,2VQR7@28216,COG1214@1,COG1214@2 NA|NA|NA O Glycoprotease family MAG.C3.5_01382 1122604.JONR01000061_gene2112 8.6e-82 310.5 Xanthomonadales wbxY Bacteria 1MY5B@1224,1RRVD@1236,1X6GP@135614,2C1VH@1,2Z7Z3@2 NA|NA|NA S 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase MAG.C3.5_01384 1235457.C404_24280 1.5e-28 131.7 Burkholderiaceae ypeB 2.7.7.7 ko:K02342,ko:K09954,ko:K10857 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1K9BT@119060,1N7GT@1224,2VW2G@28216,COG3530@1,COG3530@2 NA|NA|NA S Putative quorum-sensing-regulated virulence factor MAG.C3.5_01385 748247.AZKH_4524 1.6e-19 104.8 Rhodocyclales avxIA Bacteria 1MU7T@1224,2KZTM@206389,2VNQ5@28216,COG2931@1,COG2931@2 NA|NA|NA Q Haemolysin-type calcium-binding repeat (2 copies) MAG.C3.5_01387 582744.Msip34_2300 9.3e-235 819.3 Nitrosomonadales dinG GO:0003674,GO:0003824,GO:0004386,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008026,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0070035,GO:0071704,GO:0071944,GO:0090304,GO:1901360 3.6.4.12 ko:K03722 ko00000,ko01000,ko03400 Bacteria 1MVCU@1224,2KKUU@206350,2VH0V@28216,COG1199@1,COG1199@2 NA|NA|NA L HELICc2 MAG.C3.5_01388 666681.M301_1123 5.3e-113 414.1 Nitrosomonadales fbp GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0071704,GO:1901135,GO:1901576 3.1.3.11 ko:K03841 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko04152,ko04910,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map04152,map04910 M00003,M00165,M00167,M00344 R00762,R04780 RC00017 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1MW0E@1224,2KKT0@206350,2VIJT@28216,COG0158@1,COG0158@2 NA|NA|NA G D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 MAG.C3.5_01391 582744.Msip34_1029 2.3e-16 92.4 Nitrosomonadales pilO ko:K02664,ko:K02665 ko00000,ko02035,ko02044 Bacteria 1PIST@1224,2KNCJ@206350,2W61Q@28216,COG3167@1,COG3167@2 NA|NA|NA NU carbon utilization MAG.C3.5_01392 666681.M301_0465 1.3e-11 76.6 Betaproteobacteria Bacteria 1N89J@1224,2E5FR@1,2VVS4@28216,3307F@2 NA|NA|NA MAG.C3.5_01393 582744.Msip34_1031 7.1e-153 547.7 Nitrosomonadales pulQ ko:K02453,ko:K07280,ko:K20444,ko:K20543 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko01000,ko01005,ko02000,ko02044 1.B.55.3,3.A.15,4.D.1.3 GT2,GT4 Bacteria 1QUY7@1224,2KKT1@206350,2VJ8Z@28216,COG3118@1,COG3118@2,COG4796@1,COG4796@2 NA|NA|NA U type II and III secretion system protein MAG.C3.5_01394 1123368.AUIS01000016_gene2545 9.2e-46 189.9 Gammaproteobacteria ko:K02456 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1QVCD@1224,1T58B@1236,COG4968@1,COG4968@2 NA|NA|NA NU Prokaryotic N-terminal methylation motif MAG.C3.5_01395 1149133.ppKF707_1130 1.4e-36 159.1 Pseudomonas aeruginosa group oxpG ko:K02456 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1N1QJ@1224,1S8T4@1236,1YJSK@136841,COG2165@1,COG2165@2 NA|NA|NA NU Prokaryotic N-terminal methylation motif MAG.C3.5_01396 1165096.ARWF01000001_gene1943 8.7e-40 170.6 Nitrosomonadales Bacteria 1MZ5I@1224,2KN2E@206350,2VTYM@28216,COG2165@1,COG2165@2 NA|NA|NA NU Type II secretory pathway, pseudopilin MAG.C3.5_01397 265072.Mfla_2410 4.2e-35 154.8 Nitrosomonadales ltg Bacteria 1MZ4X@1224,2KMXE@206350,2VKFN@28216,COG0741@1,COG0741@2 NA|NA|NA M PFAM Lytic transglycosylase catalytic MAG.C3.5_01398 582744.Msip34_0082 8.8e-162 576.6 Nitrosomonadales pilC2 ko:K02455,ko:K02653 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02035,ko02044 3.A.15,3.A.15.2 Bacteria 1MV4U@1224,2KKSQ@206350,2VI1J@28216,COG1459@1,COG1459@2 NA|NA|NA NU PFAM type II secretion system MAG.C3.5_01399 1165096.ARWF01000001_gene1419 2.3e-277 961.1 Nitrosomonadales xcpR 4.6.1.1 ko:K01768,ko:K02454,ko:K02652 ko00230,ko02025,ko03070,ko04113,ko04213,ko05111,map00230,map02025,map03070,map04113,map04213,map05111 M00331,M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000,ko02035,ko02044 3.A.15,3.A.15.2 Bacteria 1MU7V@1224,2KKZR@206350,2VHQ1@28216,COG2804@1,COG2804@2 NA|NA|NA NU General secretory system II protein E domain protein MAG.C3.5_01400 582744.Msip34_0080 7.8e-66 258.1 Bacteria trxA ko:K03671,ko:K05838 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 iIT341.HP0824 Bacteria COG3118@1,COG3118@2 NA|NA|NA O belongs to the thioredoxin family MAG.C3.5_01401 1101195.Meth11DRAFT_0140 1.1e-201 709.9 Nitrosomonadales outD ko:K02453,ko:K12282 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1MVNC@1224,2KKGD@206350,2VMT1@28216,COG1450@1,COG1450@2 NA|NA|NA NU type II and III secretion system protein MAG.C3.5_01402 1165096.ARWF01000001_gene1422 2.2e-150 539.3 Nitrosomonadales exeA1 ko:K12283 ko00000,ko02044 Bacteria 1MU3G@1224,2KKBN@206350,2VMD2@28216,COG3267@1,COG3267@2 NA|NA|NA U PFAM Sporulation domain protein MAG.C3.5_01403 265072.Mfla_0074 1.2e-210 739.2 Nitrosomonadales ko:K07712 ko02020,map02020 M00497 ko00000,ko00001,ko00002,ko02022 Bacteria 1MU0N@1224,2KMCT@206350,2VNYV@28216,COG2204@1,COG2204@2 NA|NA|NA T PFAM sigma-54 factor interaction domain-containing protein MAG.C3.5_01407 582744.Msip34_0076 1e-124 453.0 Nitrosomonadales folD GO:0003674,GO:0003824,GO:0004477,GO:0004486,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0019752,GO:0034641,GO:0042558,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0055114,GO:0071704,GO:1901360,GO:1901564 1.5.1.5,3.5.4.9 ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00377 R01220,R01655 RC00202,RC00578 ko00000,ko00001,ko00002,ko01000 Bacteria 1MWU4@1224,2KM3C@206350,2VI8C@28216,COG0190@1,COG0190@2 NA|NA|NA H Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate MAG.C3.5_01408 582744.Msip34_0075 1.2e-70 272.3 Nitrosomonadales dksA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K06204 ko02026,map02026 ko00000,ko00001,ko03000,ko03009,ko03021 Bacteria 1RD08@1224,2KMKT@206350,2VRPJ@28216,COG1734@1,COG1734@2 NA|NA|NA T Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters MAG.C3.5_01409 582744.Msip34_0074 0.0 1241.1 Nitrosomonadales pnp GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 ko:K00962 ko00230,ko00240,ko03018,map00230,map00240,map03018 M00394 R00437,R00438,R00439,R00440 RC02795 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 Bacteria 1MVB9@1224,2KMDT@206350,2VI1P@28216,COG1185@1,COG1185@2 NA|NA|NA J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction MAG.C3.5_01410 1132855.KB913035_gene2631 4.1e-35 153.7 Nitrosomonadales rpsO GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031123,GO:0031124,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02956 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1MZ2W@1224,2KN40@206350,2VU1D@28216,COG0184@1,COG0184@2 NA|NA|NA J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome MAG.C3.5_01411 1165096.ARWF01000001_gene1428 2.2e-120 438.7 Nitrosomonadales truB GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 ko:K03177 ko00000,ko01000,ko03016 Bacteria 1MV0N@1224,2KKM9@206350,2VH97@28216,COG0130@1,COG0130@2 NA|NA|NA J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs MAG.C3.5_01412 582744.Msip34_0071 8.2e-47 193.0 Nitrosomonadales rbfA GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030490,GO:0033554,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043021,GO:0043024,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071840,GO:0090304,GO:1901360 ko:K02834 ko00000,ko03009 Bacteria 1MZPE@1224,2KMXN@206350,2VR43@28216,COG0858@1,COG0858@2 NA|NA|NA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA MAG.C3.5_01413 582744.Msip34_0070 0.0 1320.8 Nitrosomonadales infB GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034645,GO:0036094,GO:0043021,GO:0043024,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02519 ko00000,ko03012,ko03029 Bacteria 1MV26@1224,2KKNG@206350,2VK2H@28216,COG0532@1,COG0532@2 NA|NA|NA J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex MAG.C3.5_01414 582744.Msip34_0069 4.3e-235 820.5 Nitrosomonadales nusA GO:0001000,GO:0001121,GO:0001125,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0019904,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043175,GO:0043244,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070063,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 ko:K02600 ko00000,ko03009,ko03021 Bacteria 1MWT7@1224,2KKJJ@206350,2VH2X@28216,COG0195@1,COG0195@2 NA|NA|NA K Participates in both transcription termination and antitermination MAG.C3.5_01415 265072.Mfla_0065 3.3e-58 231.1 Nitrosomonadales rimP GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576 ko:K09748 ko00000,ko03009 Bacteria 1RDP2@1224,2KMM1@206350,2VSRT@28216,COG0779@1,COG0779@2 NA|NA|NA J Required for maturation of 30S ribosomal subunits MAG.C3.5_01417 543728.Vapar_4487 1.3e-39 169.1 Comamonadaceae oxc GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006082,GO:0008150,GO:0008152,GO:0008949,GO:0009056,GO:0009268,GO:0009628,GO:0009987,GO:0010447,GO:0016054,GO:0016829,GO:0016830,GO:0016831,GO:0017076,GO:0019752,GO:0019842,GO:0030554,GO:0030976,GO:0032553,GO:0032555,GO:0032559,GO:0033609,GO:0033611,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043531,GO:0043648,GO:0043649,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0046872,GO:0048037,GO:0050662,GO:0050896,GO:0051716,GO:0071214,GO:0071467,GO:0071468,GO:0071704,GO:0097159,GO:0097367,GO:0104004,GO:1901265,GO:1901363,GO:1901575,GO:1901681 4.1.1.8 ko:K01577 ko00630,ko01100,map00630,map01100 R01908 RC00620 ko00000,ko00001,ko01000 iEcSMS35_1347.EcSMS35_2523 Bacteria 1MXDW@1224,2VHRD@28216,4ABWV@80864,COG0028@1,COG0028@2 NA|NA|NA EH Belongs to the TPP enzyme family MAG.C3.5_01418 582744.Msip34_1521 1.9e-190 671.8 Nitrosomonadales cysN GO:0000103,GO:0003674,GO:0003824,GO:0004020,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006790,GO:0006793,GO:0006796,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009336,GO:0009605,GO:0009987,GO:0009991,GO:0010134,GO:0010438,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019419,GO:0031667,GO:0031668,GO:0031669,GO:0032991,GO:0033554,GO:0034599,GO:0040007,GO:0042221,GO:0042594,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0061695,GO:0070887,GO:0071496,GO:0071944,GO:1902494,GO:1902503,GO:1990234 2.7.1.25,2.7.7.4 ko:K00955,ko:K00956 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 M00176,M00596 R00509,R00529,R04928,R04929 RC00002,RC00078,RC02809,RC02889 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUD9@1224,2KKI9@206350,2VHYV@28216,COG2895@1,COG2895@2 NA|NA|NA P Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily MAG.C3.5_01419 1387312.BAUS01000002_gene733 6.2e-54 216.5 Nitrosomonadales fdxA ko:K05524 ko00000 Bacteria 1RH5I@1224,2KN07@206350,2VSJ0@28216,COG1146@1,COG1146@2 NA|NA|NA C Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions MAG.C3.5_01420 748247.AZKH_4524 1.3e-16 94.4 Rhodocyclales avxIA Bacteria 1MU7T@1224,2KZTM@206389,2VNQ5@28216,COG2931@1,COG2931@2 NA|NA|NA Q Haemolysin-type calcium-binding repeat (2 copies) MAG.C3.5_01421 1502770.JQMG01000001_gene2122 2.1e-152 545.4 Nitrosomonadales bcr ko:K07552 ko00000,ko02000 2.A.1.2 Bacteria 1MW19@1224,2KM4Z@206350,2VHTW@28216,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily MAG.C3.5_01422 626418.bglu_1g16460 4.4e-88 331.3 Burkholderiaceae Bacteria 1K6ED@119060,1RIYU@1224,2VWI0@28216,COG2520@1,COG2520@2 NA|NA|NA J FkbM family MAG.C3.5_01423 582744.Msip34_1525 5.3e-220 770.0 Nitrosomonadales pqqE ko:K06139 ko00000 Bacteria 1MUQP@1224,2KMCY@206350,2VIK6@28216,COG0535@1,COG0535@2 NA|NA|NA S TIGRFAM coenzyme PQQ biosynthesis protein E MAG.C3.5_01424 582744.Msip34_1526 1.8e-33 148.3 Nitrosomonadales pqqD ko:K06138 ko00000 Bacteria 1N7JR@1224,2E4CK@1,2KN6H@206350,2VVSC@28216,32Z81@2 NA|NA|NA S PFAM coenzyme PQQ synthesis MAG.C3.5_01425 1387312.BAUS01000012_gene2116 1.5e-135 488.8 Nitrosomonadales pqqC 1.3.3.11 ko:K06137 ko00000,ko01000 Bacteria 1MW7G@1224,2KMD0@206350,2VI0X@28216,COG5424@1,COG5424@2 NA|NA|NA H Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ MAG.C3.5_01426 1236959.BAMT01000001_gene1440 1.7e-157 562.0 Nitrosomonadales pqqB GO:0006082,GO:0006464,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0018130,GO:0018189,GO:0018193,GO:0018212,GO:0019538,GO:0019752,GO:0034641,GO:0036211,GO:0042180,GO:0042181,GO:0042364,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072350,GO:0072351,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901661,GO:1901663 3.1.4.55 ko:K06136,ko:K06167 ko00440,map00440 R10205 RC00296 ko00000,ko00001,ko01000 Bacteria 1MWI5@1224,2KM3R@206350,2VJUF@28216,COG1235@1,COG1235@2 NA|NA|NA S May be involved in the transport of PQQ or its precursor to the periplasm MAG.C3.5_01427 1236959.BAMT01000001_gene1439 7.9e-157 560.1 Nitrosomonadales hisC 2.6.1.9 ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 M00026 R00694,R00734,R03243 RC00006,RC00888 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1MW7I@1224,2KKY8@206350,2VIPQ@28216,COG0079@1,COG0079@2 NA|NA|NA E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily MAG.C3.5_01428 582744.Msip34_1532 2.2e-122 445.7 Nitrosomonadales Bacteria 1QTQM@1224,2KNPY@206350,2W1IR@28216,COG2199@1,COG2199@2 NA|NA|NA T diguanylate cyclase MAG.C3.5_01429 582744.Msip34_1533 1.3e-85 322.8 Nitrosomonadales pheA GO:0003674,GO:0003824,GO:0004106,GO:0004664,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006558,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0017144,GO:0019438,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 1.3.1.12,2.3.1.79,4.2.1.51,4.2.1.91,5.4.99.5 ko:K00661,ko:K01713,ko:K04092,ko:K04093,ko:K04516,ko:K04518,ko:K14170,ko:K14187 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 M00024,M00025 R00691,R01373,R01715,R01728 RC00125,RC00360,RC03116 ko00000,ko00001,ko00002,ko01000 iECNA114_1301.ECNA114_2667 Bacteria 1MU60@1224,2KKEH@206350,2VJEV@28216,COG0077@1,COG0077@2,COG1605@1,COG1605@2 NA|NA|NA E amino acid-binding ACT domain protein MAG.C3.5_01430 265072.Mfla_2536 5.3e-42 177.2 Nitrosomonadales kdtA 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 ko:K02527 ko00540,ko01100,map00540,map01100 M00060,M00080 R04658,R05074,R09763 RC00009,RC00077,RC00247 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 GT30 iIT341.HP0957 Bacteria 1MU9F@1224,2KKK9@206350,2VI67@28216,COG1519@1,COG1519@2 NA|NA|NA M PFAM Three-deoxy-D-manno-octulosonic-acid transferase domain protein MAG.C3.5_01431 1101195.Meth11DRAFT_2456 1e-202 713.4 Nitrosomonadales Bacteria 1MU2C@1224,2KKKT@206350,2VKCJ@28216,COG5001@1,COG5001@2 NA|NA|NA T Periplasmic sensor domain MAG.C3.5_01432 1101195.Meth11DRAFT_2457 4.3e-33 147.9 Nitrosomonadales Bacteria 1N6WD@1224,2E3CB@1,2KNCV@206350,2WATE@28216,32YBM@2 NA|NA|NA S Domain of unknown function (DUF4154) MAG.C3.5_01433 1101195.Meth11DRAFT_2458 4.1e-233 814.3 Nitrosomonadales ko:K02014 ko00000,ko02000 1.B.14 Bacteria 1QTTF@1224,2KKYJ@206350,2VMKQ@28216,COG4206@1,COG4206@2 NA|NA|NA H TonB-dependent Receptor Plug MAG.C3.5_01434 1502770.JQMG01000001_gene875 5.8e-60 237.3 Nitrosomonadales pncA Bacteria 1MU5N@1224,2KMRA@206350,2VUBT@28216,COG1335@1,COG1335@2 NA|NA|NA Q Isochorismatase family MAG.C3.5_01435 1236959.BAMT01000008_gene2471 5e-150 537.7 Nitrosomonadales tolC ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821 ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 1.B.17,2.A.6.2 Bacteria 1MWCJ@1224,2KKGH@206350,2VHG1@28216,COG1538@1,COG1538@2 NA|NA|NA MU TIGRFAM type I secretion outer membrane protein, TolC family MAG.C3.5_01436 1236959.BAMT01000008_gene2466 7e-76 290.4 Nitrosomonadales 2.1.1.77 ko:K00573 ko00000,ko01000 Bacteria 1RD6S@1224,2KMN7@206350,2VJX3@28216,COG2518@1,COG2518@2 NA|NA|NA O PFAM protein-L-isoaspartate(D-aspartate) O-methyltransferase MAG.C3.5_01437 395493.BegalDRAFT_1215 3.3e-47 194.5 Gammaproteobacteria mchD Bacteria 1RIIR@1224,1T129@1236,COG5528@1,COG5528@2 NA|NA|NA S integral membrane protein MAG.C3.5_01438 640081.Dsui_0408 0.0 1140.6 Rhodocyclales czcA ko:K18303 M00642 ko00000,ko00002,ko01504,ko02000 2.A.6.2.17 Bacteria 1MU48@1224,2KUT5@206389,2VHZQ@28216,COG0841@1,COG0841@2 NA|NA|NA V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family MAG.C3.5_01439 583345.Mmol_0207 3.6e-140 505.4 Nitrosomonadales ko:K07221 ko00000,ko02000 1.B.5.1 Bacteria 1R9AP@1224,2KNN1@206350,2W0HU@28216,COG3746@1,COG3746@2 NA|NA|NA P PFAM phosphate-selective porin O and P MAG.C3.5_01440 583345.Mmol_0206 1.1e-162 579.3 Nitrosomonadales sbp ko:K02048 ko00920,ko02010,map00920,map02010 M00185 ko00000,ko00001,ko00002,ko02000 3.A.1.6.1,3.A.1.6.3 Bacteria 1MUAU@1224,2KKVC@206350,2VIQZ@28216,COG1613@1,COG1613@2 NA|NA|NA P TIGRFAM sulfate ABC transporter, periplasmic sulfate-binding protein MAG.C3.5_01441 666681.M301_0886 2.7e-69 268.5 Nitrosomonadales dhaL GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006793,GO:0006796,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0046872,GO:0047324,GO:0097159,GO:0097367,GO:1901265,GO:1901363 2.7.1.121 ko:K05879 ko00561,ko01100,map00561,map01100 R01012 RC00015,RC00017 ko00000,ko00001,ko01000 Bacteria 1MXIB@1224,2KMMU@206350,2VT3G@28216,COG1461@1,COG1461@2 NA|NA|NA S Dak2 MAG.C3.5_01442 265072.Mfla_2252 1.7e-175 622.1 Nitrosomonadales argA GO:0003674,GO:0003824,GO:0003991,GO:0004042,GO:0004358,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016407,GO:0016410,GO:0016597,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.7.2.8 ko:K00619,ko:K00930,ko:K14682 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028 R00259,R02649 RC00002,RC00004,RC00043,RC00064 ko00000,ko00001,ko00002,ko01000 iECP_1309.ECP_2830,iLF82_1304.LF82_0116,iNRG857_1313.NRG857_13920,iYL1228.KPN_03226 Bacteria 1MUUP@1224,2KKM3@206350,2VGZC@28216,COG0548@1,COG0548@2,COG1246@1,COG1246@2,COG1396@1,COG1396@2 NA|NA|NA E Belongs to the acetyltransferase family. ArgA subfamily MAG.C3.5_01443 1323663.AROI01000024_gene1572 1.8e-91 342.8 Gammaproteobacteria metXA 2.3.1.31 ko:K00641 ko00270,ko01100,ko01130,map00270,map01100,map01130 R01776 RC00004,RC00041 ko00000,ko00001,ko01000 Bacteria 1MVJV@1224,1RQ2N@1236,COG2021@1,COG2021@2 NA|NA|NA E Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine MAG.C3.5_01444 666681.M301_2094 1e-92 347.4 Nitrosomonadales pleD Bacteria 1R7HC@1224,2KNFU@206350,2VH1X@28216,COG2199@1,COG3447@1,COG3447@2,COG3706@2 NA|NA|NA T diguanylate cyclase MAG.C3.5_01447 582744.Msip34_0213 4.8e-41 174.1 Nitrosomonadales ko:K17226,ko:K17227 ko00920,ko01100,ko01120,map00920,map01100,map01120 M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002 Bacteria 1RH4J@1224,2KMXS@206350,2VT8I@28216,COG5501@1,COG5501@2 NA|NA|NA S Sulfur oxidation protein SoxY MAG.C3.5_01448 582744.Msip34_0212 1.8e-161 575.9 Nitrosomonadales bepA GO:0003674,GO:0003756,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005575,GO:0005623,GO:0006457,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016043,GO:0016787,GO:0016853,GO:0016860,GO:0016864,GO:0019538,GO:0022607,GO:0030163,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043163,GO:0043165,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044091,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044464,GO:0045229,GO:0046872,GO:0051603,GO:0061024,GO:0061077,GO:0070011,GO:0071704,GO:0071709,GO:0071840,GO:0140096,GO:1901564,GO:1901565,GO:1901575 Bacteria 1MVFV@1224,2KKM5@206350,2VHAY@28216,COG4783@1,COG4783@2 NA|NA|NA S Peptidase family M48 MAG.C3.5_01449 265072.Mfla_0199 1.8e-62 245.4 Nitrosomonadales moaC 4.6.1.17 ko:K03637 ko00790,ko01100,ko04122,map00790,map01100,map04122 R11372 RC03425 ko00000,ko00001,ko01000 Bacteria 1RCYZ@1224,2KMT6@206350,2VR7B@28216,COG0315@1,COG0315@2 NA|NA|NA H Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) MAG.C3.5_01451 1101195.Meth11DRAFT_1641 1.2e-60 239.2 Nitrosomonadales yaiI ko:K09768 ko00000 Bacteria 1RCZA@1224,2KMR2@206350,2VRAZ@28216,COG1671@1,COG1671@2 NA|NA|NA S Uncharacterized BCR, YaiI/YqxD family COG1671 MAG.C3.5_01452 159087.Daro_3556 2.1e-223 781.9 Rhodocyclales kup ko:K03549 ko00000,ko02000 2.A.72 Bacteria 1MUVH@1224,2KUQJ@206389,2VH9I@28216,COG3158@1,COG3158@2 NA|NA|NA P Transport of potassium into the cell MAG.C3.5_01453 402626.Rpic_3370 2.1e-83 315.5 Burkholderiaceae Bacteria 1K29G@119060,1MWZ5@1224,2VIM1@28216,COG0745@1,COG0745@2 NA|NA|NA KT response regulator MAG.C3.5_01454 159087.Daro_3558 3.1e-119 435.6 Rhodocyclales Bacteria 1MUZQ@1224,2KV3X@206389,2VH62@28216,COG0642@1,COG2205@2 NA|NA|NA T PhoQ Sensor MAG.C3.5_01455 583345.Mmol_1506 8.7e-74 283.1 Nitrosomonadales blc GO:0005575,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0033554,GO:0044462,GO:0044464,GO:0050896,GO:0051716,GO:0071944 ko:K03098,ko:K07071 ko00000,ko04147 Bacteria 1RDAI@1224,2KMSV@206350,2VRSU@28216,COG3040@1,COG3040@2 NA|NA|NA M Lipocalin / cytosolic fatty-acid binding protein family MAG.C3.5_01456 395961.Cyan7425_0280 1.3e-64 253.4 Cyanothece Bacteria 1G12U@1117,3KJ6J@43988,COG2199@1,COG2199@2,COG2203@1,COG2203@2 NA|NA|NA T diguanylate cyclase MAG.C3.5_01457 666681.M301_1600 5e-82 311.2 Nitrosomonadales 2.3.1.57 ko:K00657,ko:K09973 ko00330,ko01100,ko04216,map00330,map01100,map04216 M00135 R01154 RC00004,RC00096 ko00000,ko00001,ko00002,ko01000 Bacteria 1RBFT@1224,2KMCM@206350,2VTX0@28216,COG3735@1,COG3735@2 NA|NA|NA S TraB family MAG.C3.5_01458 582744.Msip34_1117 0.0 1306.2 Nitrosomonadales ygiQ Bacteria 1MUG3@1224,2KMJF@206350,2VJ9A@28216,COG1032@1,COG1032@2 NA|NA|NA C Radical SAM N-terminal MAG.C3.5_01459 582744.Msip34_1111 3e-199 701.8 Betaproteobacteria Bacteria 1NWNJ@1224,2WHI5@28216,COG2199@1,COG2199@2,COG2202@1,COG2202@2 NA|NA|NA T PAS domain containing protein MAG.C3.5_01460 666681.M301_1603 8.1e-220 769.6 Nitrosomonadales copA 1.16.3.3 ko:K22348 ko00000,ko01000 Bacteria 1MU0J@1224,2KMG5@206350,2VM67@28216,COG2132@1,COG2132@2 NA|NA|NA Q Multicopper oxidase MAG.C3.5_01461 666681.M301_1604 1.6e-146 526.2 Nitrosomonadales copB ko:K15725 ko00000,ko02000 1.B.17.2.2 Bacteria 1MWB0@1224,2KM59@206350,2VIIW@28216,COG1538@1,COG1538@2 NA|NA|NA MU Outer membrane efflux protein MAG.C3.5_01463 582744.Msip34_1110 2.8e-88 331.6 Nitrosomonadales aat GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008914,GO:0016740,GO:0016746,GO:0016755,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.3.2.6 ko:K00684 R03813,R11443,R11444 RC00055,RC00064 ko00000,ko01000 Bacteria 1R9W8@1224,2KKS8@206350,2VIUV@28216,COG2360@1,COG2360@2 NA|NA|NA O Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine MAG.C3.5_01464 265072.Mfla_0931 2.2e-91 342.0 Nitrosomonadales ate GO:0003674,GO:0003824,GO:0004057,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016598,GO:0016740,GO:0016746,GO:0016755,GO:0019538,GO:0019941,GO:0030163,GO:0036211,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 2.3.2.29 ko:K21420 R11547,R11548 RC00064 ko00000,ko01000 Bacteria 1MW62@1224,2KKF8@206350,2VJ8E@28216,COG2935@1,COG2935@2 NA|NA|NA O May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate MAG.C3.5_01465 1165096.ARWF01000001_gene638 1.5e-97 362.8 Nitrosomonadales aroA GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008977,GO:0009058,GO:0009072,GO:0009073,GO:0009095,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019438,GO:0019752,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046983,GO:0047794,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0070403,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.3.1.12,1.3.1.43,2.5.1.19 ko:K00210,ko:K00220,ko:K00800,ko:K04517 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 M00022,M00025,M00040 R00732,R01728,R03460 RC00125,RC00350 ko00000,ko00001,ko00002,ko01000 Bacteria 1QTZA@1224,2KKEM@206350,2VIS1@28216,COG0287@1,COG0287@2 NA|NA|NA E PFAM Prephenate dehydrogenase MAG.C3.5_01466 640081.Dsui_1942 5.7e-235 820.5 Rhodocyclales cmk GO:0003674,GO:0003824,GO:0003866,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009314,GO:0009423,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0015939,GO:0015940,GO:0015949,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016765,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 1.17.7.4,2.5.1.19,2.7.1.26,2.7.4.25,2.7.7.2,6.3.2.1 ko:K00800,ko:K00945,ko:K02945,ko:K03527,ko:K03977,ko:K11753,ko:K13799 ko00240,ko00400,ko00410,ko00740,ko00770,ko00900,ko01100,ko01110,ko01130,ko01230,ko03010,map00240,map00400,map00410,map00740,map00770,map00900,map01100,map01110,map01130,map01230,map03010 M00022,M00052,M00096,M00119,M00125,M00178 R00158,R00161,R00512,R00549,R01665,R02473,R03460,R05884,R08210 RC00002,RC00017,RC00096,RC00141,RC00350,RC01137,RC01487 br01610,ko00000,ko00001,ko00002,ko01000,ko03009,ko03011 iEC042_1314.EC042_0998,iECNA114_1301.ECNA114_0940,iECSF_1327.ECSF_0829,iPC815.YPO1390,iPC815.YPO1391,iSDY_1059.SDY_2348 Bacteria 1MWMK@1224,2KUWK@206389,2VGZF@28216,COG0128@1,COG0128@2,COG0283@1,COG0283@2 NA|NA|NA F Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate MAG.C3.5_01467 265072.Mfla_0927 3.6e-294 1016.9 Nitrosomonadales rpsA GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0016043,GO:0017148,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113,GO:2000765,GO:2000766 1.17.7.4 ko:K02945,ko:K03527 ko00900,ko01100,ko01110,ko01130,ko03010,map00900,map01100,map01110,map01130,map03010 M00096,M00178 R05884,R08210 RC01137,RC01487 br01610,ko00000,ko00001,ko00002,ko01000,ko03011 Bacteria 1MVAV@1224,2KP6N@206350,2VI12@28216,COG0539@1,COG0539@2 NA|NA|NA J thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence MAG.C3.5_01468 582744.Msip34_1103 6.9e-41 172.9 Nitrosomonadales himD GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2001141 ko:K05788 ko00000,ko03032,ko03036,ko03400 Bacteria 1MZ7M@1224,2KN0D@206350,2VSPN@28216,COG0776@1,COG0776@2 NA|NA|NA K This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control MAG.C3.5_01469 582744.Msip34_1102 2.1e-20 104.8 Nitrosomonadales lapA ko:K08992 ko00000 Bacteria 1PJS6@1224,2KNZW@206350,2W85D@28216,COG5416@1,COG5416@2 NA|NA|NA S Lipopolysaccharide assembly protein A domain MAG.C3.5_01470 582744.Msip34_1101 2e-171 608.6 Nitrosomonadales lapB GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008653,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046872,GO:0071704,GO:0071944,GO:1901135,GO:1903509 ko:K19804 ko00000 Bacteria 1MVDP@1224,2KKVZ@206350,2VH49@28216,COG2956@1,COG2956@2 NA|NA|NA G Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane MAG.C3.5_01471 582744.Msip34_1100 4.8e-91 340.9 Nitrosomonadales pyrF GO:0003674,GO:0003824,GO:0004590,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 ko:K01591 ko00240,ko01100,map00240,map01100 M00051 R00965 RC00409 ko00000,ko00001,ko00002,ko01000 iECO103_1326.ECO103_1444,iECSF_1327.ECSF_1264,iSFV_1184.SFV_1294,iSF_1195.SF1285,iSFxv_1172.SFxv_1457,iS_1188.S1368,ic_1306.c1750 Bacteria 1MW2C@1224,2KM96@206350,2VJRD@28216,COG0284@1,COG0284@2 NA|NA|NA F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) MAG.C3.5_01472 582744.Msip34_1099 3e-21 107.8 Nitrosomonadales ybaV GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.1.26.11 ko:K00784,ko:K02237 ko03013,map03013 M00429 ko00000,ko00001,ko00002,ko01000,ko02044,ko03016 3.A.11.1,3.A.11.2 Bacteria 1N6Q3@1224,2KN8G@206350,2VVT0@28216,COG1555@1,COG1555@2 NA|NA|NA L TIGRFAM competence protein ComEA helix-hairpin-helix repeat MAG.C3.5_01473 153948.NAL212_2839 4.6e-116 427.2 Proteobacteria Bacteria 1MU7T@1224,COG2931@1,COG2931@2 NA|NA|NA Q COG2931, RTX toxins and related Ca2 -binding proteins MAG.C3.5_01474 153948.NAL212_2836 3.8e-145 521.2 Proteobacteria Bacteria 1QW33@1224,COG0457@1,COG0457@2 NA|NA|NA S TIGRFAM TIGR03032 family protein MAG.C3.5_01475 583345.Mmol_0406 2e-188 665.2 Nitrosomonadales yhjE Bacteria 1MU46@1224,2KKC4@206350,2VJXD@28216,COG0477@1,COG0477@2 NA|NA|NA EGP Sugar (and other) transporter MAG.C3.5_01476 1236959.BAMT01000007_gene2597 5.1e-103 380.6 Nitrosomonadales dnaN 2.7.7.7 ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1MVD9@1224,2KM2Q@206350,2VH9B@28216,COG0592@1,COG0592@2 NA|NA|NA L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria MAG.C3.5_01477 546264.NEIFLAOT_02566 9.9e-12 75.9 Proteobacteria Bacteria 1P3MU@1224,2DXS1@1,32V40@2 NA|NA|NA MAG.C3.5_01478 582744.Msip34_0388 5.7e-293 1013.1 Nitrosomonadales polA GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0030312,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0071944,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko01000,ko03032,ko03400 Bacteria 1MU31@1224,2KM0Q@206350,2VJ57@28216,COG0258@1,COG0258@2,COG0749@1,COG0749@2 NA|NA|NA L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity MAG.C3.5_01479 582744.Msip34_0386 3.4e-103 381.3 Nitrosomonadales cinA 3.5.1.42 ko:K03742 ko00760,map00760 R02322 RC00100 ko00000,ko00001,ko01000 Bacteria 1MVG6@1224,2KM94@206350,2VHTD@28216,COG1058@1,COG1058@2 NA|NA|NA S molybdopterin binding domain MAG.C3.5_01480 1235457.C404_11900 6.7e-65 254.2 Burkholderiaceae ko:K07090 ko00000 Bacteria 1K3RD@119060,1MVBS@1224,2VQ23@28216,COG0730@1,COG0730@2 NA|NA|NA S membrane transporter protein MAG.C3.5_01481 1101195.Meth11DRAFT_1769 1.8e-30 139.0 Nitrosomonadales blh 1.8.5.4 ko:K17218 ko00920,map00920 R10152 RC03155 ko00000,ko00001,ko01000 Bacteria 1N9AF@1224,2KN8F@206350,2VU0V@28216,COG3453@1,COG3453@2 NA|NA|NA S Putative phosphatase (DUF442) MAG.C3.5_01482 582744.Msip34_1583 1.9e-29 135.2 Nitrosomonadales bigR Bacteria 1N72Q@1224,2KN5Z@206350,2VU9V@28216,COG0640@1,COG0640@2 NA|NA|NA K helix_turn_helix, Arsenical Resistance Operon Repressor MAG.C3.5_01483 583345.Mmol_0808 1.5e-89 335.9 Nitrosomonadales blh Bacteria 1MURA@1224,2KM3H@206350,2VJYK@28216,COG0491@1,COG0491@2 NA|NA|NA S Metallo-beta-lactamase superfamily MAG.C3.5_01484 265072.Mfla_1737 4.2e-281 973.4 Nitrosomonadales prfC GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019538,GO:0022411,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032984,GO:0034641,GO:0034645,GO:0036094,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02837 ko00000,ko03012 Bacteria 1MU7X@1224,2KKIK@206350,2VIV3@28216,COG4108@1,COG4108@2 NA|NA|NA J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP MAG.C3.5_01485 1502770.JQMG01000001_gene2279 1.4e-34 152.9 Betaproteobacteria Bacteria 1NK9M@1224,2EI0V@1,2VY7B@28216,33BSC@2 NA|NA|NA MAG.C3.5_01486 1132855.KB913035_gene1176 1.8e-34 152.1 Nitrosomonadales ychJ ko:K09858 ko00000 Bacteria 1MZZK@1224,2KN6D@206350,2VTZE@28216,COG3012@1,COG3012@2 NA|NA|NA S Belongs to the UPF0225 family MAG.C3.5_01487 582744.Msip34_1254 2.4e-121 442.6 Nitrosomonadales 2.7.13.3 ko:K02484,ko:K07640 ko01503,ko02020,map01503,map02020 M00447,M00727,M00728 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1N17V@1224,2KMEA@206350,2WEJE@28216,COG0642@1,COG2205@2,COG2770@1,COG2770@2 NA|NA|NA T PhoQ Sensor MAG.C3.5_01488 582744.Msip34_1253 1.3e-88 332.8 Nitrosomonadales Bacteria 1MVCB@1224,2KMK4@206350,2VJB0@28216,COG0745@1,COG0745@2 NA|NA|NA T PFAM response regulator receiver MAG.C3.5_01490 1502770.JQMG01000001_gene1806 1.8e-24 119.4 Nitrosomonadales Bacteria 1N6PJ@1224,2KNAC@206350,2VW8V@28216,COG3678@1,COG3678@2 NA|NA|NA NPTU LTXXQ motif family protein MAG.C3.5_01491 265072.Mfla_1742 6.7e-64 250.4 Nitrosomonadales Bacteria 1PJFT@1224,2A8HR@1,2KMSG@206350,2W7Z0@28216,30XJW@2 NA|NA|NA MAG.C3.5_01492 582744.Msip34_1249 2.8e-279 967.6 Nitrosomonadales yheS GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K06158 ko00000,ko03012 Bacteria 1MU37@1224,2KKQI@206350,2VHGH@28216,COG0488@1,COG0488@2 NA|NA|NA S PFAM ABC transporter MAG.C3.5_01493 582744.Msip34_1248 0.0 1682.5 Nitrosomonadales yhdP GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0042597,GO:0044425,GO:0044459,GO:0044464,GO:0071944 Bacteria 1MXWF@1224,2KKF5@206350,2VH52@28216,COG3164@1,COG3164@2 NA|NA|NA S Protein of unknown function MAG.C3.5_01494 582744.Msip34_1247 3.5e-136 491.1 Nitrosomonadales ramA 3.5.1.77,3.5.5.1 ko:K01459,ko:K01501,ko:K11206 ko00380,ko00460,ko00627,ko00643,ko00910,ko01120,map00380,map00460,map00627,map00643,map00910,map01120 R00540,R01887,R03093,R03542,R05591,R07855 RC00315,RC00325,RC00617,RC00959,RC02811 ko00000,ko00001,ko01000 Bacteria 1MUUB@1224,2KKUS@206350,2VIR4@28216,COG0388@1,COG0388@2 NA|NA|NA S PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase MAG.C3.5_01495 582744.Msip34_1246 1.3e-252 878.6 Nitrosomonadales tldD ko:K03568 ko00000,ko01002 Bacteria 1MUSK@1224,2KKXM@206350,2VHJ9@28216,COG0312@1,COG0312@2 NA|NA|NA S PFAM peptidase U62 modulator of DNA gyrase MAG.C3.5_01496 1236959.BAMT01000012_gene3036 3.3e-12 77.8 Nitrosomonadales Bacteria 1NGVT@1224,2ENVQ@1,2KND3@206350,2VY6X@28216,33GGS@2 NA|NA|NA S Protein of unknown function (DUF2934) MAG.C3.5_01497 265072.Mfla_1748 0.0 1926.8 Nitrosomonadales mfd GO:0000715,GO:0000716,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008094,GO:0008150,GO:0008152,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0015616,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019899,GO:0031323,GO:0031326,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0043175,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051276,GO:0051716,GO:0060255,GO:0065007,GO:0070063,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1903506,GO:2000112,GO:2001141 ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Bacteria 1MUXG@1224,2KKSG@206350,2VI7M@28216,COG1197@1,COG1197@2 NA|NA|NA L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site MAG.C3.5_01498 1538295.JY96_02000 5.5e-30 137.1 Betaproteobacteria ko:K08738 ko00920,ko01100,ko01120,ko01524,ko02020,ko04115,ko04210,ko04214,ko04215,ko04932,ko05010,ko05012,ko05014,ko05016,ko05134,ko05145,ko05152,ko05161,ko05164,ko05167,ko05168,ko05200,ko05210,ko05222,ko05416,map00920,map01100,map01120,map01524,map02020,map04115,map04210,map04214,map04215,map04932,map05010,map05012,map05014,map05016,map05134,map05145,map05152,map05161,map05164,map05167,map05168,map05200,map05210,map05222,map05416 M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002 3.D.4.6 Bacteria 1MZGS@1224,2VVQN@28216,COG3474@1,COG3474@2 NA|NA|NA C Cytochrome c MAG.C3.5_01499 666681.M301_0043 1.5e-178 632.5 Betaproteobacteria 1.16.9.1 ko:K20150 ko00000,ko01000 Bacteria 1QCH9@1224,28JQB@1,2VJJF@28216,2Z9G8@2 NA|NA|NA MAG.C3.5_01500 1219375.CM002139_gene1704 2e-28 132.5 Xanthomonadales ko:K12262 ko00000 Bacteria 1MZ7X@1224,1S5MD@1236,1X7R8@135614,COG3038@1,COG3038@2 NA|NA|NA C Prokaryotic cytochrome b561 MAG.C3.5_01501 1120792.JAFV01000001_gene18 1.6e-18 101.3 Proteobacteria Bacteria 1MU7T@1224,COG2931@1,COG2931@2 NA|NA|NA Q COG2931, RTX toxins and related Ca2 -binding proteins MAG.C3.5_01502 768671.ThimaDRAFT_2506 7.4e-24 115.9 Chromatiales phnA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K06193 ko01120,map01120 ko00000 Bacteria 1RGUU@1224,1S60W@1236,1WYXC@135613,COG2824@1,COG2824@2 NA|NA|NA P PFAM PhnA protein MAG.C3.5_01503 666681.M301_0237 2.3e-102 379.0 Nitrosomonadales thiO GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016491,GO:0016638,GO:0016641,GO:0017144,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0036094,GO:0042364,GO:0042723,GO:0042724,GO:0043167,GO:0043168,GO:0043436,GO:0043799,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0071949,GO:0072527,GO:0072528,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.4.3.19 ko:K03153 ko00730,ko01100,map00730,map01100 R07463 RC01788 ko00000,ko00001,ko01000 Bacteria 1MVIZ@1224,2KKNY@206350,2W7QP@28216,COG0665@1,COG0665@2 NA|NA|NA E PFAM FAD dependent oxidoreductase MAG.C3.5_01504 582744.Msip34_0208 4.8e-266 923.7 Nitrosomonadales kefB ko:K03455 ko00000 2.A.37 Bacteria 1MV34@1224,2KMER@206350,2VHQQ@28216,COG0475@1,COG0475@2,COG1226@1,COG1226@2 NA|NA|NA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family MAG.C3.5_01505 265072.Mfla_0137 4e-128 464.5 Nitrosomonadales kdsD GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0005996,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0019146,GO:0019294,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0046364,GO:0046394,GO:0046400,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.3.1.13 ko:K06041 ko00540,ko01100,map00540,map01100 M00063 R01530 RC00541 ko00000,ko00001,ko00002,ko01000,ko01005 iECH74115_1262.ECH74115_4519,iECSP_1301.ECSP_4172,iECs_1301.ECs4076,iPC815.YPO3577,iSFV_1184.SFV_3227,iSFxv_1172.SFxv_3550,iYL1228.KPN_03607,iZ_1308.Z4560 Bacteria 1MUXD@1224,2KMBN@206350,2VI24@28216,COG0517@1,COG0517@2,COG0794@1,COG0794@2 NA|NA|NA M Belongs to the SIS family. GutQ KpsF subfamily MAG.C3.5_01506 265072.Mfla_0138 1.8e-66 258.8 Nitrosomonadales kdsC 3.1.3.45 ko:K03270,ko:K11719 ko00540,ko01100,map00540,map01100 M00063 R03350 RC00017 ko00000,ko00001,ko00002,ko01000,ko01005,ko02000 1.B.42.1 Bacteria 1RH85@1224,2KMW1@206350,2VRQX@28216,COG1778@1,COG1778@2 NA|NA|NA S TIGRFAM 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family MAG.C3.5_01507 666681.M301_0233 3e-60 238.4 Nitrosomonadales lptC GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015920,GO:0016020,GO:0016021,GO:0017089,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0033036,GO:0042597,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0071702,GO:0071944,GO:1901264 ko:K02040,ko:K11719 ko02010,ko02020,ko05152,map02010,map02020,map05152 M00222 ko00000,ko00001,ko00002,ko02000 1.B.42.1,3.A.1.7 iB21_1397.B21_03015,iECBD_1354.ECBD_0543,iECB_1328.ECB_03064,iECD_1391.ECD_03064 Bacteria 1R5UK@1224,2KMR4@206350,2VU37@28216,COG3117@1,COG3117@2 NA|NA|NA S Lipopolysaccharide-assembly, LptC-related MAG.C3.5_01508 1236959.BAMT01000006_gene330 2.8e-67 261.5 Nitrosomonadales lptA GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0009279,GO:0010876,GO:0015920,GO:0016020,GO:0017089,GO:0019867,GO:0030288,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0042597,GO:0042802,GO:0044462,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0071702,GO:0071944,GO:1901264 ko:K09774 ko00000,ko02000 1.B.42.1 iB21_1397.B21_03016,iECBD_1354.ECBD_0542,iECB_1328.ECB_03065,iECD_1391.ECD_03065 Bacteria 1N776@1224,2KMKV@206350,2VSI4@28216,COG1934@1,COG1934@2 NA|NA|NA S Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane MAG.C3.5_01509 582744.Msip34_0203 1.2e-110 406.0 Nitrosomonadales lptB ko:K01990,ko:K06861 ko02010,map02010 M00254,M00320 ko00000,ko00001,ko00002,ko01000,ko02000 1.B.42.1,3.A.1 Bacteria 1MU8M@1224,2KM1F@206350,2VH29@28216,COG1137@1,COG1137@2 NA|NA|NA S PFAM ABC transporter MAG.C3.5_01510 265072.Mfla_0142 7.5e-208 729.9 Nitrosomonadales rpoN GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0042802,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 ko:K03092 ko02020,ko05111,map02020,map05111 ko00000,ko00001,ko03021 Bacteria 1MW4V@1224,2KKHP@206350,2VIEV@28216,COG1508@1,COG1508@2 NA|NA|NA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released MAG.C3.5_01511 666681.M301_0229 5.8e-44 183.3 Nitrosomonadales raiA ko:K05808 ko00000,ko03009 Bacteria 1MZHW@1224,2KMX3@206350,2VU5H@28216,COG1544@1,COG1544@2 NA|NA|NA J PFAM sigma 54 modulation protein ribosomal protein S30EA MAG.C3.5_01512 582744.Msip34_0200 3.2e-138 498.0 Nitrosomonadales hprK GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K06023 ko00000,ko01000 Bacteria 1NNN5@1224,2KKT6@206350,2VJCH@28216,COG1493@1,COG1493@2 NA|NA|NA T Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) MAG.C3.5_01513 582744.Msip34_0199 9.9e-112 409.8 Nitrosomonadales rapZ GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0034641,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363 ko:K06958 ko00000,ko03019 Bacteria 1MVX6@1224,2KKJ2@206350,2VIH5@28216,COG1660@1,COG1660@2 NA|NA|NA S Displays ATPase and GTPase activities MAG.C3.5_01514 582744.Msip34_0198 7.6e-57 226.5 Nitrosomonadales manX 2.7.1.191,2.7.1.194 ko:K02793,ko:K02794,ko:K02821 ko00051,ko00053,ko00520,ko01100,ko01120,ko02060,map00051,map00053,map00520,map01100,map01120,map02060 M00276,M00283,M00550 R02630,R07671 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.6.1,4.A.7.1 Bacteria 1RHH7@1224,2KMX4@206350,2VT9I@28216,COG2893@1,COG2893@2 NA|NA|NA G PFAM PTS system fructose subfamily IIA component MAG.C3.5_01515 265072.Mfla_0147 3.2e-32 144.1 Nitrosomonadales ptsH GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 ko:K02784,ko:K08485,ko:K11189 ko02060,map02060 ko00000,ko00001,ko02000 4.A.2.1,8.A.8.1.1 Bacteria 1N6RM@1224,2KN6U@206350,2VU8W@28216,COG1925@1,COG1925@2 NA|NA|NA G PFAM phosphoryl transfer system HPr MAG.C3.5_01516 582744.Msip34_0196 4.5e-260 903.7 Nitrosomonadales ptsI 2.7.1.202,2.7.3.9 ko:K02768,ko:K08483,ko:K11183 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 M00273 R03232 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.2.1,8.A.7 Bacteria 1MUT8@1224,2KKUE@206350,2VH9N@28216,COG1080@1,COG1080@2 NA|NA|NA G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) MAG.C3.5_01517 582744.Msip34_0195 8.1e-33 146.4 Nitrosomonadales ko:K09940 ko00000 Bacteria 1N8TC@1224,2KP9A@206350,2WFWV@28216,COG3296@1,COG3296@2 NA|NA|NA S Domain of unknown function (DUF4870) MAG.C3.5_01519 1097668.BYI23_A015210 1.1e-23 116.7 Burkholderiaceae Bacteria 1K6ER@119060,1R554@1224,2VKBV@28216,COG1216@1,COG1216@2 NA|NA|NA S Glycosyl transferase, family 2 MAG.C3.5_01520 582744.Msip34_1790 1.2e-65 256.5 Nitrosomonadales ko:K09929 ko00000 Bacteria 1R8C9@1224,2KMRC@206350,2VPVN@28216,COG3219@1,COG3219@2 NA|NA|NA S Putative DNA-binding domain MAG.C3.5_01521 582744.Msip34_1791 3.1e-124 451.4 Nitrosomonadales ko:K09930 ko00000 Bacteria 1MURE@1224,2KMHR@206350,2VKP0@28216,COG3220@1,COG3220@2 NA|NA|NA S Protein of unknown function (DUF692) MAG.C3.5_01522 582744.Msip34_1792 1.3e-17 95.9 Nitrosomonadales 3.2.1.4 ko:K01179 ko00500,ko01100,map00500,map01100 R06200,R11307,R11308 ko00000,ko00001,ko01000 GH5,GH9 Bacteria 1PW8F@1224,2KN9B@206350,2WBTI@28216,COG3767@1,COG3767@2 NA|NA|NA MAG.C3.5_01523 582744.Msip34_1793 1.3e-19 102.1 Nitrosomonadales Bacteria 1NH4R@1224,2KNB0@206350,2W81G@28216,COG5660@1,COG5660@2 NA|NA|NA S Putative zinc-finger MAG.C3.5_01524 582744.Msip34_1794 1.8e-77 295.4 Nitrosomonadales sigX ko:K03088 ko00000,ko03021 Bacteria 1RHKM@1224,2KM2U@206350,2VRMP@28216,COG1595@1,COG1595@2 NA|NA|NA K RNA polymerase sigma factor, sigma-70 family MAG.C3.5_01525 582744.Msip34_1795 2.5e-58 231.5 Nitrosomonadales Bacteria 1RH66@1224,2AFCJ@1,2KMYR@206350,2VSTN@28216,315C6@2 NA|NA|NA S Domain of unknown function (DUF1841) MAG.C3.5_01526 1163617.SCD_n01987 7.8e-26 122.9 Betaproteobacteria GO:0008150,GO:0040007 Bacteria 1RBRR@1224,2VQ7K@28216,COG4398@1,COG4398@2 NA|NA|NA S FIST_C MAG.C3.5_01527 1502770.JQMG01000001_gene1928 3.4e-129 468.4 Betaproteobacteria Bacteria 1MU2C@1224,2VH3V@28216,COG5001@1,COG5001@2 NA|NA|NA T Diguanylate cyclase MAG.C3.5_01528 583345.Mmol_1256 1.6e-196 693.0 Betaproteobacteria mcpY ko:K03406 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko02035 Bacteria 1MU9B@1224,2VGZ8@28216,COG0840@1,COG0840@2 NA|NA|NA NT chemotaxis MAG.C3.5_01529 1116472.MGMO_36c00010 2.3e-207 728.0 Gammaproteobacteria Bacteria 1ND1J@1224,1RQ15@1236,COG4447@1,COG4447@2 NA|NA|NA S protein related to plant photosystem II stability assembly factor MAG.C3.5_01530 1116472.MGMO_36c00020 4.1e-32 143.7 Gammaproteobacteria ko:K03636 ko04122,map04122 ko00000,ko00001 Bacteria 1N6RG@1224,1S9AZ@1236,COG1977@1,COG1977@2 NA|NA|NA H Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin MAG.C3.5_01531 1117319.PSPO_01101 2e-12 78.2 Pseudoalteromonadaceae Bacteria 1N75V@1224,1TB5V@1236,2EH60@1,2Q3AH@267888,33AXW@2 NA|NA|NA S Protein of unknown function (DUF2798) MAG.C3.5_01532 1165096.ARWF01000001_gene917 2.5e-77 295.4 Nitrosomonadales fliR ko:K02421 ko02040,map02040 ko00000,ko00001,ko02035,ko02044 3.A.6.2 Bacteria 1NIF4@1224,2KM5Q@206350,2VQ64@28216,COG1684@1,COG1684@2 NA|NA|NA N Role in flagellar biosynthesis MAG.C3.5_01533 582744.Msip34_0767 3.4e-29 134.0 Nitrosomonadales fliQ ko:K02420 ko02040,map02040 ko00000,ko00001,ko02035,ko02044 3.A.6.2 Bacteria 1N73W@1224,2KN3B@206350,2VU8S@28216,COG1987@1,COG1987@2 NA|NA|NA N Role in flagellar biosynthesis MAG.C3.5_01534 666681.M301_1012 1.2e-95 356.3 Nitrosomonadales fliP GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02419,ko:K03226 ko02040,ko03070,map02040,map03070 M00332,M00542,M00660 ko00000,ko00001,ko00002,ko02035,ko02044 3.A.6.1,3.A.6.2,3.A.6.3 Bacteria 1MVBU@1224,2KKP6@206350,2VIU6@28216,COG1338@1,COG1338@2 NA|NA|NA N Plays a role in the flagellum-specific transport system MAG.C3.5_01535 582744.Msip34_0765 6.3e-20 104.0 Nitrosomonadales fliO ko:K02418 ko02040,map02040 ko00000,ko00001,ko02035,ko02044 3.A.6.2 Bacteria 1PQ30@1224,2KN9H@206350,2VWHP@28216,COG3190@1,COG3190@2 NA|NA|NA N PFAM Flagellar biosynthesis protein, FliO MAG.C3.5_01536 1236959.BAMT01000016_gene2767 2.1e-54 218.4 Nitrosomonadales fliN GO:0005575,GO:0005623,GO:0005886,GO:0009288,GO:0009425,GO:0016020,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0071944 ko:K02417 ko02030,ko02040,map02030,map02040 ko00000,ko00001,ko02035,ko02044 3.A.6.2,3.A.6.3 Bacteria 1RGWT@1224,2KMVJ@206350,2VSZ7@28216,COG1886@1,COG1886@2 NA|NA|NA N PFAM surface presentation of antigens (SPOA) MAG.C3.5_01537 1236959.BAMT01000016_gene2768 1.3e-161 575.9 Nitrosomonadales fliM GO:0005575,GO:0005623,GO:0005886,GO:0006935,GO:0008150,GO:0009288,GO:0009425,GO:0009605,GO:0016020,GO:0040011,GO:0042221,GO:0042330,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0050896,GO:0050918,GO:0071944 ko:K02416 ko02030,ko02040,map02030,map02040 ko00000,ko00001,ko02035 Bacteria 1MX01@1224,2KKQT@206350,2VI0A@28216,COG1868@1,COG1868@2 NA|NA|NA N TIGRFAM flagellar motor switch protein FliM MAG.C3.5_01538 582744.Msip34_0762 4.3e-28 131.3 Nitrosomonadales fliL GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009425,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588 ko:K02415 ko00000,ko02035 Bacteria 1RARK@1224,2KP74@206350,2VTXC@28216,COG1580@1,COG1580@2 NA|NA|NA N Flagellar basal body-associated protein FliL MAG.C3.5_01540 582744.Msip34_0539 2.5e-244 851.7 Nitrosomonadales oprC ko:K02014 ko00000,ko02000 1.B.14 Bacteria 1MW7D@1224,2KNKX@206350,2VIV2@28216,COG1629@1,COG4771@2 NA|NA|NA P TonB-dependent Receptor Plug Domain MAG.C3.5_01541 522306.CAP2UW1_3428 1.4e-195 689.5 unclassified Betaproteobacteria 2.7.7.7 ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1KQH8@119066,1MU2C@1224,2VH3V@28216,COG0834@1,COG0834@2,COG5000@1,COG5000@2,COG5001@1,COG5001@2 NA|NA|NA T SMART PAS domain containing protein MAG.C3.5_01542 582744.Msip34_0017 5e-228 797.3 Nitrosomonadales acoR ko:K21405 ko00000,ko03000 Bacteria 1NRG5@1224,2KKV7@206350,2VICI@28216,COG3284@1,COG3284@2 NA|NA|NA KQ GAF domain MAG.C3.5_01543 582744.Msip34_1843 1.4e-126 459.1 Nitrosomonadales suhB GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006020,GO:0006066,GO:0006793,GO:0006796,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008934,GO:0009056,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0019751,GO:0023052,GO:0031403,GO:0031420,GO:0042578,GO:0043167,GO:0043169,GO:0043647,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046164,GO:0046174,GO:0046434,GO:0046838,GO:0046855,GO:0046872,GO:0047954,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052745,GO:0052834,GO:0065007,GO:0071545,GO:0071704,GO:1901575,GO:1901615,GO:1901616 3.1.3.25 ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 M00131 R01185,R01186,R01187 RC00078 ko00000,ko00001,ko00002,ko01000 iECP_1309.ECP_2538,iPC815.YPO2899 Bacteria 1MUQT@1224,2KKRI@206350,2VIXG@28216,COG0483@1,COG0483@2 NA|NA|NA G PFAM Inositol monophosphatase MAG.C3.5_01544 582744.Msip34_1191 0.0 1172.9 Nitrosomonadales ftsK ko:K03466 ko00000,ko03036 3.A.12 Bacteria 1MVPI@1224,2KKKE@206350,2VHJV@28216,COG1674@1,COG1674@2 NA|NA|NA D Ftsk_gamma MAG.C3.5_01545 1236959.BAMT01000001_gene1325 2.9e-70 271.6 Nitrosomonadales lolA 6.3.5.1 ko:K01950,ko:K03634 ko00760,ko01100,map00760,map01100 M00115 R00257 RC00010,RC00100 ko00000,ko00001,ko00002,ko01000 Bacteria 1PXDV@1224,2KMKK@206350,2VNNH@28216,COG2834@1,COG2834@2 NA|NA|NA M Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) MAG.C3.5_01546 1175306.GWL_44540 6.5e-40 171.0 Oxalobacteraceae Bacteria 1R2K9@1224,2WICR@28216,4796C@75682,COG4254@1,COG4254@2 NA|NA|NA S FecR protein MAG.C3.5_01547 1144319.PMI16_02871 1e-23 119.8 Oxalobacteraceae hxuA GO:0005575,GO:0005576 Bacteria 1NH56@1224,2VZIQ@28216,478G3@75682,COG3210@1,COG3210@2 NA|NA|NA U haemagglutination activity domain MAG.C3.5_01548 1173028.ANKO01000058_gene3042 1.2e-18 101.3 Oscillatoriales 3.2.1.4 ko:K01179,ko:K21449 ko00500,ko01100,map00500,map01100 R06200,R11307,R11308 ko00000,ko00001,ko01000,ko02000 1.B.40.2 GH5,GH9 Bacteria 1G1I0@1117,1HAPI@1150,COG1404@1,COG1404@2,COG2931@1,COG2931@2,COG4447@1,COG4447@2 NA|NA|NA Q PFAM Hemolysin-type calcium-binding repeat (2 copies) MAG.C3.5_01549 1123368.AUIS01000016_gene2552 8.6e-109 400.6 Acidithiobacillales pilC ko:K02455,ko:K02653 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02035,ko02044 3.A.15,3.A.15.2 Bacteria 1MV4U@1224,1RNV0@1236,2NCMQ@225057,COG1459@1,COG1459@2 NA|NA|NA NU PFAM type II secretion system MAG.C3.5_01550 1123368.AUIS01000016_gene2551 1e-195 689.9 Acidithiobacillales pulE-1 ko:K02454,ko:K02652 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02035,ko02044 3.A.15,3.A.15.2 Bacteria 1MU7V@1224,1RMBS@1236,2NCBG@225057,COG2804@1,COG2804@2 NA|NA|NA NU Type II secretion system (T2SS), protein E, N-terminal domain MAG.C3.5_01552 243231.GSU2576 8.4e-42 177.6 Deltaproteobacteria Bacteria 1RAH3@1224,2WPR9@28221,42PRF@68525,COG1639@1,COG1639@2 NA|NA|NA T PFAM Metal-dependent hydrolase HDOD MAG.C3.5_01554 583345.Mmol_0712 1.7e-93 349.0 Nitrosomonadales ompW ko:K07275 ko00000 Bacteria 1NUZJ@1224,2KKCV@206350,2VR6Y@28216,COG3047@1,COG3047@2 NA|NA|NA M PFAM OmpW family MAG.C3.5_01555 395965.Msil_1172 7.9e-32 144.4 Beijerinckiaceae Bacteria 1NDBI@1224,2U0C9@28211,3NAPD@45404,COG3174@1,COG3174@2 NA|NA|NA S Domain of unknown function (DUF4010) MAG.C3.5_01556 666681.M301_0026 0.0 1323.1 Nitrosomonadales Bacteria 1MU2C@1224,2KMH3@206350,2VH3V@28216,COG2203@1,COG2203@2,COG5001@1,COG5001@2 NA|NA|NA T GAF domain MAG.C3.5_01557 1101195.Meth11DRAFT_1249 8.5e-63 246.9 Nitrosomonadales braZ ko:K09792 ko00000 Bacteria 1PN2Q@1224,2KMZ8@206350,2VNU4@28216,COG2836@1,COG2836@2 NA|NA|NA S Cytochrome C biogenesis protein transmembrane region MAG.C3.5_01558 1132855.KB913035_gene2099 8.6e-217 759.6 Nitrosomonadales hemN GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.98.3 ko:K02495 ko00860,ko01100,ko01110,map00860,map01100,map01110 M00121 R06895 RC00884 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV1I@1224,2KM6V@206350,2VJ1F@28216,COG0635@1,COG0635@2 NA|NA|NA H Belongs to the anaerobic coproporphyrinogen-III oxidase family MAG.C3.5_01559 666681.M301_1921 3.3e-109 401.4 Nitrosomonadales anr ko:K01420 ko00000,ko03000 Bacteria 1MVGE@1224,2KM5E@206350,2VH04@28216,COG0664@1,COG0664@2 NA|NA|NA K helix_turn_helix, cAMP Regulatory protein MAG.C3.5_01561 582744.Msip34_1737 2e-275 954.5 Nitrosomonadales typA GO:0000027,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006996,GO:0008150,GO:0009266,GO:0009408,GO:0009409,GO:0009628,GO:0009987,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071826,GO:0071840 ko:K06207 ko00000 Bacteria 1MV5Q@1224,2KKVX@206350,2VH2W@28216,COG1217@1,COG1217@2 NA|NA|NA T Elongation factor Tu domain 2 MAG.C3.5_01562 1132855.KB913035_gene261 9.9e-124 449.5 Nitrosomonadales 3.1.1.45 ko:K01061 ko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,map00361,map00364,map00623,map01100,map01110,map01120,map01130 R03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222 RC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686 ko00000,ko00001,ko01000 Bacteria 1MW88@1224,2KKN6@206350,2VJGH@28216,COG0412@1,COG0412@2 NA|NA|NA Q PFAM Dienelactone hydrolase MAG.C3.5_01563 1502770.JQMG01000001_gene1303 1.4e-136 492.7 Nitrosomonadales qor 1.1.1.1,1.6.5.5 ko:K00001,ko:K00344 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 R00623,R00754,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310 RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273 ko00000,ko00001,ko01000 Bacteria 1MU4N@1224,2KKR9@206350,2VIU4@28216,COG0604@1,COG0604@2 NA|NA|NA C Zinc-binding dehydrogenase MAG.C3.5_01564 1132855.KB913035_gene159 1.1e-161 576.2 Nitrosomonadales yqhD ko:K00100,ko:K08325,ko:K19955 ko00640,ko00650,ko01120,map00640,map00650,map01120 R02528,R03544,R03545 RC00087,RC00739 ko00000,ko00001,ko01000 Bacteria 1QUBJ@1224,2KNU8@206350,2VHQE@28216,COG1979@1,COG1979@2 NA|NA|NA C Iron-containing alcohol dehydrogenase MAG.C3.5_01565 1132855.KB913035_gene158 3.6e-71 274.6 Betaproteobacteria ko:K16137 ko00000,ko03000 Bacteria 1RA4T@1224,2VQJU@28216,COG1309@1,COG1309@2 NA|NA|NA K Transcriptional regulator MAG.C3.5_01566 1000565.METUNv1_03477 1.2e-37 162.5 Rhodocyclales Bacteria 1MZ7P@1224,2DM6D@1,2KYYM@206389,2VUHB@28216,31WQ8@2 NA|NA|NA MAG.C3.5_01567 1236959.BAMT01000001_gene1689 6e-152 544.3 Nitrosomonadales amiC GO:0000003,GO:0000910,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0008745,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0019954,GO:0022402,GO:0022414,GO:0030288,GO:0030313,GO:0031975,GO:0032505,GO:0042597,GO:0043093,GO:0044464,GO:0051301,GO:0061783 3.5.1.28 ko:K01448 ko01503,map01503 M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 iPC815.YPO1023,iSDY_1059.SDY_3034,iYL1228.KPN_03225 Bacteria 1MUQK@1224,2KKBH@206350,2VHXN@28216,COG0860@1,COG0860@2 NA|NA|NA M Ami_3 MAG.C3.5_01568 582744.Msip34_1284 2e-58 231.9 Nitrosomonadales yjeE GO:0000166,GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0040007,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043531,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.1.221,5.1.1.1 ko:K01775,ko:K06925,ko:K07102,ko:K07452 ko00473,ko00520,ko01100,ko01502,map00473,map00520,map01100,map01502 R00401,R08968,R11024 RC00002,RC00078,RC00285 ko00000,ko00001,ko01000,ko01011,ko02048,ko03016 Bacteria 1RGYU@1224,2KMRX@206350,2VSJY@28216,COG0802@1,COG0802@2 NA|NA|NA S Threonylcarbamoyl adenosine biosynthesis protein TsaE MAG.C3.5_01569 1236959.BAMT01000001_gene1687 2.2e-164 585.1 Nitrosomonadales queG GO:0003674,GO:0003824,GO:0006091,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009055,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0022900,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 ko:K18979 ko00000,ko01000,ko03016 Bacteria 1MV1H@1224,2KM7D@206350,2VI7V@28216,COG1600@1,COG1600@2 NA|NA|NA C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) MAG.C3.5_01570 265072.Mfla_1378 1.3e-168 599.7 Nitrosomonadales Bacteria 1NSSV@1224,2KPA3@206350,2WH9S@28216,COG1807@1,COG1807@2 NA|NA|NA M Dolichyl-phosphate-mannose-protein mannosyltransferase MAG.C3.5_01571 582744.Msip34_1281 6.9e-141 506.9 Nitrosomonadales yfdH 2.4.1.83 ko:K00721,ko:K20534 ko00510,ko01100,map00510,map01100 R01009 RC00005 ko00000,ko00001,ko01000,ko01003,ko01005,ko02000 4.D.2.1.9 GT2 Bacteria 1QTWU@1224,2KKY5@206350,2WGWG@28216,COG1215@1,COG1215@2 NA|NA|NA M PFAM Glycosyl transferase family 2 MAG.C3.5_01572 1101195.Meth11DRAFT_1647 6.9e-39 166.8 Nitrosomonadales Bacteria 1N6WN@1224,2KN76@206350,2VW0C@28216,COG2246@1,COG2246@2 NA|NA|NA S GtrA-like protein MAG.C3.5_01573 1101195.Meth11DRAFT_1646 5.6e-72 277.7 Nitrosomonadales 3.5.1.105 ko:K03478 ko00000,ko01000 Bacteria 1MX3P@1224,2KMMB@206350,2VSK0@28216,COG3394@1,COG3394@2 NA|NA|NA G YdjC-like protein MAG.C3.5_01574 582744.Msip34_1279 1.6e-47 195.7 Nitrosomonadales Bacteria 1PJHE@1224,2BZ0G@1,2KN1S@206350,2W7ZX@28216,30XN9@2 NA|NA|NA MAG.C3.5_01575 1165096.ARWF01000001_gene694 5.4e-151 541.2 Nitrosomonadales ndvC 3.2.1.58 ko:K01210,ko:K03292 ko00500,map00500 R00308,R03115 RC00467 ko00000,ko00001,ko01000 2.A.2 Bacteria 1MWJJ@1224,2KKP0@206350,2VIIU@28216,COG5309@1,COG5309@2 NA|NA|NA G beta (1-6) glucans synthase MAG.C3.5_01576 1101195.Meth11DRAFT_1643 0.0 1376.3 Nitrosomonadales ndvB 2.4.1.12,3.2.1.58 ko:K00694,ko:K01210,ko:K03292 ko00500,ko01100,ko02026,map00500,map01100,map02026 R00308,R02889,R03115 RC00005,RC00467 ko00000,ko00001,ko01000,ko01003,ko02000 2.A.2,4.D.3.1.2,4.D.3.1.5,4.D.3.1.6 GT2 Bacteria 1MWF8@1224,2KM1U@206350,2VHGG@28216,COG1215@1,COG1215@2,COG5309@1,COG5309@2 NA|NA|NA M Glycosyl transferase family 21 MAG.C3.5_01577 582744.Msip34_1275 5.2e-230 803.9 Nitrosomonadales yjcC 3.1.4.52 ko:K20963 ko05111,map05111 ko00000,ko00001,ko01000 Bacteria 1MVJY@1224,2KKRP@206350,2VI53@28216,COG0517@1,COG0517@2,COG2199@1,COG2199@2,COG2200@1,COG2200@2 NA|NA|NA T PFAM EAL domain MAG.C3.5_01579 1502770.JQMG01000001_gene2228 1.9e-78 298.9 Nitrosomonadales gph GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006040,GO:0006082,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008967,GO:0009254,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019752,GO:0030203,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044260,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097172,GO:1901135,GO:1901360,GO:1901564 3.1.3.105 ko:K22292 ko00520,map00520 R11785 RC00017 ko00000,ko00001,ko01000 Bacteria 1RCXJ@1224,2KMBK@206350,2VS13@28216,COG0546@1,COG0546@2 NA|NA|NA S subfamily IA, variant 1 MAG.C3.5_01580 1236959.BAMT01000013_gene3002 4.8e-99 367.5 Nitrosomonadales ubiG 2.1.1.222,2.1.1.64 ko:K00568 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00117 R04988,R05614,R08769,R08781 RC00003,RC00392,RC01895 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU89@1224,2KKJS@206350,2VHGP@28216,COG2227@1,COG2227@2 NA|NA|NA H O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway MAG.C3.5_01581 265072.Mfla_1577 1.7e-166 592.4 Nitrosomonadales mtaD 3.5.4.28,3.5.4.31 ko:K12960 ko00270,ko01100,map00270,map01100 R09660 RC00477 ko00000,ko00001,ko01000 Bacteria 1MVPA@1224,2KKCD@206350,2VJ4R@28216,COG0402@1,COG0402@2 NA|NA|NA F Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine MAG.C3.5_01582 582744.Msip34_1681 3.8e-119 434.9 Nitrosomonadales ompA GO:0000746,GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006950,GO:0006974,GO:0008150,GO:0009279,GO:0009597,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0015267,GO:0015288,GO:0016020,GO:0016021,GO:0016032,GO:0019058,GO:0019867,GO:0022803,GO:0022829,GO:0022857,GO:0030260,GO:0030312,GO:0030313,GO:0031224,GO:0031975,GO:0032991,GO:0033554,GO:0034220,GO:0042802,GO:0043207,GO:0044403,GO:0044409,GO:0044419,GO:0044425,GO:0044462,GO:0044464,GO:0044764,GO:0046718,GO:0046930,GO:0050896,GO:0051179,GO:0051234,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051806,GO:0051828,GO:0055085,GO:0071944,GO:0098796 ko:K03286,ko:K03640 ko00000,ko02000 1.B.6,2.C.1.2 iECIAI1_1343.ECIAI1_0998,iECNA114_1301.ECNA114_1035,iECSF_1327.ECSF_0871,iUTI89_1310.UTI89_C1022 Bacteria 1N6EM@1224,2KP54@206350,2VM27@28216,COG2885@1,COG2885@2,COG3637@1,COG3637@2 NA|NA|NA M OprF membrane domain MAG.C3.5_01583 265072.Mfla_1579 1.7e-51 209.5 Nitrosomonadales 1.13.11.81,4.1.2.25,4.2.3.153,5.1.99.8 ko:K01633,ko:K09733 ko00680,ko00790,ko01100,map00680,map00790,map01100 M00126,M00840 R03504,R10935,R11037,R11073 RC00721,RC00943,RC01479,RC03315,RC03333,RC03334 ko00000,ko00001,ko00002,ko01000 Bacteria 1RGX0@1224,2KP82@206350,2VX74@28216,COG1891@1,COG1891@2 NA|NA|NA S 4-HFC-P synthase MAG.C3.5_01584 265072.Mfla_1580 1.1e-64 253.1 Nitrosomonadales ko:K09154 ko00000 Bacteria 1RD0V@1224,2KMR7@206350,2VS9E@28216,COG2457@1,COG2457@2 NA|NA|NA S Protein of unknown function (DUF447) MAG.C3.5_01585 582744.Msip34_1684 7.9e-210 736.5 Nitrosomonadales prtA 3.2.1.23 ko:K01190,ko:K07004,ko:K13277 ko00052,ko00511,ko00600,ko01100,ko02024,map00052,map00511,map00600,map01100,map02024 R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000,ko01002,ko03110 Bacteria 1QY39@1224,2KPA6@206350,2WH9V@28216,COG1404@1,COG1404@2 NA|NA|NA O Belongs to the peptidase S8 family MAG.C3.5_01586 582744.Msip34_1685 1.1e-82 312.8 Nitrosomonadales spoVFB 1.2.7.3 ko:K00176,ko:K06411 ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200 M00009,M00011,M00173,M00620 R01197 RC00004,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 1RD5I@1224,2KMI2@206350,2VQ1A@28216,COG1036@1,COG1036@2 NA|NA|NA C PFAM Flavoprotein MAG.C3.5_01587 582744.Msip34_1686 3.2e-229 800.8 Nitrosomonadales purA GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046033,GO:0046040,GO:0046085,GO:0046086,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.4 ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 M00049 R01135 RC00458,RC00459 ko00000,ko00001,ko00002,ko01000 iECNA114_1301.ECNA114_4393,iECSF_1327.ECSF_4063,iJN746.PP_4889 Bacteria 1MU5B@1224,2KM3G@206350,2VHBR@28216,COG0104@1,COG0104@2 NA|NA|NA F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP MAG.C3.5_01588 582744.Msip34_1687 2.2e-165 588.6 Nitrosomonadales hisZ 2.4.2.17,6.1.1.21 ko:K00765,ko:K01892,ko:K02502 ko00340,ko00970,ko01100,ko01110,ko01230,map00340,map00970,map01100,map01110,map01230 M00026,M00359,M00360 R01071,R03655 RC00055,RC00523,RC02819,RC03200 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1MWIG@1224,2KKH5@206350,2VHVX@28216,COG3705@1,COG3705@2 NA|NA|NA E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine MAG.C3.5_01589 582744.Msip34_1688 2.7e-14 84.0 Nitrosomonadales yjeT ko:K09937 ko00000 Bacteria 1NG9Q@1224,2KN84@206350,2VXNJ@28216,COG3242@1,COG3242@2 NA|NA|NA S Uncharacterized protein conserved in bacteria (DUF2065) MAG.C3.5_01590 265072.Mfla_1586 6.3e-109 400.6 Nitrosomonadales hflC GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0016020,GO:0016021,GO:0016787,GO:0019538,GO:0031224,GO:0031226,GO:0031233,GO:0032991,GO:0043086,GO:0043170,GO:0044092,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0098796,GO:0140096,GO:1901564 ko:K04087 M00742 ko00000,ko00002,ko01000 Bacteria 1MV7R@1224,2KM4X@206350,2VI9W@28216,COG0330@1,COG0330@2 NA|NA|NA O HflC and HflK could regulate a protease MAG.C3.5_01591 582744.Msip34_1690 6.2e-184 650.2 Nitrosomonadales hflK GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0016020,GO:0016021,GO:0016787,GO:0019538,GO:0031224,GO:0031226,GO:0031233,GO:0032991,GO:0043086,GO:0043170,GO:0044092,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0098796,GO:0140096,GO:1901564 ko:K04088 M00742 ko00000,ko00002,ko01000 Bacteria 1MUM2@1224,2KKRU@206350,2VIG2@28216,COG0330@1,COG0330@2 NA|NA|NA O HflC and HflK could encode or regulate a protease MAG.C3.5_01592 1236959.BAMT01000013_gene2989 1.6e-165 589.0 Nitrosomonadales hflX GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0003924,GO:0005488,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006417,GO:0006464,GO:0006468,GO:0006518,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006996,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016310,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018105,GO:0018193,GO:0018209,GO:0019001,GO:0019222,GO:0019538,GO:0019843,GO:0022411,GO:0030554,GO:0031323,GO:0031326,GO:0032268,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0032790,GO:0032984,GO:0032988,GO:0034248,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0036211,GO:0036289,GO:0043021,GO:0043022,GO:0043023,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0071826,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008,GO:2000112 ko:K03665 ko00000,ko03009 Bacteria 1MUA0@1224,2KM54@206350,2VI86@28216,COG2262@1,COG2262@2 NA|NA|NA S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis MAG.C3.5_01593 582744.Msip34_1692 6.4e-32 142.9 Nitrosomonadales hfq GO:0003674,GO:0003676,GO:0003677,GO:0003681,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006417,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016246,GO:0016441,GO:0016458,GO:0017148,GO:0019222,GO:0022607,GO:0022613,GO:0022618,GO:0030423,GO:0031047,GO:0031123,GO:0031124,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032268,GO:0032269,GO:0032270,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0034641,GO:0035194,GO:0040029,GO:0040033,GO:0043170,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045727,GO:0045974,GO:0045975,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:2000112,GO:2000113 ko:K03666 ko02024,ko03018,ko05111,map02024,map03018,map05111 ko00000,ko00001,ko03019,ko03036 Bacteria 1MZM1@1224,2KN6R@206350,2VTXK@28216,COG1923@1,COG1923@2 NA|NA|NA J RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs MAG.C3.5_01594 582744.Msip34_1693 2e-226 791.6 Nitrosomonadales gltX GO:0003674,GO:0003824,GO:0004812,GO:0004818,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006424,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.17,6.1.1.24 ko:K01885,ko:K09698 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 M00121,M00359,M00360 R03651,R05578 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 iEC042_1314.EC042_2616,iIT341.HP0476 Bacteria 1MUCR@1224,2KKGW@206350,2VH5S@28216,COG0008@1,COG0008@2 NA|NA|NA J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) MAG.C3.5_01595 582744.Msip34_1695 4.9e-188 664.1 Nitrosomonadales ko:K18139 ko01501,ko02024,map01501,map02024 M00642,M00643,M00647,M00718,M00768,M00822 ko00000,ko00001,ko00002,ko01504,ko02000 1.B.17,2.A.6.2 Bacteria 1MUA8@1224,2KM23@206350,2VI5V@28216,COG1538@1,COG1538@2 NA|NA|NA MU TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family MAG.C3.5_01596 666681.M301_0939 0.0 1678.3 Nitrosomonadales ko:K03296,ko:K18138 ko01501,ko01503,map01501,map01503 M00647,M00699,M00718 ko00000,ko00001,ko00002,ko01504,ko02000 2.A.6.2 Bacteria 1MU48@1224,2KM51@206350,2VHFI@28216,COG0841@1,COG0841@2 NA|NA|NA V Hydrophobe Amphiphile Efflux-1 (HAE1) Family MAG.C3.5_01597 1266925.JHVX01000003_gene440 1.9e-137 495.7 Nitrosomonadales cmeA ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 Bacteria 1MU78@1224,2VINC@28216,371V6@32003,COG0845@1,COG0845@2 NA|NA|NA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family MAG.C3.5_01598 583345.Mmol_0883 4.8e-38 164.1 Nitrosomonadales Bacteria 1PJGW@1224,2A8J8@1,2KMZV@206350,2W7ZN@28216,30XMH@2 NA|NA|NA MAG.C3.5_01599 582744.Msip34_1701 8e-233 812.8 Nitrosomonadales rimO 2.8.4.4 ko:K14441 R10652 RC00003,RC03217 ko00000,ko01000,ko03009 Bacteria 1MU7N@1224,2KMFV@206350,2VI16@28216,COG0621@1,COG0621@2 NA|NA|NA J Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 MAG.C3.5_01600 582744.Msip34_1702 2.2e-18 97.8 Nitrosomonadales Bacteria 1N9R9@1224,2E3TT@1,2KNYQ@206350,2VW0P@28216,32YR7@2 NA|NA|NA MAG.C3.5_01601 1101195.Meth11DRAFT_0988 1.1e-102 379.8 Nitrosomonadales ko:K11021,ko:K16267 ko00000,ko02000,ko02042 2.A.5.4.11 Bacteria 1R40E@1224,2KKCZ@206350,2VN69@28216,COG0428@1,COG0428@2 NA|NA|NA P ZIP Zinc transporter MAG.C3.5_01602 265072.Mfla_1611 1.2e-92 346.3 Nitrosomonadales yfiH ko:K05810 ko00000,ko01000 Bacteria 1MW2H@1224,2KKNJ@206350,2VKD4@28216,COG1496@1,COG1496@2 NA|NA|NA S Belongs to the multicopper oxidase YfiH RL5 family MAG.C3.5_01603 582744.Msip34_1708 1.2e-143 516.2 Nitrosomonadales rluD GO:0000027,GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022607,GO:0022613,GO:0022618,GO:0031118,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 5.4.99.23,5.4.99.28,5.4.99.29 ko:K06177,ko:K06180 ko00000,ko01000,ko03009,ko03016 iE2348C_1286.E2348C_2868,iECED1_1282.ECED1_3035,iECSF_1327.ECSF_2432 Bacteria 1MUBN@1224,2KKXP@206350,2VIFF@28216,COG0564@1,COG0564@2 NA|NA|NA J Responsible for synthesis of pseudouridine from uracil MAG.C3.5_01604 582744.Msip34_1709 1.1e-123 449.5 Nitrosomonadales bamD GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 ko:K05807,ko:K08309 ko00000,ko01000,ko01011,ko02000 1.B.33.1 GH23 Bacteria 1MVS5@1224,2KKI6@206350,2VH6I@28216,COG4105@1,COG4105@2 NA|NA|NA M Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane MAG.C3.5_01605 582744.Msip34_1710 4.6e-201 707.2 Nitrosomonadales der GO:0000027,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022607,GO:0022613,GO:0022618,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032794,GO:0034622,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0042273,GO:0043021,GO:0043022,GO:0043023,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363 ko:K03977 ko00000,ko03009 Bacteria 1MU9S@1224,2KKDH@206350,2VI8D@28216,COG1160@1,COG1160@2 NA|NA|NA S GTPase that plays an essential role in the late steps of ribosome biogenesis MAG.C3.5_01606 582744.Msip34_1239 3.2e-260 904.8 Nitrosomonadales lidB 3.1.11.5 ko:K01144 ko00000,ko01000 Bacteria 1QU90@1224,2KMEP@206350,2VHNR@28216,COG2887@1,COG2887@2 NA|NA|NA L PD-(D/E)XK nuclease superfamily MAG.C3.5_01607 265072.Mfla_1753 6.8e-76 290.0 Nitrosomonadales greB GO:0006139,GO:0006351,GO:0006352,GO:0006354,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010604,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031325,GO:0031326,GO:0031437,GO:0031439,GO:0032774,GO:0032784,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903311,GO:1903313,GO:1903506,GO:2000112,GO:2001141 ko:K04760 ko00000,ko03021 Bacteria 1RAP0@1224,2KMPR@206350,2VQ09@28216,COG0782@1,COG0782@2 NA|NA|NA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length MAG.C3.5_01608 265072.Mfla_1754 3.3e-93 348.6 Nitrosomonadales Bacteria 1MYVF@1224,2KKKY@206350,2VHIB@28216,COG4394@1,COG4394@2 NA|NA|NA S Uncharacterized protein conserved in bacteria (DUF2331) MAG.C3.5_01609 582744.Msip34_1236 3.3e-95 354.4 Nitrosomonadales efp GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02356 ko00000,ko03012 Bacteria 1MW2J@1224,2KKB2@206350,2VH4A@28216,COG0231@1,COG0231@2 NA|NA|NA J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase MAG.C3.5_01610 159087.Daro_2916 5.2e-27 127.5 Betaproteobacteria ko:K08998 ko00000 Bacteria 1Q3VC@1224,2VXQF@28216,COG0759@1,COG0759@2 NA|NA|NA S Haemolytic MAG.C3.5_01611 582744.Msip34_0219 1.4e-78 299.3 Nitrosomonadales hda GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006275,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008156,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030174,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:2000104,GO:2000112,GO:2000113 ko:K02313,ko:K10763 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 Bacteria 1MVW6@1224,2KKKA@206350,2VSFD@28216,COG0593@1,COG0593@2 NA|NA|NA L TIGRFAM DnaA regulatory inactivator Hda MAG.C3.5_01612 582744.Msip34_0220 2.1e-117 429.1 Nitrosomonadales perM 6.3.2.6 ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04591 RC00064,RC00162 ko00000,ko00001,ko00002,ko01000 Bacteria 1MW0B@1224,2KMHK@206350,2VHDW@28216,COG0628@1,COG0628@2 NA|NA|NA K AI-2E family transporter MAG.C3.5_01613 582744.Msip34_0221 4.9e-172 610.5 Nitrosomonadales purM GO:0003674,GO:0003824,GO:0004641,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.1,6.3.4.13 ko:K01933,ko:K11788 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04144,R04208 RC00090,RC00166,RC01100 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_1844,iECSF_1327.ECSF_2340 Bacteria 1MURG@1224,2KM3Y@206350,2VHJT@28216,COG0150@1,COG0150@2 NA|NA|NA F PFAM AIR synthase related protein MAG.C3.5_01614 582744.Msip34_0222 1.9e-81 308.9 Nitrosomonadales bcsB ko:K08086,ko:K20541 ko00000,ko02000 4.D.3.1.6 Bacteria 1N3SZ@1224,2KMWK@206350,2VU3V@28216,COG3170@1,COG3170@2 NA|NA|NA NU Protein of unknown function (DUF3108) MAG.C3.5_01615 1236959.BAMT01000006_gene388 4.5e-58 231.9 Nitrosomonadales 3.1.26.12 ko:K03749,ko:K08300,ko:K09859 ko03018,map03018 M00394 ko00000,ko00001,ko00002,ko01000,ko03009,ko03019 Bacteria 1RCIU@1224,2KMRI@206350,2WHQJ@28216,COG3147@1,COG3147@2 NA|NA|NA S Protein of unknown function (DUF3108) MAG.C3.5_01616 582744.Msip34_0224 9.7e-186 656.4 Nitrosomonadales sun GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 ko:K03500 ko00000,ko01000,ko03009 Bacteria 1MV2Q@1224,2KKKZ@206350,2VI1D@28216,COG0144@1,COG0144@2 NA|NA|NA J Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family MAG.C3.5_01617 1288494.EBAPG3_10990 3.7e-163 581.3 Nitrosomonadales Bacteria 1MU0Q@1224,2VJ87@28216,37294@32003,COG1301@1,COG1301@2 NA|NA|NA U Sodium:dicarboxylate symporter family MAG.C3.5_01618 1165096.ARWF01000001_gene1313 1.7e-72 278.9 Nitrosomonadales Bacteria 1RH4M@1224,2KP7Z@206350,2W4KZ@28216,COG0454@1,COG0456@2 NA|NA|NA K Acetyltransferase (GNAT) domain MAG.C3.5_01619 720554.Clocl_0922 3.4e-07 61.6 Ruminococcaceae Bacteria 1W5NA@1239,255SP@186801,2C0NX@1,2ZGH9@2,3WQP2@541000 NA|NA|NA MAG.C3.5_01620 296591.Bpro_2306 7.9e-46 189.9 Comamonadaceae Bacteria 1MZMZ@1224,2VV6G@28216,4AFCR@80864,COG5478@1,COG5478@2 NA|NA|NA S Low affinity iron permease MAG.C3.5_01621 265072.Mfla_0211 0.0 1413.3 Nitrosomonadales acrD4 ko:K03296 ko00000 2.A.6.2 Bacteria 1MU48@1224,2KM6C@206350,2VHFI@28216,COG0841@1,COG0841@2 NA|NA|NA V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family MAG.C3.5_01622 265072.Mfla_0212 2.2e-114 419.1 Nitrosomonadales Bacteria 1MXGH@1224,2KM1N@206350,2VIDH@28216,COG0845@1,COG0845@2 NA|NA|NA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family MAG.C3.5_01623 582744.Msip34_0228 3e-69 268.1 Nitrosomonadales ampD GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043167,GO:0043169,GO:0043170,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.5.1.28 ko:K03806 ko00000,ko01000,ko01011 iAF1260.b0110,iB21_1397.B21_00108,iBWG_1329.BWG_0103,iEC55989_1330.EC55989_0103,iECBD_1354.ECBD_3509,iECB_1328.ECB_00109,iECDH10B_1368.ECDH10B_0090,iECDH1ME8569_1439.ECDH1ME8569_0104,iECD_1391.ECD_00109,iECIAI1_1343.ECIAI1_0107,iECO103_1326.ECO103_0110,iECO111_1330.ECO111_0111,iECO26_1355.ECO26_0112,iECSE_1348.ECSE_0110,iECW_1372.ECW_m0107,iEKO11_1354.EKO11_3806,iETEC_1333.ETEC_0106,iEcDH1_1363.EcDH1_3492,iEcE24377_1341.EcE24377A_0112,iEcHS_1320.EcHS_A0114,iEcolC_1368.EcolC_3549,iJO1366.b0110,iSFV_1184.SFV_0101,iSF_1195.SF0107,iSFxv_1172.SFxv_0113,iS_1188.S0109,iUMNK88_1353.UMNK88_108,iWFL_1372.ECW_m0107,iY75_1357.Y75_RS00560 Bacteria 1RDHU@1224,2KMMZ@206350,2VR5A@28216,COG3023@1,COG3023@2 NA|NA|NA V PFAM N-acetylmuramoyl-L-alanine amidase MAG.C3.5_01624 582744.Msip34_0229 6.4e-142 510.4 Nitrosomonadales ko:K07301 ko00000,ko02000 2.A.19.5 Bacteria 1PMXR@1224,2KM61@206350,2VNME@28216,COG0530@1,COG0530@2 NA|NA|NA P PFAM sodium calcium exchanger MAG.C3.5_01625 265072.Mfla_0214 1.5e-98 365.9 Nitrosomonadales pilR ko:K02667 ko02020,map02020 M00501 ko00000,ko00001,ko00002,ko02022,ko02035 Bacteria 1MU0N@1224,2KM7S@206350,2VHSB@28216,COG2204@1,COG2204@2 NA|NA|NA T PFAM sigma-54 factor interaction domain-containing protein MAG.C3.5_01626 375286.mma_0635 5.7e-95 354.4 Oxalobacteraceae yvfF ko:K19431 ko00000,ko01000 Bacteria 1RBQD@1224,2VUCJ@28216,475Z4@75682,COG5039@1,COG5039@2 NA|NA|NA GM Polysaccharide pyruvyl transferase MAG.C3.5_01627 1227349.C170_15605 9e-27 128.3 Paenibacillaceae Bacteria 1V8VR@1239,26T7A@186822,4HNZI@91061,COG2244@1,COG2244@2 NA|NA|NA S Membrane protein involved in the export of O-antigen and teichoic acid MAG.C3.5_01628 666681.M301_2271 4.7e-88 331.3 Nitrosomonadales epsG 2.7.10.1 ko:K08252 ko00000,ko01000 Bacteria 1MVI9@1224,2KMGB@206350,2VN0C@28216,COG0489@1,COG0489@2 NA|NA|NA D Chain length determinant protein tyrosine kinase EpsG MAG.C3.5_01629 666681.M301_2272 2.5e-123 449.1 Nitrosomonadales epsF Bacteria 1RK0N@1224,2KMI9@206350,2VHPS@28216,COG3206@1,COG3206@2 NA|NA|NA M TIGRFAM chain length determinant protein EpsF MAG.C3.5_01630 582744.Msip34_1836 2.4e-102 379.0 Nitrosomonadales epsE ko:K01991,ko:K20988 ko02026,ko05111,map02026,map05111 ko00000,ko00001,ko02000 1.B.18 Bacteria 1N7GP@1224,2KP58@206350,2VIY9@28216,COG1596@1,COG1596@2 NA|NA|NA M TIGRFAM polysaccharide export protein EpsE MAG.C3.5_01631 265072.Mfla_1926 6.2e-40 170.6 Nitrosomonadales ko:K10716 ko00000,ko02000 1.A.1.1,1.A.1.13,1.A.1.17,1.A.1.24,1.A.1.25,1.A.1.6 Bacteria 1QY3A@1224,2KMZM@206350,2WH9Y@28216,COG2905@1,COG2905@2 NA|NA|NA K Cyclic nucleotide-monophosphate binding domain MAG.C3.5_01632 582744.Msip34_1840 3.6e-71 275.0 Nitrosomonadales ko:K04333 ko02026,map02026 ko00000,ko00001,ko03000 Bacteria 1RG6R@1224,2KKJV@206350,2VRUT@28216,COG2197@1,COG2197@2 NA|NA|NA K TIGRFAM transcriptional regulator EpsA MAG.C3.5_01633 582744.Msip34_1841 5.1e-177 627.5 Nitrosomonadales epsB ko:K03606,ko:K13012 ko05111,map05111 ko00000,ko00001,ko01005 Bacteria 1MV6W@1224,2KKVU@206350,2VH0H@28216,COG2148@1,COG2148@2 NA|NA|NA M TIGRFAM Undecaprenyl-phosphate glucose phosphotransferase MAG.C3.5_01634 265072.Mfla_2623 3.1e-28 131.3 Nitrosomonadales Bacteria 1NIUW@1224,2KNYT@206350,2VXP4@28216,COG5652@1,COG5652@2 NA|NA|NA S VanZ like family MAG.C3.5_01636 582744.Msip34_2108 4.3e-20 103.2 Nitrosomonadales 3.4.21.88 ko:K01356,ko:K03503 M00729 ko00000,ko00002,ko01000,ko01002,ko03400 Bacteria 1MW80@1224,2KMUY@206350,2VS2C@28216,COG1974@1,COG1974@2 NA|NA|NA L Peptidase S24-like MAG.C3.5_01637 582744.Msip34_1870 1.7e-69 268.9 Betaproteobacteria 3.1.3.27,3.1.3.4,3.1.3.81,3.6.1.27 ko:K01096,ko:K19302 ko00550,ko00564,ko01100,map00550,map00564,map01100 R02029,R05627 RC00002,RC00017 ko00000,ko00001,ko01000,ko01011 Bacteria 1RHGF@1224,2WEWF@28216,COG0671@1,COG0671@2 NA|NA|NA I PAP2 superfamily MAG.C3.5_01638 1502770.JQMG01000001_gene65 8.7e-92 344.0 Nitrosomonadales Bacteria 1R35E@1224,28IX1@1,2KKKU@206350,2VQUH@28216,2ZC5T@2 NA|NA|NA S Protein of unknown function (DUF2914) MAG.C3.5_01639 582744.Msip34_1871 2.5e-197 694.9 Nitrosomonadales glmM GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006040,GO:0006047,GO:0006048,GO:0006139,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008966,GO:0009058,GO:0009225,GO:0009226,GO:0009987,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0018130,GO:0019438,GO:0019538,GO:0034641,GO:0034654,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046349,GO:0046483,GO:0046777,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901576 5.4.2.10 ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 R02060 RC00408 ko00000,ko00001,ko01000 iAF987.Gmet_1886,iLJ478.TM0184,iSB619.SA_RS11275,iSBO_1134.SBO_3206 Bacteria 1MU24@1224,2KKGB@206350,2VI3U@28216,COG1109@1,COG1109@2 NA|NA|NA G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate MAG.C3.5_01640 582744.Msip34_1872 4.7e-100 370.9 Nitrosomonadales folP GO:0003674,GO:0003824,GO:0004156,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042221,GO:0042364,GO:0042398,GO:0042493,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046655,GO:0046656,GO:0050896,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.15 ko:K00796 ko00790,ko01100,map00790,map01100 M00126,M00841 R03066,R03067 RC00121,RC00842 ko00000,ko00001,ko00002,ko01000 iECO103_1326.ECO103_3924,iPC815.YPO3501 Bacteria 1MUIR@1224,2KKPU@206350,2VH2Q@28216,COG0294@1,COG0294@2 NA|NA|NA H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives MAG.C3.5_01641 582744.Msip34_1873 0.0 1126.7 Nitrosomonadales ftsH GO:0000166,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0004222,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009056,GO:0009057,GO:0010468,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019538,GO:0030145,GO:0030163,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043273,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 ko:K03798 M00742 ko00000,ko00002,ko01000,ko01002,ko03110 Bacteria 1MU6J@1224,2KM49@206350,2VHEV@28216,COG0465@1,COG0465@2 NA|NA|NA O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins MAG.C3.5_01642 582744.Msip34_1874 1.8e-97 362.1 Nitrosomonadales ftsJ GO:0000027,GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008650,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022607,GO:0022613,GO:0022618,GO:0031167,GO:0032259,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.166 ko:K02427 ko00000,ko01000,ko03009 Bacteria 1MW1C@1224,2KKEA@206350,2VIU9@28216,COG0293@1,COG0293@2 NA|NA|NA J Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit MAG.C3.5_01643 1236959.BAMT01000001_gene1041 4e-36 157.1 Nitrosomonadales yhbY GO:0000027,GO:0000028,GO:0000966,GO:0000967,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0034470,GO:0034471,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0042274,GO:0043021,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360,GO:1990275 ko:K07574 ko00000,ko03009 Bacteria 1N8K5@1224,2KMZK@206350,2VVP0@28216,COG1534@1,COG1534@2 NA|NA|NA J CRS1_YhbY MAG.C3.5_01644 582744.Msip34_1876 6.9e-51 206.8 Nitrosomonadales Bacteria 1RJPF@1224,2AJXH@1,2KMQM@206350,2VTF5@28216,31AKJ@2 NA|NA|NA S Domain of unknown function (DUF4149) MAG.C3.5_01645 582744.Msip34_1877 1.7e-68 265.4 Nitrosomonadales greA GO:0001098,GO:0001108,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006351,GO:0006354,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016020,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0030312,GO:0031323,GO:0031326,GO:0032774,GO:0032784,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046677,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 ko:K03624 ko00000,ko03021 Bacteria 1RCXW@1224,2KMNE@206350,2VQ16@28216,COG0782@1,COG0782@2 NA|NA|NA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides MAG.C3.5_01646 582744.Msip34_1878 1.3e-208 732.3 Nitrosomonadales carB GO:0000050,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016020,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.5.5 ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUDZ@1224,2KKQ5@206350,2VI4A@28216,COG0458@1,COG0458@2 NA|NA|NA EF PFAM Carbamoyl-phosphate synthase L chain MAG.C3.5_01648 1165096.ARWF01000001_gene595 2.1e-74 285.0 Nitrosomonadales ko:K09958 ko00000 Bacteria 1RA64@1224,2KNRG@206350,2VQAI@28216,COG3558@1,COG3558@2 NA|NA|NA S Protein of unknown function (DUF1348) MAG.C3.5_01649 582744.Msip34_0785 8.9e-73 280.4 Nitrosomonadales motB ko:K02557 ko02030,ko02040,map02030,map02040 ko00000,ko00001,ko02000,ko02035 1.A.30.1 Bacteria 1MU4S@1224,2KMP0@206350,2VKC4@28216,COG1360@1,COG1360@2 NA|NA|NA N PFAM OmpA MotB domain protein MAG.C3.5_01650 265072.Mfla_1949 6.3e-86 323.9 Nitrosomonadales motC ko:K02556 ko02020,ko02030,ko02040,map02020,map02030,map02040 ko00000,ko00001,ko02000,ko02035 1.A.30.1 Bacteria 1MXK3@1224,2KKYS@206350,2VNCG@28216,COG1291@1,COG1291@2 NA|NA|NA N PFAM MotA TolQ ExbB proton channel MAG.C3.5_01651 582744.Msip34_0787 2.4e-106 391.7 Nitrosomonadales fliA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K02405 ko02020,ko02025,ko02026,ko02040,ko05111,map02020,map02025,map02026,map02040,map05111 ko00000,ko00001,ko02035,ko03021 Bacteria 1MWEU@1224,2KKUV@206350,2VHR3@28216,COG1191@1,COG1191@2 NA|NA|NA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes MAG.C3.5_01652 1132855.KB913035_gene1300 2e-64 252.7 Nitrosomonadales fleN ko:K02282,ko:K04562 ko00000,ko02035,ko02044 Bacteria 1R8IW@1224,2KMU6@206350,2VRTK@28216,COG0455@1,COG0455@2 NA|NA|NA D Belongs to the ParA family MAG.C3.5_01653 582744.Msip34_0789 6.6e-142 510.8 Nitrosomonadales flhF ko:K02404 ko00000,ko02035 Bacteria 1MUQW@1224,2KKQQ@206350,2VHVZ@28216,COG1419@1,COG1419@2 NA|NA|NA N PFAM GTP-binding signal recognition particle SRP54 G- domain MAG.C3.5_01654 583345.Mmol_1268 8.6e-311 1072.4 Nitrosomonadales flhA GO:0005575,GO:0005623,GO:0005886,GO:0006996,GO:0008150,GO:0009987,GO:0016020,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0044085,GO:0044464,GO:0044780,GO:0044781,GO:0070925,GO:0071840,GO:0071944 ko:K02400 ko02040,map02040 ko00000,ko00001,ko02035,ko02044 3.A.6.2,3.A.6.3 Bacteria 1MUF3@1224,2KKSD@206350,2VHVC@28216,COG1298@1,COG1298@2 NA|NA|NA N Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin MAG.C3.5_01655 1165096.ARWF01000001_gene893 4.7e-136 491.1 Nitrosomonadales flhB GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02401,ko:K02556,ko:K03229,ko:K04061,ko:K13820 ko02020,ko02030,ko02040,ko03070,map02020,map02030,map02040,map03070 M00332,M00542,M00660 ko00000,ko00001,ko00002,ko02000,ko02035,ko02044 1.A.30.1,3.A.6.1,3.A.6.2,3.A.6.3 Bacteria 1MUWI@1224,2KMIP@206350,2VIH0@28216,COG1377@1,COG1377@2 NA|NA|NA N Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin MAG.C3.5_01656 582744.Msip34_2108 5.8e-71 273.9 Nitrosomonadales 3.4.21.88 ko:K01356,ko:K03503 M00729 ko00000,ko00002,ko01000,ko01002,ko03400 Bacteria 1MW80@1224,2KMUY@206350,2VS2C@28216,COG1974@1,COG1974@2 NA|NA|NA L Peptidase S24-like MAG.C3.5_01658 582744.Msip34_1419 1.9e-118 432.2 Nitrosomonadales hpnC 2.5.1.32,2.5.1.99,4.2.3.156 ko:K02291,ko:K21679 ko00906,ko01062,ko01100,ko01110,map00906,map01062,map01100,map01110 M00097 R02065,R04218,R07270,R10177 RC00362,RC01101,RC02869 ko00000,ko00001,ko00002,ko01000,ko01006 Bacteria 1N6J2@1224,2KM9Z@206350,2VIZC@28216,COG1562@1,COG1562@2 NA|NA|NA I TIGRFAM squalene synthase HpnC MAG.C3.5_01659 582744.Msip34_1418 1.2e-103 382.9 Nitrosomonadales mtaP 2.4.2.28,2.4.2.44 ko:K00772,ko:K19696 ko00270,ko01100,map00270,map01100 M00034 R01402,R09668 RC00063,RC02819 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUWW@1224,2KKQJ@206350,2VJQQ@28216,COG0005@1,COG0005@2 NA|NA|NA F Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage MAG.C3.5_01660 582744.Msip34_1417 5.9e-86 323.6 Nitrosomonadales def2 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 ko:K01462 ko00000,ko01000 Bacteria 1R9XK@1224,2KKUN@206350,2VQ0U@28216,COG0242@1,COG0242@2 NA|NA|NA J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions MAG.C3.5_01662 585.DR95_3196 1.8e-07 62.8 Gammaproteobacteria Bacteria 1N65D@1224,1S978@1236,2ADK0@1,313AF@2 NA|NA|NA S SMI1-KNR4 cell-wall MAG.C3.5_01664 666681.M301_0552 0.0 1251.5 Nitrosomonadales 2.7.7.65 ko:K21023 ko02025,map02025 ko00000,ko00001,ko01000 Bacteria 1MU2C@1224,2KKZP@206350,2VH3V@28216,COG2203@1,COG2203@2,COG5001@1,COG5001@2 NA|NA|NA T PFAM EAL domain protein MAG.C3.5_01665 666681.M301_0551 4.8e-145 521.2 Nitrosomonadales Bacteria 1N5T4@1224,2KMJ5@206350,2VK22@28216,COG2206@1,COG2206@2 NA|NA|NA T Domain of unknown function (DUF3391) MAG.C3.5_01666 1163617.SCD_n01384 2.6e-282 977.6 Betaproteobacteria recQ GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005657,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008270,GO:0009295,GO:0009378,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017116,GO:0017117,GO:0030894,GO:0032392,GO:0032508,GO:0032991,GO:0032993,GO:0033202,GO:0033554,GO:0034641,GO:0042623,GO:0043138,GO:0043140,GO:0043142,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044446,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494,GO:1904949 3.6.4.12 ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 Bacteria 1MVGG@1224,2VH8W@28216,COG0514@1,COG0514@2 NA|NA|NA L ATP-dependent DNA helicase RecQ MAG.C3.5_01667 1236959.BAMT01000002_gene2211 2.1e-26 125.6 Nitrosomonadales Bacteria 1MVUD@1224,2KKC7@206350,2VIYQ@28216,COG4409@1,COG4409@2 NA|NA|NA G exo-alpha-(2->6)-sialidase activity MAG.C3.5_01668 497321.C664_13127 4.6e-14 83.6 Rhodocyclales ko:K07727 ko00000,ko03000 Bacteria 1N9J3@1224,2KZ6K@206389,2VX89@28216,COG3655@1,COG3655@2 NA|NA|NA K Cro/C1-type HTH DNA-binding domain MAG.C3.5_01669 1123368.AUIS01000013_gene815 1.4e-74 286.6 Acidithiobacillales Bacteria 1R5Z9@1224,1T97C@1236,2NDZP@225057,COG4313@1,COG4313@2 NA|NA|NA C Protein involved in meta-pathway of phenol degradation MAG.C3.5_01671 314254.OA2633_07089 1.3e-19 102.4 Proteobacteria Bacteria 1P5B9@1224,28Z0K@1,2ZKT7@2 NA|NA|NA MAG.C3.5_01672 582744.Msip34_2347 9.8e-129 466.5 Nitrosomonadales ko:K02030,ko:K16254 ko00680,ko01120,map00680,map01120 M00236 ko00000,ko00001,ko00002,ko02000 3.A.1.3 Bacteria 1MWWZ@1224,2KMAA@206350,2VNAR@28216,COG0834@1,COG0834@2 NA|NA|NA ET SMART extracellular solute-binding protein, family 3 MAG.C3.5_01673 1101195.Meth11DRAFT_2329 9.3e-60 236.5 Nitrosomonadales Bacteria 1QBNV@1224,2KMPU@206350,2W7YT@28216,COG2010@1,COG2010@2 NA|NA|NA C Pfam cytochrome c MAG.C3.5_01674 582744.Msip34_2345 6.6e-61 240.4 Nitrosomonadales ko:K16255 ko00680,ko01120,map00680,map01120 ko00000,ko00001 Bacteria 1RJZG@1224,2KMK6@206350,2W3VV@28216,COG2010@1,COG2010@2 NA|NA|NA C PFAM cytochrome c MAG.C3.5_01675 582744.Msip34_2344 1.1e-218 765.8 Nitrosomonadales ndh 1.6.99.3 ko:K03885 ko00190,map00190 ko00000,ko00001,ko01000 Bacteria 1MX96@1224,2KMDP@206350,2VJR6@28216,COG1252@1,COG1252@2 NA|NA|NA C PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase MAG.C3.5_01676 582744.Msip34_2343 7.2e-177 626.7 Nitrosomonadales lplT ko:K08227 ko00000,ko02000 2.A.1.42 Bacteria 1QTWR@1224,2KPAT@206350,2VIC5@28216,COG0477@1,COG2814@2 NA|NA|NA EGP PFAM Major Facilitator Superfamily MAG.C3.5_01677 265072.Mfla_2309 3.9e-246 857.1 Nitrosomonadales phoH ko:K07175 ko00000 Bacteria 1MUX1@1224,2KM2C@206350,2VH4P@28216,COG1875@1,COG1875@2 NA|NA|NA T PFAM PhoH family protein MAG.C3.5_01678 1165096.ARWF01000001_gene1989 4.9e-65 253.8 Nitrosomonadales bcp GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 ko:K03564 ko00000,ko01000 Bacteria 1RD4R@1224,2KMRJ@206350,2VR4P@28216,COG1225@1,COG1225@2 NA|NA|NA O PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen MAG.C3.5_01679 582744.Msip34_2340 2.9e-191 674.9 Nitrosomonadales Bacteria 1RC7X@1224,2KKTN@206350,2VN1K@28216,COG4191@1,COG4191@2 NA|NA|NA T histidine kinase HAMP region domain protein MAG.C3.5_01680 1165096.ARWF01000001_gene1991 3.4e-17 95.5 Nitrosomonadales ko:K03832 ko00000,ko02000 2.C.1.1 Bacteria 1PE9F@1224,2KNAJ@206350,2VXP2@28216,COG0810@1,COG0810@2 NA|NA|NA M TIGRFAM TonB family protein MAG.C3.5_01681 582744.Msip34_2337 1.7e-109 402.5 Nitrosomonadales Bacteria 1MX4H@1224,2KM5B@206350,2VM8B@28216,COG0491@1,COG0491@2 NA|NA|NA S Metallo-beta-lactamase superfamily MAG.C3.5_01682 583345.Mmol_0017 3.8e-73 281.2 Nitrosomonadales ko:K12262 ko00000 Bacteria 1MZ7X@1224,2KKS2@206350,2VS28@28216,COG3038@1,COG3038@2 NA|NA|NA C PFAM cytochrome B561 MAG.C3.5_01683 582744.Msip34_2335 1.3e-105 389.4 Nitrosomonadales MA20_34470 ko:K17226 ko00920,ko01100,ko01120,map00920,map01100,map01120 M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002 Bacteria 1PB0I@1224,2KM3W@206350,2VNJJ@28216,COG5501@1,COG5501@2 NA|NA|NA S Sulphur oxidation protein SoxZ MAG.C3.5_01684 1218076.BAYB01000002_gene451 8.6e-42 176.4 Burkholderiaceae MA20_25940 ko:K08234 ko00000 Bacteria 1KHF4@119060,1N7R0@1224,2VV7K@28216,COG0346@1,COG0346@2 NA|NA|NA E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MAG.C3.5_01685 583345.Mmol_2038 2.5e-124 451.8 Nitrosomonadales moeA1 2.10.1.1 ko:K03750 ko00790,ko01100,map00790,map01100 R09735 RC03462 ko00000,ko00001,ko01000 Bacteria 1MVD5@1224,2KKRZ@206350,2VH78@28216,COG0303@1,COG0303@2 NA|NA|NA H PFAM MoeA domain protein domain I and II MAG.C3.5_01686 265072.Mfla_2486 8.9e-43 180.3 Nitrosomonadales mug 3.2.2.28 ko:K03649 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1REPV@1224,2KN4Q@206350,2VRAT@28216,COG3663@1,COG3663@2 NA|NA|NA L Uracil DNA glycosylase superfamily MAG.C3.5_01687 1101195.Meth11DRAFT_2530 6.3e-161 573.5 Nitrosomonadales gatB GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.12,6.3.5.6,6.3.5.7 ko:K01876,ko:K02434 ko00970,ko01100,map00970,map01100 M00359,M00360 R03905,R04212,R05577 RC00010,RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Bacteria 1MUKG@1224,2KKUJ@206350,2VI3A@28216,COG0064@1,COG0064@2 NA|NA|NA J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) MAG.C3.5_01688 1502770.JQMG01000001_gene711 5.2e-37 160.2 Nitrosomonadales ko:K17226,ko:K17227 ko00920,ko01100,ko01120,map00920,map01100,map01120 M00595 R10151 RC03151,RC03152 ko00000,ko00001,ko00002 Bacteria 1N097@1224,2KNAZ@206350,2VU95@28216,COG5501@1,COG5501@2 NA|NA|NA S PFAM Sulphur oxidation protein SoxZ MAG.C3.5_01689 640081.Dsui_3298 6.1e-217 760.4 Rhodocyclales ybaL ko:K03455 ko00000 2.A.37 Bacteria 1MV34@1224,2KVUD@206389,2VHSM@28216,COG1226@1,COG1226@2,COG4651@1,COG4651@2 NA|NA|NA P Belongs to the monovalent cation proton antiporter 2 (cpa2) transporter (TC 2.A.37) family MAG.C3.5_01690 1304883.KI912532_gene2783 2.9e-47 196.1 Rhodocyclales 4.6.1.1 ko:K01768 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000 Bacteria 1R7HC@1224,2KZQ7@206389,2VRXY@28216,COG0745@1,COG0745@2,COG2199@1,COG3290@1,COG3290@2,COG3706@2,COG3829@1,COG3829@2 NA|NA|NA T diguanylate cyclase MAG.C3.5_01691 1101195.Meth11DRAFT_1238 1.3e-251 875.9 Nitrosomonadales fixI GO:0003674,GO:0003824,GO:0005215,GO:0005388,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0008150,GO:0008324,GO:0015075,GO:0015085,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0070588,GO:0070838,GO:0071944,GO:0072511,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.4,3.6.3.54 ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 R00086 RC00002 ko00000,ko00001,ko01000 3.A.3.5 Bacteria 1MU08@1224,2KM5C@206350,2VJSM@28216,COG2217@1,COG2217@2 NA|NA|NA P ATPase, P-type (transporting), HAD superfamily, subfamily IC MAG.C3.5_01692 1101195.Meth11DRAFT_1239 3.8e-13 79.7 Nitrosomonadales ccoS Bacteria 1PUR3@1224,2KNBW@206350,2WAW7@28216,COG3197@1,COG3197@2 NA|NA|NA P TIGRFAM cytochrome oxidase maturation protein, cbb3-type MAG.C3.5_01693 666681.M301_1913 2.9e-260 904.0 Nitrosomonadales ccoN GO:0003674,GO:0003824,GO:0004129,GO:0005215,GO:0005488,GO:0005506,GO:0005507,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008144,GO:0008150,GO:0008152,GO:0008324,GO:0009055,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015002,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015672,GO:0015975,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0016310,GO:0016491,GO:0016675,GO:0016676,GO:0016705,GO:0017144,GO:0019411,GO:0019637,GO:0019646,GO:0019693,GO:0019825,GO:0020037,GO:0022857,GO:0022890,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0034641,GO:0036094,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045154,GO:0045333,GO:0046034,GO:0046483,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0055114,GO:0070069,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0097159,GO:0098655,GO:0098660,GO:0098662,GO:1901135,GO:1901360,GO:1901363,GO:1901564,GO:1902600 1.9.3.1 ko:K00404,ko:K15862 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00156 ko00000,ko00001,ko00002,ko01000 3.D.4.3 iIT341.HP0144 Bacteria 1MU18@1224,2KKTV@206350,2VIWB@28216,COG3278@1,COG3278@2 NA|NA|NA C TIGRFAM cytochrome c oxidase, cbb3-type, subunit I MAG.C3.5_01694 614083.AWQR01000005_gene923 2.5e-99 368.2 Comamonadaceae ccoO 1.9.3.1 ko:K00405,ko:K15862 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00156 ko00000,ko00001,ko00002,ko01000 3.D.4.3 iIT341.HP0145 Bacteria 1MXEY@1224,2VIJ2@28216,4ABQK@80864,COG2993@1,COG2993@2 NA|NA|NA C cytochrome c oxidase, cbb3-type, subunit II MAG.C3.5_01695 666681.M301_1915 6.9e-10 68.9 Nitrosomonadales ccoQ ko:K00407 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00156 ko00000,ko00001,ko00002 3.D.4.3 Bacteria 1PJSJ@1224,2KP11@206350,2W85S@28216,COG4736@1,COG4736@2 NA|NA|NA O PFAM Cbb3-type cytochrome oxidase component MAG.C3.5_01696 666681.M301_1916 1.1e-135 489.6 Nitrosomonadales ccoP ko:K00406 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00156 ko00000,ko00001,ko00002 3.D.4.3 iJN746.PP_4253 Bacteria 1MUCW@1224,2KMD1@206350,2VHGS@28216,COG2010@1,COG2010@2 NA|NA|NA C C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex MAG.C3.5_01697 1132855.KB913035_gene2088 1.2e-202 712.6 Nitrosomonadales ccoG Bacteria 1MVFY@1224,2KKZG@206350,2VHRH@28216,COG0348@1,COG0348@2 NA|NA|NA C TIGRFAM cytochrome c oxidase accessory protein MAG.C3.5_01698 583345.Mmol_0717 2.7e-26 124.4 Betaproteobacteria ccoH ko:K09926 ko00000 Bacteria 1N8D0@1224,2VWBW@28216,COG3198@1,COG3198@2 NA|NA|NA S FixH MAG.C3.5_01699 1132855.KB913035_gene1704 3.3e-122 444.5 Betaproteobacteria Bacteria 1N2Y0@1224,2VH72@28216,COG0426@1,COG0426@2 NA|NA|NA C PFAM beta-lactamase domain protein MAG.C3.5_01701 580332.Slit_0397 1.3e-40 172.2 Nitrosomonadales GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0016289,GO:0016787,GO:0016788,GO:0016790,GO:0042802,GO:0042803,GO:0046983 3.1.2.29 ko:K18700 ko00000,ko01000 Bacteria 1RKFT@1224,2VV65@28216,44WEX@713636,COG5496@1,COG5496@2 NA|NA|NA S Thioesterase MAG.C3.5_01703 582744.Msip34_2109 5.2e-132 477.6 Nitrosomonadales MA20_36195 ko:K09919 ko00000 Bacteria 1MU35@1224,2KKBK@206350,2VH0Z@28216,COG3146@1,COG3146@2 NA|NA|NA S Peptidogalycan biosysnthesis/recognition MAG.C3.5_01704 582744.Msip34_2110 9.8e-11 72.4 Nitrosomonadales osmB ko:K04062 ko00000 Bacteria 1NPIC@1224,2C5IZ@1,2KNAF@206350,2VVUV@28216,33B4P@2 NA|NA|NA M Glycine zipper 2TM domain MAG.C3.5_01705 582744.Msip34_2111 2.7e-24 118.6 Nitrosomonadales Bacteria 1P5Q9@1224,2KN9J@206350,2VXYA@28216,COG5126@1,COG5126@2 NA|NA|NA DTZ Ca2 -binding protein (EF-Hand superfamily MAG.C3.5_01706 265072.Mfla_0654 2.3e-117 428.3 Nitrosomonadales Bacteria 1MY3D@1224,2KKH4@206350,2VI6B@28216,COG0745@1,COG0745@2 NA|NA|NA T PFAM response regulator receiver MAG.C3.5_01707 1236959.BAMT01000004_gene830 1.2e-188 666.0 Nitrosomonadales Bacteria 1MUAK@1224,2KM7A@206350,2VJ6W@28216,COG0642@1,COG2205@2 NA|NA|NA T PhoQ Sensor MAG.C3.5_01708 265072.Mfla_0652 8e-151 540.0 Nitrosomonadales cysG GO:0003674,GO:0003824,GO:0004851,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008757,GO:0009058,GO:0009628,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019354,GO:0019438,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046156,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.76,2.1.1.107,2.1.1.131,3.7.1.12,4.2.1.75,4.99.1.3,4.99.1.4 ko:K02302,ko:K02303,ko:K02304,ko:K03795,ko:K13541,ko:K13542 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R02864,R03165,R03194,R03947,R05180,R05807,R05809,R07772 RC00003,RC00871,RC01012,RC01034,RC01293,RC01545,RC01861,RC02097,RC03471 ko00000,ko00001,ko00002,ko01000 iECIAI1_1343.ECIAI1_3507,iECSE_1348.ECSE_3630,iEcE24377_1341.EcE24377A_3838,iJN746.PP_3999,iPC815.YPO0158 Bacteria 1MUI0@1224,2KKMV@206350,2VICS@28216,COG0007@1,COG0007@2,COG1648@1,COG1648@2 NA|NA|NA H Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme MAG.C3.5_01709 1286106.MPL1_04642 8.4e-103 379.8 Thiotrichales Bacteria 1MUMH@1224,1RNBY@1236,4637B@72273,COG0247@1,COG0247@2 NA|NA|NA C Fe-S oxidoreductase MAG.C3.5_01710 265072.Mfla_0522 1.8e-106 392.1 Nitrosomonadales ffh GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006605,GO:0006612,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0030312,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0040007,GO:0042886,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046907,GO:0048500,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0071944,GO:0072657,GO:0090150,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1990904 3.6.5.4 ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko01000,ko02044 3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9 Bacteria 1MVIA@1224,2KKP4@206350,2VJ3W@28216,COG0541@1,COG0541@2 NA|NA|NA U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components MAG.C3.5_01713 194439.CT1072 6e-51 207.2 Chlorobi tlpA Bacteria 1FE88@1090,COG0526@1,COG0526@2 NA|NA|NA CO PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen MAG.C3.5_01714 319225.Plut_1571 1.3e-15 88.6 Chlorobi Bacteria 1FFJG@1090,2E3QA@1,32YN8@2 NA|NA|NA M Domain of unknown function (DUF4266) MAG.C3.5_01715 319225.Plut_1570 9.4e-102 377.1 Chlorobi Bacteria 1FE94@1090,COG2831@1,COG2831@2 NA|NA|NA U Protein of unknown function (DUF3570) MAG.C3.5_01716 1198452.Jab_1c05920 1.4e-100 372.9 Oxalobacteraceae apbE 2.7.1.180 ko:K03734 ko00000,ko01000 Bacteria 1MW6K@1224,2VPGP@28216,472BX@75682,COG1477@1,COG1477@2 NA|NA|NA H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein MAG.C3.5_01717 582744.Msip34_1243 1e-28 135.2 Betaproteobacteria Bacteria 1MU7T@1224,2VHFJ@28216,COG0823@1,COG0823@2,COG2931@1,COG2931@2 NA|NA|NA Q PFAM Hemolysin-type calcium-binding MAG.C3.5_01718 1101195.Meth11DRAFT_0048 1.7e-185 656.0 Nitrosomonadales dsbD GO:0003674,GO:0003756,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008152,GO:0009266,GO:0009628,GO:0009898,GO:0009987,GO:0015035,GO:0015036,GO:0016020,GO:0016021,GO:0016043,GO:0016491,GO:0016667,GO:0016853,GO:0016860,GO:0016864,GO:0017004,GO:0019725,GO:0022607,GO:0031224,GO:0031226,GO:0034622,GO:0042221,GO:0042493,GO:0042592,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0055114,GO:0065003,GO:0065007,GO:0065008,GO:0071502,GO:0071840,GO:0071944,GO:0098552,GO:0098562,GO:0140096 1.8.1.8 ko:K04084 ko00000,ko01000,ko03110 5.A.1.1 iECSE_1348.ECSE_4435 Bacteria 1MU8W@1224,2KKIB@206350,2VI8I@28216,COG4232@1,COG4232@2 NA|NA|NA CO Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps MAG.C3.5_01719 1236959.BAMT01000006_gene375 9.1e-39 166.0 Nitrosomonadales dapF GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00527 R02735 RC00302 ko00000,ko00001,ko00002,ko01000 iECED1_1282.ECED1_4494 Bacteria 1MWDH@1224,2KM39@206350,2VI0C@28216,COG0253@1,COG0253@2 NA|NA|NA E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan MAG.C3.5_01720 265072.Mfla_0197 3.7e-77 294.7 Nitrosomonadales yigA ko:K09921 ko00000 Bacteria 1R4BP@1224,2KMSU@206350,2VPN6@28216,COG3159@1,COG3159@2 NA|NA|NA S Protein of unknown function, DUF484 MAG.C3.5_01721 1101195.Meth11DRAFT_0228 1.5e-110 406.0 Nitrosomonadales xerC GO:0000150,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008907,GO:0009009,GO:0009037,GO:0009987,GO:0015074,GO:0032991,GO:0034641,GO:0042150,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0071139,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 ko:K03733 ko00000,ko03036 Bacteria 1MUJJ@1224,2KKM7@206350,2VJ5V@28216,COG4973@1,COG4973@2 NA|NA|NA L Belongs to the 'phage' integrase family. XerC subfamily MAG.C3.5_01722 1132855.KB913035_gene370 1.7e-102 378.6 Nitrosomonadales sodB GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004784,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0043167,GO:0043169,GO:0044237,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071450,GO:0071451,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748 1.15.1.1,3.1.11.6 ko:K03601,ko:K04564 ko03430,ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map03430,map04013,map04068,map04146,map04211,map04212,map04213,map05016 ko00000,ko00001,ko01000,ko03400 iAF1260.b1656,iAPECO1_1312.APECO1_736,iB21_1397.B21_01616,iBWG_1329.BWG_1471,iE2348C_1286.E2348C_1742,iEC042_1314.EC042_1825,iEC55989_1330.EC55989_1824,iECABU_c1320.ECABU_c19090,iECBD_1354.ECBD_1987,iECB_1328.ECB_01626,iECDH10B_1368.ECDH10B_1790,iECDH1ME8569_1439.ECDH1ME8569_1601,iECD_1391.ECD_01626,iECED1_1282.ECED1_1855,iECH74115_1262.ECH74115_2368,iECIAI1_1343.ECIAI1_1708,iECO103_1326.ECO103_1797,iECO111_1330.ECO111_2126,iECO26_1355.ECO26_2385,iECOK1_1307.ECOK1_1775,iECP_1309.ECP_1601,iECS88_1305.ECS88_1705,iECSE_1348.ECSE_1780,iECSP_1301.ECSP_2222,iECUMN_1333.ECUMN_1946,iECW_1372.ECW_m1823,iECs_1301.ECs2365,iEKO11_1354.EKO11_2118,iETEC_1333.ETEC_1691,iEcDH1_1363.EcDH1_1984,iEcE24377_1341.EcE24377A_1869,iEcHS_1320.EcHS_A1735,iEcSMS35_1347.EcSMS35_1542,iEcolC_1368.EcolC_1973,iG2583_1286.G2583_2051,iJO1366.b1656,iJR904.b1656,iLF82_1304.LF82_2148,iNRG857_1313.NRG857_08300,iSBO_1134.SBO_1475,iSDY_1059.SDY_1882,iSFV_1184.SFV_1678,iSF_1195.SF1684,iSFxv_1172.SFxv_1892,iSSON_1240.SSON_1500,iS_1188.S1816,iSbBS512_1146.SbBS512_E1853,iUMN146_1321.UM146_08870,iUMNK88_1353.UMNK88_2117,iUTI89_1310.UTI89_C1847,iWFL_1372.ECW_m1823,iY75_1357.Y75_RS08680,iZ_1308.Z2678,ic_1306.c2050 Bacteria 1MVW2@1224,2KMIN@206350,2VI2Y@28216,COG0605@1,COG0605@2 NA|NA|NA P Destroys radicals which are normally produced within the cells and which are toxic to biological systems MAG.C3.5_01724 582744.Msip34_0169 1.2e-264 919.1 Nitrosomonadales irp ko:K02014 ko00000,ko02000 1.B.14 Bacteria 1QTS8@1224,2KM9M@206350,2WGGE@28216,COG1629@1,COG4771@2 NA|NA|NA P TonB dependent receptor MAG.C3.5_01725 159087.Daro_1865 1.5e-16 92.0 Betaproteobacteria Bacteria 1NFHG@1224,2EC8Y@1,2VWKX@28216,3367B@2 NA|NA|NA MAG.C3.5_01726 1538295.JY96_21090 2.6e-36 158.3 unclassified Burkholderiales gstF 2.5.1.18 ko:K00799,ko:K04750 ko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418 R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905 RC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944 ko00000,ko00001,ko01000,ko02000 1.A.12.2.2,1.A.12.3.2 Bacteria 1KNSY@119065,1MZ7K@1224,2VTMF@28216,COG3832@1,COG3832@2 NA|NA|NA S Activator of Hsp90 ATPase homolog 1-like protein MAG.C3.5_01728 666681.M301_2684 3.5e-118 431.8 Nitrosomonadales nnrS ko:K07234 ko00000 Bacteria 1MUJK@1224,2KNIV@206350,2VJ75@28216,COG3213@1,COG3213@2 NA|NA|NA P NnrS protein MAG.C3.5_01729 314278.NB231_04705 1.1e-172 613.6 Chromatiales Bacteria 1MU2C@1224,1RM8A@1236,1WW1B@135613,COG5001@1,COG5001@2 NA|NA|NA T Diguanylate cyclase MAG.C3.5_01730 857087.Metme_3902 1.8e-45 188.7 Methylococcales ko:K02485 ko00000,ko02022 Bacteria 1QUN7@1224,1T3Z8@1236,1XGIJ@135618,COG0784@1,COG0784@2 NA|NA|NA T SMART Signal transduction response regulator, receiver region MAG.C3.5_01731 323261.Noc_1756 1.6e-104 386.3 Chromatiales Bacteria 1R5EN@1224,1T3Z7@1236,1X2QD@135613,COG4251@1,COG4251@2,COG5002@1,COG5002@2 NA|NA|NA T His Kinase A (phosphoacceptor) domain MAG.C3.5_01732 583345.Mmol_1132 6.2e-32 143.3 Nitrosomonadales 3.6.1.1 ko:K01507 ko00190,map00190 ko00000,ko00001,ko01000 Bacteria 1QGX4@1224,2KP3X@206350,2VR92@28216,COG0647@1,COG0647@2 NA|NA|NA G Haloacid dehalogenase-like hydrolase MAG.C3.5_01733 582744.Msip34_2581 1.3e-96 359.8 Nitrosomonadales tonB3 ko:K03832 ko00000,ko02000 2.C.1.1 Bacteria 1MUMT@1224,2KMED@206350,2VKSW@28216,COG0810@1,COG0810@2 NA|NA|NA M TIGRFAM TonB family MAG.C3.5_01734 582744.Msip34_2580 1.2e-41 175.6 Nitrosomonadales fdx Bacteria 1MZR4@1224,2KMYE@206350,2VTY1@28216,COG3411@1,COG3411@2 NA|NA|NA C Ferredoxin MAG.C3.5_01735 582744.Msip34_2579 4e-53 214.2 Nitrosomonadales hit Bacteria 1MZVD@1224,2KMRM@206350,2VU7S@28216,COG0537@1,COG0537@2 NA|NA|NA FG PFAM histidine triad (HIT) protein MAG.C3.5_01736 1101195.Meth11DRAFT_2577 2.3e-20 104.4 Nitrosomonadales Bacteria 1PBBE@1224,28Y2W@1,2KNYJ@206350,2W609@28216,2ZJYF@2 NA|NA|NA MAG.C3.5_01737 583345.Mmol_0789 5.1e-190 671.0 Nitrosomonadales 2.7.7.65 ko:K13590 ko04112,map04112 ko00000,ko00001,ko01000 Bacteria 1MXAW@1224,2KKRX@206350,2VK79@28216,COG2199@1,COG3706@2 NA|NA|NA T PFAM GGDEF domain containing protein MAG.C3.5_01738 666681.M301_1566 1.2e-78 299.7 Nitrosomonadales rpiA GO:0003674,GO:0003824,GO:0004751,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006014,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009117,GO:0009987,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564 2.7.1.12,2.7.1.15,5.3.1.6 ko:K00851,ko:K00852,ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167,M00580 R01051,R01056,R01737,R02750 RC00002,RC00017,RC00434 ko00000,ko00001,ko00002,ko01000 iJN678.rpiA Bacteria 1MVGR@1224,2KM2E@206350,2W26Q@28216,COG0120@1,COG0120@2 NA|NA|NA G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate MAG.C3.5_01739 697282.Mettu_3538 1.4e-26 125.2 Methylococcales entS Bacteria 1QTX0@1224,1T1Q8@1236,1XEWU@135618,COG0477@1,COG2814@2 NA|NA|NA EGP Transmembrane secretion effector MAG.C3.5_01741 265072.Mfla_0769 4.2e-104 384.4 Nitrosomonadales hldE GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0019200,GO:0044237,GO:0044238,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0046835,GO:0071704 2.7.1.167,2.7.7.70 ko:K03272,ko:K21344 ko00540,ko01100,map00540,map01100 M00064 R05644,R05646 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko01005 Bacteria 1MV3Z@1224,2KKBG@206350,2VHNS@28216,COG0615@1,COG0615@2,COG2870@1,COG2870@2 NA|NA|NA H Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose MAG.C3.5_01742 582744.Msip34_0993 3.1e-15 87.8 Nitrosomonadales Bacteria 1QC1F@1224,2APM8@1,2KN6A@206350,2W80E@28216,31EQK@2 NA|NA|NA MAG.C3.5_01743 1538295.JY96_10645 2.9e-194 685.6 unclassified Burkholderiales yegE GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.7.65 ko:K21084 ko02026,map02026 ko00000,ko00001,ko01000 Bacteria 1KKRI@119065,1MU2C@1224,2VJMN@28216,COG5001@1,COG5001@2 NA|NA|NA T Putative diguanylate phosphodiesterase MAG.C3.5_01744 666681.M301_0683 4.7e-228 797.0 Nitrosomonadales purB GO:0003674,GO:0003824,GO:0004018,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 4.3.2.2 ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048,M00049 R01083,R04559 RC00379,RC00444,RC00445 ko00000,ko00001,ko00002,ko01000 iAF1260.b1131,iBWG_1329.BWG_0979,iE2348C_1286.E2348C_1272,iEC042_1314.EC042_1202,iECABU_c1320.ECABU_c13450,iECDH10B_1368.ECDH10B_1203,iECP_1309.ECP_1126,iECUMN_1333.ECUMN_1375,iETEC_1333.ETEC_1255,iEcHS_1320.EcHS_A1251,iEcolC_1368.EcolC_2472,iJO1366.b1131,iJR904.b1131,iLF82_1304.LF82_1774,iNRG857_1313.NRG857_05460,iY75_1357.Y75_RS05905,ic_1306.c1510 Bacteria 1MV4B@1224,2KKN0@206350,2VI2T@28216,COG0015@1,COG0015@2 NA|NA|NA F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily MAG.C3.5_01745 1165096.ARWF01000001_gene2357 3.7e-77 295.0 Nitrosomonadales MA20_15040 Bacteria 1MX5C@1224,2KMPC@206350,2VJXE@28216,COG1432@1,COG1432@2 NA|NA|NA S OST-HTH/LOTUS domain MAG.C3.5_01746 1132855.KB913035_gene2064 3.9e-94 350.9 Nitrosomonadales wrbA 1.6.5.2 ko:K03809 ko00130,ko01110,map00130,map01110 R02964,R03643,R03816 RC00819 ko00000,ko00001,ko01000 Bacteria 1MW7N@1224,2KM4I@206350,2VJMC@28216,COG0655@1,COG0655@2 NA|NA|NA S Belongs to the WrbA family MAG.C3.5_01747 666681.M301_0679 8e-86 323.6 Nitrosomonadales ko:K07226 ko00000 Bacteria 1RFVC@1224,2KKEX@206350,2VS07@28216,COG0748@1,COG0748@2 NA|NA|NA P PFAM Pyridoxamine 5'-phosphate MAG.C3.5_01748 1165096.ARWF01000001_gene2355 5e-41 173.7 Nitrosomonadales Bacteria 1N1EF@1224,2KN33@206350,2VU3C@28216,COG3308@1,COG3308@2 NA|NA|NA S Predicted membrane protein (DUF2069) MAG.C3.5_01749 582744.Msip34_0987 2.1e-113 415.2 Nitrosomonadales surE GO:0003674,GO:0003824,GO:0004309,GO:0005488,GO:0005515,GO:0006139,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008254,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009129,GO:0009131,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009173,GO:0009175,GO:0009218,GO:0009222,GO:0009259,GO:0009261,GO:0009987,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0030145,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042578,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046049,GO:0046050,GO:0046131,GO:0046133,GO:0046135,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.1.3.5 ko:K03787 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346 RC00017 ko00000,ko00001,ko01000 iSFxv_1172.SFxv_3035 Bacteria 1MVHE@1224,2KKQA@206350,2VIND@28216,COG0496@1,COG0496@2 NA|NA|NA S Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates MAG.C3.5_01750 582744.Msip34_0986 5.4e-103 380.6 Nitrosomonadales pcm GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0030091,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 ko:K00573 ko00000,ko01000 Bacteria 1MXQC@1224,2KM5D@206350,2VQ3B@28216,COG2518@1,COG2518@2 NA|NA|NA O Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins MAG.C3.5_01751 582744.Msip34_0985 5.9e-87 327.8 Nitrosomonadales nlpD GO:0000920,GO:0001896,GO:0005575,GO:0005623,GO:0008150,GO:0008219,GO:0009279,GO:0009987,GO:0012501,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0043085,GO:0044093,GO:0044462,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071944 ko:K06194,ko:K12943 ko00000 1.A.34.1.2 Bacteria 1RD24@1224,2KKPX@206350,2VINR@28216,COG1388@1,COG1388@2,COG4942@1,COG4942@2 NA|NA|NA DM Lysin motif MAG.C3.5_01752 582744.Msip34_0984 9.1e-21 106.3 Nitrosomonadales Bacteria 1PJJB@1224,2BUM0@1,2KN9X@206350,2W814@28216,32PXK@2 NA|NA|NA MAG.C3.5_01753 1236959.BAMT01000003_gene491 1.4e-11 79.3 Nitrosomonadales Bacteria 1MU7T@1224,2KP8N@206350,2WF3H@28216,COG2931@1,COG2931@2 NA|NA|NA Q Haemolysin-type calcium-binding repeat (2 copies) MAG.C3.5_01754 1502770.JQMG01000001_gene2392 1.1e-92 347.1 Nitrosomonadales Bacteria 1MXIP@1224,2KPAB@206350,2VHH4@28216,COG3210@1,COG3210@2 NA|NA|NA U COG3210 Large exoproteins involved in heme utilization or adhesion MAG.C3.5_01757 243365.CV_3465 4.7e-76 290.4 Neisseriales guaA GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0034404,GO:0034641,GO:0034654,GO:0040007,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 M00050 R01230,R01231,R08244 RC00010,RC00204 ko00000,ko00001,ko00002,ko01000,ko01002 iJN746.PP_1032,iLJ478.TM1820,iSF_1195.SF2553,iSFxv_1172.SFxv_2808,iS_1188.S2725,iYL1228.KPN_02833 Bacteria 1MU2A@1224,2KPJ8@206351,2VHNG@28216,COG0518@1,COG0518@2,COG0519@1,COG0519@2 NA|NA|NA F Catalyzes the synthesis of GMP from XMP MAG.C3.5_01758 1101195.Meth11DRAFT_0913 3.9e-173 614.4 Betaproteobacteria Bacteria 1PUZK@1224,2VKEF@28216,COG1055@1,COG1055@2 NA|NA|NA P Involved in arsenical resistance. Thought to form the channel of an arsenite pump MAG.C3.5_01759 582744.Msip34_1225 7.3e-62 243.4 Nitrosomonadales greB Bacteria 1RHU5@1224,2KMUI@206350,2W3NT@28216,COG0782@1,COG0782@2 NA|NA|NA K PFAM transcription elongation factor GreA GreB MAG.C3.5_01760 582744.Msip34_1224 5e-89 334.0 Nitrosomonadales ydgI ko:K15976 ko00000,ko01000 Bacteria 1RBZQ@1224,2KP6W@206350,2VQTZ@28216,COG0778@1,COG0778@2 NA|NA|NA C Nitroreductase family MAG.C3.5_01761 582744.Msip34_1223 9.8e-294 1015.4 Nitrosomonadales ybiT GO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0050896 ko:K06158 ko00000,ko03012 Bacteria 1MU37@1224,2KMA8@206350,2VHGH@28216,COG0488@1,COG0488@2 NA|NA|NA S PFAM ABC transporter MAG.C3.5_01762 666681.M301_1920 2e-112 412.1 Nitrosomonadales Bacteria 1QG36@1224,2KN1Y@206350,2VK7Z@28216,COG0731@1,COG0731@2 NA|NA|NA C Radical SAM MAG.C3.5_01763 666681.M301_1919 5.1e-146 524.2 Nitrosomonadales Bacteria 1MU6I@1224,2KM0M@206350,2VIPS@28216,COG0654@1,COG0654@2 NA|NA|NA CH TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 family MAG.C3.5_01765 582744.Msip34_1196 1.1e-182 646.4 Nitrosomonadales mltF GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009279,GO:0016020,GO:0016740,GO:0016757,GO:0019867,GO:0030203,GO:0030312,GO:0030313,GO:0031975,GO:0043170,GO:0044462,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 ko:K18691 ko00000,ko01000,ko01011 iBWG_1329.BWG_2322,iEC042_1314.EC042_2762,iECDH1ME8569_1439.ECDH1ME8569_2485,iECNA114_1301.ECNA114_2631,iECP_1309.ECP_2560,iECSF_1327.ECSF_2397,iECW_1372.ECW_m2786,iEKO11_1354.EKO11_1175,iEcDH1_1363.EcDH1_1110,iEcHS_1320.EcHS_A2711,iEcolC_1368.EcolC_1119,iG2583_1286.G2583_3089,iJO1366.b2558,iSFxv_1172.SFxv_2861,iUMN146_1321.UM146_03930,iUMNK88_1353.UMNK88_3212,iUTI89_1310.UTI89_C2878,iWFL_1372.ECW_m2786,iY75_1357.Y75_RS13345 Bacteria 1MWDS@1224,2KKCY@206350,2VKSN@28216,COG4623@1,COG4623@2 NA|NA|NA M Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella MAG.C3.5_01766 1101195.Meth11DRAFT_1611 2.4e-210 738.0 Nitrosomonadales serS GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004828,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006434,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0010467,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.1.1.11 ko:K01875 ko00970,map00970 M00359,M00360 R03662,R08218 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iAF987.Gmet_3528,iSDY_1059.SDY_2368 Bacteria 1MUJF@1224,2KKNN@206350,2VHJJ@28216,COG0172@1,COG0172@2 NA|NA|NA J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) MAG.C3.5_01767 1502770.JQMG01000001_gene2301 8.2e-147 526.6 Nitrosomonadales rarA GO:0005575,GO:0005622,GO:0005623,GO:0005657,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0030894,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901576 ko:K07478 ko00000 Bacteria 1MUVS@1224,2KM8R@206350,2VHN9@28216,COG2256@1,COG2256@2 NA|NA|NA L PFAM AAA ATPase central domain protein MAG.C3.5_01768 582744.Msip34_0357 2.8e-244 851.3 Nitrosomonadales msbA ko:K06147,ko:K11085 ko02010,map02010 ko00000,ko00001,ko01000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 1MUBM@1224,2KKNE@206350,2VHAN@28216,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter transmembrane region MAG.C3.5_01769 1101195.Meth11DRAFT_0032 2.4e-32 146.0 Nitrosomonadales Bacteria 1PJHV@1224,2A8KC@1,2KN4P@206350,2W805@28216,30XNQ@2 NA|NA|NA MAG.C3.5_01770 666681.M301_2682 7.9e-68 263.5 Betaproteobacteria nasT ko:K07183,ko:K22010 M00839 ko00000,ko00002,ko02022 Bacteria 1MXDV@1224,2VSMR@28216,COG3707@1,COG3707@2 NA|NA|NA K response regulator MAG.C3.5_01772 582744.Msip34_1074 3.6e-51 207.6 Nitrosomonadales Bacteria 1RI37@1224,2BZ0G@1,2KMWR@206350,2VT46@28216,32R44@2 NA|NA|NA MAG.C3.5_01773 264198.Reut_B5335 9.3e-57 227.3 Burkholderiaceae brkB ko:K07058 ko00000 Bacteria 1KH2N@119060,1R9UY@1224,2VJYA@28216,COG1295@1,COG1295@2 NA|NA|NA S ribonuclease BN MAG.C3.5_01774 582744.Msip34_1072 5.6e-123 447.2 Nitrosomonadales pcm 2.1.1.77 ko:K00573 ko00000,ko01000 Bacteria 1NMMQ@1224,2KM1V@206350,2VH3B@28216,COG2518@1,COG2518@2 NA|NA|NA O Methyltransferase domain MAG.C3.5_01775 582744.Msip34_1067 2.1e-139 501.9 Nitrosomonadales ylqF GO:0003674,GO:0003824,GO:0003924,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022613,GO:0042254,GO:0044085,GO:0071840 ko:K14540 ko00000,ko03009 Bacteria 1MV5H@1224,2KKWC@206350,2VHAG@28216,COG1161@1,COG1161@2 NA|NA|NA S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity MAG.C3.5_01776 1165096.ARWF01000001_gene16 1.1e-70 273.9 Betaproteobacteria Bacteria 1RD0X@1224,2VS0D@28216,COG2114@1,COG2114@2 NA|NA|NA T Adenylate and Guanylate cyclase catalytic domain MAG.C3.5_01777 582744.Msip34_1066 2.7e-99 369.0 Nitrosomonadales Bacteria 1RJ6K@1224,2KMHP@206350,2VTPG@28216,COG2199@1,COG2199@2,COG5278@1,COG5278@2 NA|NA|NA T TIGRFAM diguanylate cyclase MAG.C3.5_01778 204773.HEAR0718 6.3e-72 277.7 Oxalobacteraceae Bacteria 1QV5U@1224,2WAER@28216,472QW@75682,COG0463@1,COG0463@2 NA|NA|NA M Glycosyl transferase family 2 MAG.C3.5_01779 748247.AZKH_0942 3e-108 399.1 Betaproteobacteria Bacteria 1R6ES@1224,2VNAA@28216,COG3307@1,COG3307@2 NA|NA|NA M Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology MAG.C3.5_01780 748247.AZKH_0944 4.8e-62 244.2 Betaproteobacteria 2.3.1.30,6.2.1.41 ko:K00640,ko:K18687 ko00270,ko00920,ko00984,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map00984,map01100,map01110,map01120,map01200,map01230,map05111 M00021 R00586,R10769 RC00004,RC00014,RC00041 ko00000,ko00001,ko00002,ko01000 Bacteria 1RC2G@1224,2WENR@28216,COG1045@1,COG1045@2 NA|NA|NA E Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology MAG.C3.5_01781 697282.Mettu_4229 2e-161 575.5 Methylococcales epsN ko:K16703 ko00000,ko01000,ko01003 GT4 Bacteria 1MVKK@1224,1RQ8J@1236,1XFN6@135618,COG0438@1,COG0438@2 NA|NA|NA M Glycosyl transferase, group 1 MAG.C3.5_01782 582744.Msip34_1823 1.7e-101 376.3 Nitrosomonadales epsO Bacteria 1PU38@1224,2KKGU@206350,2VKWD@28216,COG1215@1,COG1215@2 NA|NA|NA M PFAM Glycosyl transferase family 2 MAG.C3.5_01783 381666.H16_B0018 8.1e-34 151.4 Burkholderiaceae Bacteria 1K2X3@119060,1RICE@1224,2VV24@28216,COG1835@1,COG1835@2 NA|NA|NA I Acyltransferase MAG.C3.5_01784 697282.Mettu_4227 6.7e-107 394.0 Gammaproteobacteria Bacteria 1P3TJ@1224,1RZ5U@1236,COG1835@1,COG1835@2 NA|NA|NA I Acyltransferase family MAG.C3.5_01785 697282.Mettu_4226 5.3e-128 464.2 Gammaproteobacteria Bacteria 1N7B9@1224,1SR8Z@1236,2DKW5@1,30J7Z@2 NA|NA|NA MAG.C3.5_01786 1005048.CFU_2727 6.7e-70 270.8 Oxalobacteraceae gumM 2.4.1.187,2.4.1.252 ko:K05946,ko:K13657,ko:K13660 ko05111,map05111 R09733 RC00005,RC00049 ko00000,ko00001,ko01000,ko01003 GT26,GT4 Bacteria 1N1HD@1224,2VS17@28216,478U9@75682,COG1922@1,COG1922@2 NA|NA|NA M Glycosyl transferase WecB/TagA/CpsF family MAG.C3.5_01787 582744.Msip34_1820 6.3e-145 520.4 Nitrosomonadales galE 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUHI@1224,2KKP7@206350,2VIN9@28216,COG1087@1,COG1087@2 NA|NA|NA M Belongs to the NAD(P)-dependent epimerase dehydratase family MAG.C3.5_01788 666681.M301_2246 8.6e-130 469.9 Nitrosomonadales galU 2.7.7.9 ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 M00129,M00361,M00362,M00549 R00289 RC00002 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV5F@1224,2KM2M@206350,2VH00@28216,COG1210@1,COG1210@2 NA|NA|NA M PFAM Nucleotidyl transferase MAG.C3.5_01789 583345.Mmol_1798 1.9e-77 296.6 Nitrosomonadales Bacteria 1RE1P@1224,2KMMN@206350,2VR77@28216,COG5338@1,COG5338@2 NA|NA|NA S TIGRFAM exopolysaccharide biosynthesis operon protein EpsL MAG.C3.5_01790 1132855.KB913035_gene1379 2.4e-218 765.0 Nitrosomonadales sulP GO:0003333,GO:0003674,GO:0005215,GO:0005310,GO:0005326,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006836,GO:0006855,GO:0006865,GO:0008150,GO:0008272,GO:0008509,GO:0008514,GO:0015075,GO:0015103,GO:0015116,GO:0015138,GO:0015141,GO:0015171,GO:0015172,GO:0015179,GO:0015183,GO:0015238,GO:0015318,GO:0015556,GO:0015698,GO:0015711,GO:0015740,GO:0015741,GO:0015744,GO:0015800,GO:0015807,GO:0015810,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0070778,GO:0071422,GO:0071702,GO:0071705,GO:0071944,GO:0072348,GO:0098656,GO:0098660,GO:0098661,GO:1901682,GO:1902358,GO:1902475,GO:1903825,GO:1905039 ko:K03321 ko00000,ko02000 2.A.53.3 iSbBS512_1146.SbBS512_E1370 Bacteria 1MVWV@1224,2KM4W@206350,2VH45@28216,COG0659@1,COG0659@2 NA|NA|NA P STAS domain MAG.C3.5_01791 1223521.BBJX01000001_gene1014 4.1e-56 224.6 Comamonadaceae pyrR GO:0003674,GO:0003700,GO:0006139,GO:0006220,GO:0006221,GO:0006355,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0031323,GO:0031326,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0055086,GO:0060255,GO:0065007,GO:0071704,GO:0072527,GO:0072528,GO:0080090,GO:0090407,GO:0140110,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141 2.4.2.9 ko:K02825 ko00240,ko01100,map00240,map01100 R00966 RC00063 ko00000,ko00001,ko01000,ko03000 Bacteria 1RE75@1224,2VRMZ@28216,4AHJ8@80864,COG2065@1,COG2065@2 NA|NA|NA F Phosphoribosyl transferase domain MAG.C3.5_01793 1131553.JIBI01000043_gene1927 9.8e-12 76.6 Nitrosomonadales Bacteria 1Q88K@1224,295E6@1,2WBMJ@28216,2ZSRZ@2,373EF@32003 NA|NA|NA MAG.C3.5_01795 582744.Msip34_0822 7.8e-262 909.4 Nitrosomonadales pgm 5.4.2.2 ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 M00549 R00959,R01057,R08639 RC00408 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU5S@1224,2KKHB@206350,2VKCX@28216,COG0033@1,COG0033@2 NA|NA|NA G phosphoglucomutase phosphomannomutase alpha beta alpha domain I MAG.C3.5_01796 666681.M301_2401 4.6e-53 214.2 Nitrosomonadales Bacteria 1Q9CW@1224,2DZ0Y@1,2KMZJ@206350,2W7ZM@28216,34C2I@2 NA|NA|NA S EF-hand, calcium binding motif MAG.C3.5_01798 582744.Msip34_1426 1.9e-62 245.7 Nitrosomonadales 3.1.3.18 ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 R01334 RC00017 ko00000,ko00001,ko01000 Bacteria 1REXF@1224,2KNCS@206350,2VS3D@28216,COG0546@1,COG0546@2 NA|NA|NA S haloacid dehalogenase-like hydrolase MAG.C3.5_01799 312153.Pnuc_1825 1.1e-70 275.0 Burkholderiaceae Bacteria 1KGHM@119060,1MUZK@1224,2VHVG@28216,COG0457@1,COG0457@2,COG0859@1,COG0859@2 NA|NA|NA M repeat-containing protein MAG.C3.5_01800 582744.Msip34_1427 1.5e-229 802.0 Nitrosomonadales radA GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 ko:K04485 ko00000,ko03400 Bacteria 1MUJQ@1224,2KKFH@206350,2VH93@28216,COG1066@1,COG1066@2 NA|NA|NA L DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function MAG.C3.5_01801 582744.Msip34_1428 1e-129 469.9 Nitrosomonadales alr GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0006022,GO:0006023,GO:0006024,GO:0006082,GO:0006520,GO:0006522,GO:0006523,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0008784,GO:0009058,GO:0009059,GO:0009078,GO:0009079,GO:0009252,GO:0009273,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0019842,GO:0030170,GO:0030203,GO:0030632,GO:0034645,GO:0036094,GO:0036361,GO:0040007,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044281,GO:0044283,GO:0046144,GO:0046145,GO:0046394,GO:0046416,GO:0046436,GO:0046437,GO:0047661,GO:0048037,GO:0050662,GO:0070279,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0097159,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.1 ko:K01775 ko00473,ko01100,ko01502,map00473,map01100,map01502 R00401 RC00285 ko00000,ko00001,ko01000,ko01011 iEC55989_1330.EC55989_1285,iECIAI39_1322.ECIAI39_1880,iECO103_1326.ECO103_1292,iECO26_1355.ECO26_1703,iECSE_1348.ECSE_1238,iECUMN_1333.ECUMN_1479,iECW_1372.ECW_m1275,iEKO11_1354.EKO11_2666,iEcE24377_1341.EcE24377A_1335,iWFL_1372.ECW_m1275,iYL1228.KPN_02308 Bacteria 1MV0Q@1224,2KKE4@206350,2VIXM@28216,COG0787@1,COG0787@2 NA|NA|NA M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids MAG.C3.5_01802 582744.Msip34_1429 5.8e-234 816.6 Nitrosomonadales dnaB GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Bacteria 1MUG9@1224,2KKWN@206350,2VIKN@28216,COG0305@1,COG0305@2 NA|NA|NA L it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins MAG.C3.5_01803 265072.Mfla_1329 4.1e-64 250.8 Nitrosomonadales rplI GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02939 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1RD0R@1224,2KMMX@206350,2VR40@28216,COG0359@1,COG0359@2 NA|NA|NA J binds to the 23S rRNA MAG.C3.5_01804 265072.Mfla_1328 1.1e-33 148.7 Nitrosomonadales rpsR GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02963 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1MZ8U@1224,2KN2Q@206350,2VTWT@28216,COG0238@1,COG0238@2 NA|NA|NA J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit MAG.C3.5_01805 582744.Msip34_1433 1.8e-28 131.7 Nitrosomonadales priB GO:0000228,GO:0000428,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005657,GO:0005658,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006270,GO:0006276,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0016070,GO:0018130,GO:0019438,GO:0030880,GO:0030894,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0043596,GO:0043601,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0046483,GO:0050896,GO:0055029,GO:0061695,GO:0070013,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990077,GO:1990099,GO:1990234,GO:1990837 ko:K02686 ko03440,map03440 ko00000,ko00001,ko03400 Bacteria 1N98W@1224,2KN9V@206350,2VVZ4@28216,COG2965@1,COG2965@2 NA|NA|NA L Binds single-stranded DNA at the primosome assembly site (PAS) MAG.C3.5_01806 582744.Msip34_1434 2e-59 235.0 Nitrosomonadales rpsF GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 4.3.1.19 ko:K01754,ko:K02990 ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,ko03010,map00260,map00290,map01100,map01110,map01130,map01200,map01230,map03010 M00178,M00570 R00220,R00996 RC00418,RC02600 br01610,ko00000,ko00001,ko00002,ko01000,ko03011,ko03029 Bacteria 1RH82@1224,2KMRN@206350,2VR79@28216,COG0360@1,COG0360@2 NA|NA|NA J Binds together with S18 to 16S ribosomal RNA MAG.C3.5_01807 583345.Mmol_1169 7.2e-91 340.5 Nitrosomonadales Bacteria 1R4ZN@1224,2KM18@206350,2VQ1P@28216,COG1639@1,COG1639@2 NA|NA|NA T PFAM Metal-dependent hydrolase HDOD MAG.C3.5_01808 666681.M301_1510 3.8e-34 151.0 Nitrosomonadales crcB GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 ko:K06199 ko00000,ko02000 1.A.43.1,1.A.43.2,1.A.43.3 Bacteria 1MZNH@1224,2KNAY@206350,2VUBZ@28216,COG0239@1,COG0239@2 NA|NA|NA D Important for reducing fluoride concentration in the cell, thus reducing its toxicity MAG.C3.5_01809 265072.Mfla_1472 1.9e-174 619.0 Nitrosomonadales glgA GO:0000271,GO:0003674,GO:0003824,GO:0004373,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008194,GO:0009011,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033554,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0050896,GO:0051716,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 ko:K00703 ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026 M00565 R02421 RC00005 ko00000,ko00001,ko00002,ko01000,ko01003 GT5 iSFV_1184.SFV_3438 Bacteria 1MUGM@1224,2KM1X@206350,2VH1G@28216,COG0297@1,COG0297@2 NA|NA|NA G Synthesizes alpha-1,4-glucan chains using ADP-glucose MAG.C3.5_01810 1236959.BAMT01000001_gene1543 1.1e-87 329.3 Nitrosomonadales orn GO:0000175,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004532,GO:0004536,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008297,GO:0008310,GO:0008408,GO:0008946,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0016896,GO:0019439,GO:0034611,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140097,GO:0140098,GO:1901360,GO:1901361,GO:1901575 ko:K13288 ko03008,map03008 ko00000,ko00001,ko01000,ko03009,ko03019 Bacteria 1R9WX@1224,2KKU2@206350,2VIA2@28216,COG1949@1,COG1949@2 NA|NA|NA L 3'-to-5' exoribonuclease specific for small oligoribonucleotides MAG.C3.5_01811 1123367.C666_10530 7.8e-45 187.2 Betaproteobacteria Bacteria 1NPWH@1224,2BVI1@1,2W4HU@28216,32QWD@2 NA|NA|NA MAG.C3.5_01812 582744.Msip34_1227 3e-244 850.9 Nitrosomonadales guaB GO:0003674,GO:0003824,GO:0003938,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.1.1.205 ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 M00050 R01130,R08240 RC00143,RC02207 ko00000,ko00001,ko00002,ko01000,ko04147 iAPECO1_1312.APECO1_4018,iECABU_c1320.ECABU_c28100,iECP_1309.ECP_2510,iECSF_1327.ECSF_2349,iUTI89_1310.UTI89_C2826,ic_1306.c3027 Bacteria 1MUJM@1224,2KKNK@206350,2VH9X@28216,COG0516@1,COG0516@2,COG0517@1,COG0517@2 NA|NA|NA F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth MAG.C3.5_01813 582744.Msip34_1228 6.2e-11 74.3 Nitrosomonadales Bacteria 1RHH4@1224,2BCK1@1,2KN8W@206350,2VSPG@28216,32662@2 NA|NA|NA S Domain of unknown function (DUF4124) MAG.C3.5_01814 583345.Mmol_0961 4.9e-35 153.7 Nitrosomonadales rnfH ko:K03154,ko:K09801 ko04122,map04122 ko00000,ko00001 Bacteria 1MZCH@1224,2KN9N@206350,2VVNX@28216,COG2914@1,COG2914@2 NA|NA|NA S Belongs to the UPF0125 (RnfH) family MAG.C3.5_01815 582744.Msip34_1230 2e-55 221.9 Nitrosomonadales ratA GO:0003674,GO:0005488,GO:0006417,GO:0006446,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043023,GO:0044877,GO:0045947,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:2000112,GO:2000113 ko:K18588 ko00000 Bacteria 1RGUH@1224,2KMT8@206350,2VR4X@28216,COG2867@1,COG2867@2 NA|NA|NA I Polyketide cyclase / dehydrase and lipid transport MAG.C3.5_01816 1502770.JQMG01000001_gene2166 4.5e-71 273.9 Nitrosomonadales smpB GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0070930,GO:0071704,GO:0097159,GO:1901363,GO:1901564 ko:K03664 ko00000 Bacteria 1RDFP@1224,2KMNZ@206350,2VRG9@28216,COG0691@1,COG0691@2 NA|NA|NA O Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene MAG.C3.5_01818 1110502.TMO_0560 1.5e-08 66.6 Rhodospirillales Bacteria 1N3ZZ@1224,2JTBD@204441,2UF06@28211,COG3172@1,COG3172@2 NA|NA|NA H AAA domain MAG.C3.5_01819 582744.Msip34_0216 4.7e-97 360.5 Nitrosomonadales ahpC GO:0003674,GO:0003824,GO:0004601,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009321,GO:0009605,GO:0009636,GO:0009970,GO:0009987,GO:0009991,GO:0010033,GO:0016209,GO:0016491,GO:0016667,GO:0016671,GO:0016684,GO:0019725,GO:0030003,GO:0031667,GO:0031668,GO:0031669,GO:0032843,GO:0032991,GO:0033194,GO:0033195,GO:0033212,GO:0033214,GO:0033554,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071496,GO:0097237,GO:0098754,GO:0098771,GO:0098869,GO:1901700,GO:1902494,GO:1990204,GO:1990748 1.11.1.15 ko:K03386 ko04214,map04214 ko00000,ko00001,ko01000,ko04147 Bacteria 1MWPY@1224,2KMM9@206350,2VI7T@28216,COG0450@1,COG0450@2 NA|NA|NA O PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen MAG.C3.5_01820 582744.Msip34_0217 1.5e-251 875.2 Nitrosomonadales ahpF GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008785,GO:0009321,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071949,GO:0097159,GO:1901265,GO:1901363,GO:1902494,GO:1990204 ko:K03387 ko00000,ko01000 Bacteria 1MUKD@1224,2KM80@206350,2VJ01@28216,COG3634@1,COG3634@2 NA|NA|NA C Alkyl hydroperoxide reductase, F subunit MAG.C3.5_01821 1443111.JASG01000004_gene971 5.5e-158 564.3 Sulfitobacter nnrD GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0052855,GO:0052856,GO:0052857 4.2.1.136,5.1.99.6 ko:K17758,ko:K17759 ko00000,ko01000 Bacteria 1MU1Q@1224,2TT58@28211,3ZWG0@60136,COG0062@1,COG0062@2,COG0063@1,COG0063@2 NA|NA|NA G Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration MAG.C3.5_01822 1132855.KB913035_gene180 2e-219 768.8 Nitrosomonadales Bacteria 1MVCM@1224,2KNPX@206350,2VMSK@28216,COG1368@1,COG1368@2 NA|NA|NA M Sulfatase MAG.C3.5_01823 582744.Msip34_0500 1.4e-08 65.9 Betaproteobacteria Bacteria 1NG92@1224,2EMB8@1,2VXTV@28216,33F08@2 NA|NA|NA MAG.C3.5_01824 666681.M301_1598 3e-191 674.9 Nitrosomonadales amt ko:K03320 ko00000,ko02000 1.A.11 Bacteria 1NR9F@1224,2KNM5@206350,2VJ8B@28216,COG0004@1,COG0004@2 NA|NA|NA P Ammonium Transporter Family MAG.C3.5_01826 582744.Msip34_0689 9.2e-134 483.4 Nitrosomonadales 4.1.1.86 ko:K13745 ko00260,ko01120,map00260,map01120 R07650 RC00299 ko00000,ko00001,ko01000 Bacteria 1MWUX@1224,2KNKS@206350,2VIUF@28216,COG0076@1,COG0076@2 NA|NA|NA E Pyridoxal-dependent decarboxylase conserved domain MAG.C3.5_01827 583345.Mmol_1590 3e-81 308.5 Nitrosomonadales yeeZ 1.5.5.1 ko:K00311 ko00000,ko01000 Bacteria 1MWVJ@1224,2KMJB@206350,2VJ3T@28216,COG0451@1,COG0451@2 NA|NA|NA GM NAD dependent epimerase/dehydratase family MAG.C3.5_01828 582744.Msip34_0687 4.7e-73 280.8 Nitrosomonadales nudF 3.6.1.13 ko:K01515 ko00230,map00230 R01054 RC00002 ko00000,ko00001,ko01000 iHN637.CLJU_RS05505,iSB619.SA_RS07540,iYO844.BSU23610 Bacteria 1RCX7@1224,2KMMQ@206350,2VRU5@28216,COG0494@1,COG0494@2 NA|NA|NA L NUDIX domain MAG.C3.5_01829 582744.Msip34_0685 1.3e-31 142.1 Nitrosomonadales Bacteria 1N7ID@1224,2BW9S@1,2KN36@206350,2VVR9@28216,32Z6F@2 NA|NA|NA S Protein of unknown function (DUF2818) MAG.C3.5_01830 582744.Msip34_0684 1.4e-198 699.1 Nitrosomonadales nuoN GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 ko:K00343 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 Bacteria 1MV56@1224,2KM9N@206350,2VHWX@28216,COG1007@1,COG1007@2 NA|NA|NA C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient MAG.C3.5_01831 582744.Msip34_0683 3.3e-235 820.8 Nitrosomonadales nuoM GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 ko:K00342 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 Bacteria 1MV7V@1224,2KM01@206350,2VIAX@28216,COG1008@1,COG1008@2 NA|NA|NA C TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M MAG.C3.5_01832 582744.Msip34_0682 0.0 1107.4 Nitrosomonadales nuoL 1.6.5.3 ko:K00341 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 Bacteria 1MW2M@1224,2KKKI@206350,2VJ2J@28216,COG1009@1,COG1009@2 NA|NA|NA CP TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain L MAG.C3.5_01833 583345.Mmol_1596 5.7e-41 173.3 Nitrosomonadales nuoK GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 ko:K00340 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 Bacteria 1RH0S@1224,2KMXI@206350,2VSDV@28216,COG0713@1,COG0713@2 NA|NA|NA C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient MAG.C3.5_01834 582744.Msip34_0680 2.4e-89 335.1 Nitrosomonadales nuoJ GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 ko:K00339 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 Bacteria 1MWJV@1224,2KKQS@206350,2VJ4G@28216,COG0839@1,COG0839@2 NA|NA|NA C Belongs to the complex I subunit 6 family MAG.C3.5_01835 582744.Msip34_0679 1.7e-71 275.4 Nitrosomonadales nuoI GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3,1.6.99.3 ko:K00338,ko:K03941 ko00190,ko01100,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map04714,map04723,map04932,map05010,map05012,map05016 M00143,M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1,3.D.1.6 Bacteria 1MV90@1224,2KM6I@206350,2VIQP@28216,COG1143@1,COG1143@2 NA|NA|NA C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient MAG.C3.5_01836 582744.Msip34_0678 1e-117 429.5 Nitrosomonadales nuoH GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 ko:K00337 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 Bacteria 1MU2R@1224,2KM74@206350,2VHD0@28216,COG1005@1,COG1005@2 NA|NA|NA C NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone MAG.C3.5_01837 1031711.RSPO_c00799 3.7e-51 209.1 Betaproteobacteria Bacteria 1REWD@1224,2VR80@28216,COG1819@1,COG1819@2 NA|NA|NA CG COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase MAG.C3.5_01838 365044.Pnap_4013 1.5e-87 330.5 Comamonadaceae Bacteria 1PRBP@1224,2VHDS@28216,4A9SS@80864,COG2831@1,COG2831@2 NA|NA|NA U Haemolysin secretion/activation protein ShlB/FhaC/HecB MAG.C3.5_01839 582744.Msip34_1885 4.2e-157 560.8 Nitrosomonadales hrcA GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 ko:K03705 ko00000,ko03000 Bacteria 1MVX4@1224,2KKME@206350,2VHCK@28216,COG1420@1,COG1420@2 NA|NA|NA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons MAG.C3.5_01840 583345.Mmol_1713 6.9e-217 760.4 Betaproteobacteria yejM GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K07014 ko00000 Bacteria 1MX6X@1224,2VJH1@28216,COG3083@1,COG3083@2 NA|NA|NA S Domain of unknown function (DUF3413) MAG.C3.5_01841 582744.Msip34_1884 6.9e-108 397.1 Nitrosomonadales nadK GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 ko:K00858 ko00760,ko01100,map00760,map01100 R00104 RC00002,RC00078 ko00000,ko00001,ko01000 iEcSMS35_1347.EcSMS35_2767,iHN637.CLJU_RS05480,iLJ478.TM1733,iSB619.SA_RS04895 Bacteria 1MUBC@1224,2KM1M@206350,2VIV0@28216,COG0061@1,COG0061@2 NA|NA|NA G Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP MAG.C3.5_01842 1236959.BAMT01000001_gene1032 3.5e-201 708.0 Nitrosomonadales recN GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 ko:K03631 ko00000,ko03400 Bacteria 1MUNP@1224,2KMFA@206350,2VHHA@28216,COG0497@1,COG0497@2 NA|NA|NA L May be involved in recombinational repair of damaged DNA MAG.C3.5_01843 582744.Msip34_1882 2.5e-63 248.1 Nitrosomonadales fur ko:K03711 ko00000,ko03000 Bacteria 1RDWJ@1224,2KMNR@206350,2VR52@28216,COG0735@1,COG0735@2 NA|NA|NA P Belongs to the Fur family MAG.C3.5_01844 265072.Mfla_0776 9.3e-49 200.7 Nitrosomonadales bamE 3.4.16.4 ko:K01286,ko:K03642,ko:K06186,ko:K07258 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011,ko02000 1.B.33.1 Bacteria 1N6YW@1224,2KMV2@206350,2VRC6@28216,COG2913@1,COG2913@2,COG3087@1,COG3087@2 NA|NA|NA J Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane MAG.C3.5_01845 582744.Msip34_1880 1.6e-114 419.1 Nitrosomonadales dapB GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0042802,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.17.1.8 ko:K00215,ko:K03546 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R04198,R04199 RC00478 ko00000,ko00001,ko00002,ko01000,ko03400 iIT341.HP0510,iLJ478.TM1520,iSbBS512_1146.SbBS512_E0035 Bacteria 1MUCT@1224,2KKZJ@206350,2VJC3@28216,COG0289@1,COG0289@2 NA|NA|NA E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate MAG.C3.5_01846 1538295.JY96_10095 3.2e-51 209.1 unclassified Burkholderiales Bacteria 1KNJE@119065,1MZV7@1224,2VUP7@28216,COG2199@1,COG3706@2 NA|NA|NA T diguanylate cyclase MAG.C3.5_01847 265072.Mfla_0778 4.2e-182 644.0 Nitrosomonadales carA GO:0000050,GO:0003674,GO:0003824,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005951,GO:0006082,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006520,GO:0006525,GO:0006526,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0032991,GO:0034641,GO:0034654,GO:0040007,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046394,GO:0046483,GO:0055086,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 iAPECO1_1312.APECO1_1950,iNJ661.Rv1383,iUTI89_1310.UTI89_C0036,ic_1306.c0040 Bacteria 1MUB9@1224,2KMEN@206350,2VH9Q@28216,COG0505@1,COG0505@2 NA|NA|NA EF TIGRFAM carbamoyl-phosphate synthase, small subunit MAG.C3.5_01851 266835.14028127 8.6e-42 177.6 Alphaproteobacteria Bacteria 1NUAR@1224,2ECNY@1,2UPJ0@28211,336KQ@2 NA|NA|NA MAG.C3.5_01852 338969.Rfer_1979 1.3e-24 119.4 Comamonadaceae Bacteria 1N5T4@1224,2VK22@28216,4AC1D@80864,COG2206@1,COG2206@2 NA|NA|NA T Domain of unknown function (DUF3391) MAG.C3.5_01853 1101195.Meth11DRAFT_2409 0.0 1112.4 Nitrosomonadales 1.3.99.16 ko:K07303 ko00000,ko01000 Bacteria 1QTTJ@1224,2KKG8@206350,2VHB9@28216,COG1529@1,COG1529@2 NA|NA|NA C PFAM aldehyde oxidase and xanthine dehydrogenase molybdopterin binding MAG.C3.5_01854 1101195.Meth11DRAFT_2410 4.4e-130 471.1 Nitrosomonadales xdhC2 ko:K07402 ko00000 Bacteria 1MXKU@1224,2KM36@206350,2VHIK@28216,COG1975@1,COG1975@2 NA|NA|NA O XdhC and CoxI family MAG.C3.5_01855 1165096.ARWF01000001_gene1702 2e-47 195.7 Nitrosomonadales ygfJ 2.7.7.76 ko:K07141 ko00790,map00790 R11582 ko00000,ko00001,ko01000 Bacteria 1MW0X@1224,2KMYU@206350,2VSIN@28216,COG2068@1,COG2068@2 NA|NA|NA S MobA-like NTP transferase domain MAG.C3.5_01856 1132855.KB913035_gene1498 5.8e-202 710.3 Nitrosomonadales ko:K07576 ko00000 Bacteria 1MUDD@1224,2KKTT@206350,2VHFX@28216,COG1236@1,COG1236@2 NA|NA|NA J Beta-Casp domain MAG.C3.5_01857 666681.M301_0609 4.3e-20 103.6 Bacteria ko:K09794 ko00000 Bacteria COG2841@1,COG2841@2 NA|NA|NA S Protein of unknown function (DUF465) MAG.C3.5_01858 1387312.BAUS01000007_gene2186 1.1e-60 239.2 Nitrosomonadales Bacteria 1R2D3@1224,2KNCX@206350,2WIAP@28216,COG5485@1,COG5485@2 NA|NA|NA S SnoaL-like polyketide cyclase MAG.C3.5_01859 1026882.MAMP_00698 1.5e-27 128.6 Thiotrichales Bacteria 1MZ6N@1224,1S6R7@1236,463T9@72273,COG1733@1,COG1733@2 NA|NA|NA K HxlR-like helix-turn-helix MAG.C3.5_01860 666681.M301_1896 1.8e-62 245.4 Nitrosomonadales tadA GO:0002097,GO:0002100,GO:0003674,GO:0003824,GO:0004000,GO:0005488,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008251,GO:0008270,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0016787,GO:0016810,GO:0016814,GO:0019239,GO:0034470,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0046914,GO:0052717,GO:0071704,GO:0090304,GO:1901360 3.4.17.13,3.5.4.1,3.5.4.3,3.5.4.33,3.8.1.5 ko:K01297,ko:K01485,ko:K01487,ko:K01563,ko:K11991 ko00230,ko00240,ko00330,ko00361,ko00625,ko01100,ko01120,map00230,map00240,map00330,map00361,map00625,map01100,map01120 R00974,R01411,R01676,R02922,R05284,R05367,R05368,R05369,R05370,R07669,R07670,R10223 RC00074,RC00204,RC00477,RC00514,RC00809,RC01317,RC01340,RC01341,RC02013 ko00000,ko00001,ko01000,ko01002,ko01011,ko03016 Bacteria 1RGU0@1224,2KMTZ@206350,2VR60@28216,COG0590@1,COG0590@2 NA|NA|NA FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) MAG.C3.5_01861 265072.Mfla_1839 4e-204 718.0 Nitrosomonadales tgpA 2.3.2.13 ko:K22452 ko00000,ko01000 Bacteria 1MWCE@1224,2KKPG@206350,2VHZP@28216,COG1305@1,COG1305@2 NA|NA|NA E Domain of unknown function (DUF3488) MAG.C3.5_01862 666681.M301_1894 6e-97 360.9 Nitrosomonadales Bacteria 1R3QD@1224,2KKPC@206350,2VN9P@28216,COG1721@1,COG1721@2 NA|NA|NA S Protein of unknown function DUF58 MAG.C3.5_01863 265072.Mfla_1837 4.5e-126 457.6 Nitrosomonadales moxR ko:K03924 ko00000,ko01000 Bacteria 1MUFN@1224,2KKI1@206350,2VKJJ@28216,COG0714@1,COG0714@2 NA|NA|NA S ATPase family associated with various cellular activities (AAA) MAG.C3.5_01864 582744.Msip34_0976 2.4e-59 235.0 Betaproteobacteria Bacteria 1N7CX@1224,2WFFX@28216,COG3431@1,COG3431@2 NA|NA|NA S Phosphate-starvation-inducible E MAG.C3.5_01865 582744.Msip34_0977 3.8e-125 454.5 Nitrosomonadales allS_2 Bacteria 1MZTA@1224,2KM9B@206350,2VJTZ@28216,COG0583@1,COG0583@2 NA|NA|NA K Transcriptional regulator, LysR family MAG.C3.5_01866 265072.Mfla_1833 1.5e-89 335.9 Nitrosomonadales ko:K06911 ko00000 Bacteria 1MVSW@1224,2KM4D@206350,2VHPA@28216,COG1741@1,COG1741@2 NA|NA|NA S Belongs to the pirin family MAG.C3.5_01867 1101195.Meth11DRAFT_1717 4.2e-82 310.8 Nitrosomonadales Bacteria 1MW7N@1224,2KKSS@206350,2VRZD@28216,COG0655@1,COG0655@2 NA|NA|NA S Flavodoxin domain MAG.C3.5_01868 582744.Msip34_0980 2.3e-75 288.5 Nitrosomonadales yceI Bacteria 1R9XD@1224,2KMQ0@206350,2VYPK@28216,COG2353@1,COG2353@2 NA|NA|NA S Belongs to the UPF0312 family MAG.C3.5_01869 582744.Msip34_0981 1.7e-164 585.5 Nitrosomonadales morB ko:K10680 ko00633,ko01120,map00633,map01120 R08014,R08017,R08042 RC00250 ko00000,ko00001,ko01000 Bacteria 1MVIX@1224,2KKF6@206350,2VH2S@28216,COG1902@1,COG1902@2 NA|NA|NA C PFAM NADH flavin oxidoreductase NADH oxidase MAG.C3.5_01870 583345.Mmol_0734 4.2e-89 334.3 Nitrosomonadales tdsD Bacteria 1RA6E@1224,2KKHC@206350,2VSIM@28216,COG0778@1,COG0778@2 NA|NA|NA C Nitroreductase family MAG.C3.5_01871 1502770.JQMG01000001_gene98 1.1e-54 219.2 Nitrosomonadales 1.8.1.8 ko:K03671,ko:K03672 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko01000,ko03110 Bacteria 1QVCY@1224,2KMUK@206350,2WGQT@28216,COG0526@1,COG0526@2 NA|NA|NA CO Thioredoxin MAG.C3.5_01872 748247.AZKH_3431 3.5e-16 91.7 Rhodocyclales 6.1.1.16 ko:K01884 ko00970,map00970 M00360 R03650 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1MU7T@1224,2KW9H@206389,2VHFJ@28216,COG2931@1,COG2931@2 NA|NA|NA Q Haemolysin-type calcium-binding repeat (2 copies) MAG.C3.5_01874 582744.Msip34_2011 3.5e-153 547.7 Nitrosomonadales prs GO:0000287,GO:0003674,GO:0003824,GO:0004749,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006015,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016772,GO:0016778,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042301,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046391,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.6.1 ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 M00005 R01049 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 iAF1260.b1207,iAPECO1_1312.APECO1_323,iB21_1397.B21_01192,iBWG_1329.BWG_1032,iE2348C_1286.E2348C_1330,iEC042_1314.EC042_1264,iEC55989_1330.EC55989_1303,iECABU_c1320.ECABU_c14780,iECBD_1354.ECBD_2414,iECB_1328.ECB_01182,iECDH10B_1368.ECDH10B_1260,iECDH1ME8569_1439.ECDH1ME8569_1146,iECD_1391.ECD_01182,iECED1_1282.ECED1_1355,iECH74115_1262.ECH74115_1688,iECIAI1_1343.ECIAI1_1228,iECIAI39_1322.ECIAI39_1543,iECNA114_1301.ECNA114_1372,iECO103_1326.ECO103_1309,iECO111_1330.ECO111_1536,iECO26_1355.ECO26_1720,iECOK1_1307.ECOK1_1360,iECP_1309.ECP_1255,iECS88_1305.ECS88_1275,iECSE_1348.ECSE_1257,iECSF_1327.ECSF_1183,iECSP_1301.ECSP_1597,iECUMN_1333.ECUMN_1504,iECW_1372.ECW_m1293,iECs_1301.ECs1712,iEKO11_1354.EKO11_2647,iETEC_1333.ETEC_1311,iEcDH1_1363.EcDH1_2440,iEcE24377_1341.EcE24377A_1355,iEcHS_1320.EcHS_A1312,iEcSMS35_1347.EcSMS35_1935,iEcolC_1368.EcolC_2419,iG2583_1286.G2583_1478,iJO1366.b1207,iJR904.b1207,iLF82_1304.LF82_1744,iLJ478.TM1628,iNRG857_1313.NRG857_06180,iSBO_1134.SBO_1860,iSDY_1059.SDY_1256,iSSON_1240.SSON_1971,iUMN146_1321.UM146_11025,iUMNK88_1353.UMNK88_1523,iUTI89_1310.UTI89_C1401,iWFL_1372.ECW_m1293,iY75_1357.Y75_RS06300,ic_1306.c1665 Bacteria 1MW21@1224,2KKZQ@206350,2VHU0@28216,COG0462@1,COG0462@2 NA|NA|NA F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) MAG.C3.5_01876 265072.Mfla_0679 4.2e-92 344.7 Nitrosomonadales ispE GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006629,GO:0006720,GO:0006793,GO:0006796,GO:0008144,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0050515,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901576 2.1.1.182,2.7.1.148 ko:K00919,ko:K02528,ko:K16924 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096,M00582 R05634,R10716 RC00002,RC00003,RC01439,RC03257 ko00000,ko00001,ko00002,ko01000,ko02000,ko03009 3.A.1.29 iEC55989_1330.EC55989_1304,iLJ478.TM1383,iYO844.BSU00460 Bacteria 1MVU3@1224,2KKVP@206350,2VHK3@28216,COG1947@1,COG1947@2 NA|NA|NA I Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol MAG.C3.5_01877 582744.Msip34_2009 5.7e-48 197.6 Nitrosomonadales lolB GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006807,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009279,GO:0010876,GO:0016020,GO:0019538,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0033218,GO:0034613,GO:0042157,GO:0042277,GO:0043170,GO:0044238,GO:0044462,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051641,GO:0051668,GO:0070727,GO:0071704,GO:0071723,GO:0071944,GO:0072657,GO:1901564 ko:K02494 ko00000 Bacteria 1N02T@1224,2KN1T@206350,2VUIR@28216,COG3017@1,COG3017@2 NA|NA|NA M Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein MAG.C3.5_01878 265072.Mfla_0681 1.8e-192 679.1 Nitrosomonadales Bacteria 1MYB8@1224,2KMD8@206350,2VI6C@28216,COG0457@1,COG0457@2 NA|NA|NA S Tetratricopeptide repeat MAG.C3.5_01879 582744.Msip34_2007 2.9e-144 518.1 Nitrosomonadales 3.6.3.7 ko:K01990,ko:K09697 ko02010,ko02020,map02010,map02020 M00253,M00254 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1,3.A.1.115 Bacteria 1MUX3@1224,2KM5I@206350,2VJ2B@28216,COG1131@1,COG1131@2 NA|NA|NA V PFAM ABC transporter MAG.C3.5_01880 582744.Msip34_2006 6.8e-104 383.6 Nitrosomonadales yxlG ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1NZZ9@1224,2KP9X@206350,2VRRA@28216,COG1277@1,COG1277@2 NA|NA|NA S ABC-2 family transporter protein MAG.C3.5_01881 582744.Msip34_2005 3.5e-215 754.2 Nitrosomonadales gldG ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1MUXW@1224,2KM0A@206350,2VMDE@28216,COG3225@1,COG3225@2 NA|NA|NA N ABC-type uncharacterized transport system MAG.C3.5_01882 582744.Msip34_2004 3.5e-107 394.8 Nitrosomonadales Bacteria 1N41X@1224,2E2GR@1,2KKWG@206350,2VUN3@28216,32XKS@2 NA|NA|NA S Domain of unknown function (DUF4340) MAG.C3.5_01883 1165096.ARWF01000001_gene967 7.1e-115 420.2 Nitrosomonadales fpg GO:0000702,GO:0000703,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003824,GO:0003906,GO:0004518,GO:0004519,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008270,GO:0008534,GO:0009987,GO:0016787,GO:0016788,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363 3.2.2.23,4.2.99.18 ko:K10563 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1MVM5@1224,2KKWR@206350,2VI10@28216,COG0266@1,COG0266@2 NA|NA|NA L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates MAG.C3.5_01884 748247.AZKH_0492 9.9e-216 756.1 Rhodocyclales putP ko:K03307,ko:K14387 ko04725,ko05231,map04725,map05231 ko00000,ko00001,ko02000 2.A.21,2.A.21.8 Bacteria 1MUBI@1224,2KUVM@206389,2VHA8@28216,COG0591@1,COG0591@2 NA|NA|NA E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family MAG.C3.5_01885 265072.Mfla_0696 1.4e-223 782.3 Nitrosomonadales ubiB GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016020,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901576,GO:1901661,GO:1901663 ko:K03688 ko00000 iYL1228.KPN_04331 Bacteria 1MU1Z@1224,2KKPI@206350,2VJ07@28216,COG0661@1,COG0661@2 NA|NA|NA H Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis MAG.C3.5_01886 265072.Mfla_0697 1.1e-53 216.5 Nitrosomonadales yigP GO:0006082,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0019752,GO:0032150,GO:0042180,GO:0042181,GO:0043436,GO:0043648,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046417,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 ko:K03690 ko00000 Bacteria 1N314@1224,2KMY8@206350,2VU2B@28216,COG3165@1,COG3165@2 NA|NA|NA S SCP-2 sterol transfer family MAG.C3.5_01887 1236959.BAMT01000004_gene917 2.8e-118 431.4 Nitrosomonadales ubiE GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008425,GO:0008757,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016020,GO:0016740,GO:0016741,GO:0030580,GO:0032259,GO:0040007,GO:0042180,GO:0042181,GO:0043333,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901576,GO:1901661,GO:1901663 2.1.1.163,2.1.1.201 ko:K03183 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116,M00117 R04990,R04993,R06859,R08774,R09736 RC00003,RC01253,RC01662 ko00000,ko00001,ko00002,ko01000 iAF1260.b3833,iBWG_1329.BWG_3511,iE2348C_1286.E2348C_4147,iEC042_1314.EC042_4213,iEC55989_1330.EC55989_4310,iECDH10B_1368.ECDH10B_4024,iECDH1ME8569_1439.ECDH1ME8569_3712,iECH74115_1262.ECH74115_5274,iECIAI1_1343.ECIAI1_4028,iECIAI39_1322.ECIAI39_3162,iECO103_1326.ECO103_4330,iECO111_1330.ECO111_4661,iECO26_1355.ECO26_4752,iECSE_1348.ECSE_4121,iECSP_1301.ECSP_4888,iECUMN_1333.ECUMN_4359,iECW_1372.ECW_m4135,iECs_1301.ECs4763,iEKO11_1354.EKO11_4524,iETEC_1333.ETEC_4110,iEcDH1_1363.EcDH1_4146,iEcE24377_1341.EcE24377A_4354,iEcHS_1320.EcHS_A4057,iEcSMS35_1347.EcSMS35_4216,iEcolC_1368.EcolC_4175,iG2583_1286.G2583_4633,iJO1366.b3833,iJR904.b3833,iSBO_1134.SBO_3847,iSDY_1059.SDY_3910,iSFV_1184.SFV_3665,iSF_1195.SF3911,iSFxv_1172.SFxv_4263,iSSON_1240.SSON_4008,iS_1188.S3843,iSbBS512_1146.SbBS512_E4305,iUMNK88_1353.UMNK88_4663,iWFL_1372.ECW_m4135,iY75_1357.Y75_RS17910,iZ_1308.Z5355 Bacteria 1MX8I@1224,2KME1@206350,2VHBM@28216,COG0500@1,COG2226@2 NA|NA|NA H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) MAG.C3.5_01888 582744.Msip34_1997 2.3e-55 221.5 Nitrosomonadales Bacteria 1MZ5M@1224,2KMR5@206350,2VR9K@28216,COG3536@1,COG3536@2 NA|NA|NA S Protein of unknown function (DUF971) MAG.C3.5_01889 1165096.ARWF01000001_gene960 0.0 1088.2 Nitrosomonadales Bacteria 1MXBK@1224,2KKJN@206350,2VKA1@28216,COG0699@1,COG0699@2 NA|NA|NA S Dynamin family MAG.C3.5_01890 265072.Mfla_0701 2e-18 97.8 Nitrosomonadales ccoS Bacteria 1PJS9@1224,2KNZZ@206350,2W85G@28216,COG3197@1,COG3197@2 NA|NA|NA P Cytochrome oxidase maturation protein cbb3-type MAG.C3.5_01891 582744.Msip34_1993 1.6e-125 455.7 Nitrosomonadales rpoH ko:K03089 ko00000,ko03021 Bacteria 1MVWR@1224,2KKPY@206350,2VI91@28216,COG0568@1,COG0568@2 NA|NA|NA K RNA polymerase sigma factor, sigma-70 family MAG.C3.5_01892 582744.Msip34_1600 2.5e-207 728.0 Nitrosomonadales ydeP 1.17.1.9 ko:K00123 ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200 R00519 RC02796 ko00000,ko00001,ko01000 Bacteria 1MU6B@1224,2KKI2@206350,2VKT8@28216,COG0243@1,COG0243@2 NA|NA|NA C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family MAG.C3.5_01894 583345.Mmol_0468 3.2e-187 661.4 Nitrosomonadales yjiR Bacteria 1MV6F@1224,2KMFG@206350,2VN16@28216,COG1167@1,COG1167@2 NA|NA|NA K helix_turn_helix gluconate operon transcriptional repressor MAG.C3.5_01895 582744.Msip34_1515 1.1e-140 506.1 Nitrosomonadales cysB ko:K13634 ko00000,ko03000 Bacteria 1MU8N@1224,2KKYU@206350,2VHQY@28216,COG0583@1,COG0583@2 NA|NA|NA K LysR substrate binding domain MAG.C3.5_01896 1101195.Meth11DRAFT_1073 9.8e-106 389.8 Nitrosomonadales MA20_18170 ko:K07090 ko00000 Bacteria 1MWX2@1224,2KKR2@206350,2VMUD@28216,COG0730@1,COG0730@2 NA|NA|NA S Sulfite exporter TauE/SafE MAG.C3.5_01897 59538.XP_005974328.1 1.9e-303 1047.7 Eukaryota NIR GO:0001101,GO:0003674,GO:0003824,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0008150,GO:0008152,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0010035,GO:0010167,GO:0016020,GO:0016491,GO:0016661,GO:0016662,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0048046,GO:0050421,GO:0050896,GO:0055114,GO:0098809,GO:1901698,GO:1901700 1.7.7.1 ko:K00366 ko00910,ko01120,map00910,map01120 M00531 R00790 RC00176 ko00000,ko00001,ko00002,ko01000 Eukaryota COG0155@1,KOG0560@2759 NA|NA|NA P sulfite reductase (ferredoxin) activity MAG.C3.5_01898 1101195.Meth11DRAFT_1071 7.3e-88 330.1 Nitrosomonadales MA20_18215 1.8.4.10,1.8.4.8 ko:K00390 ko00920,ko01100,ko01120,map00920,map01100,map01120 M00176 R02021 RC00007,RC02862 ko00000,ko00001,ko00002,ko01000 Bacteria 1RJR9@1224,2KKUK@206350,2VSQB@28216,COG3749@1,COG3749@2 NA|NA|NA S Bacterial protein of unknown function (DUF934) MAG.C3.5_01899 1101195.Meth11DRAFT_1070 2.2e-118 431.8 Nitrosomonadales cysH GO:0003674,GO:0003824,GO:0004604,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016667,GO:0016671,GO:0044424,GO:0044464,GO:0055114 1.7.7.1,1.8.4.10,1.8.4.8,2.7.1.25 ko:K00366,ko:K00390,ko:K00860 ko00230,ko00910,ko00920,ko01100,ko01120,map00230,map00910,map00920,map01100,map01120 M00176,M00531 R00509,R00790,R02021,R04928 RC00002,RC00007,RC00078,RC00176,RC02862 ko00000,ko00001,ko00002,ko01000 Bacteria 1MXUR@1224,2KMCD@206350,2VIR0@28216,COG0175@1,COG0175@2 NA|NA|NA EH Reduction of activated sulfate into sulfite MAG.C3.5_01900 582744.Msip34_2159 4.7e-136 490.7 Nitrosomonadales cysW ko:K02047 ko00920,ko02010,map00920,map02010 M00185 ko00000,ko00001,ko00002,ko02000 3.A.1.6.1,3.A.1.6.3 Bacteria 1MV8X@1224,2KM7E@206350,2VI3S@28216,COG4208@1,COG4208@2 NA|NA|NA P TIGRFAM sulfate ABC transporter, inner membrane subunit CysW MAG.C3.5_01901 582744.Msip34_2158 1.9e-131 475.3 Nitrosomonadales cysT GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02018,ko:K02046 ko00920,ko02010,map00920,map02010 M00185,M00189 ko00000,ko00001,ko00002,ko02000 3.A.1.6.1,3.A.1.6.3,3.A.1.8 iJN746.PP_5170 Bacteria 1QTTU@1224,2KMAW@206350,2VHKY@28216,COG0555@1,COG0555@2 NA|NA|NA O TIGRFAM sulfate ABC transporter, inner membrane subunit CysT MAG.C3.5_01902 666681.M301_0109 1.6e-117 429.1 Nitrosomonadales Bacteria 1RM23@1224,2KKU9@206350,2VSFS@28216,COG2200@1,COG2200@2 NA|NA|NA T PFAM EAL domain MAG.C3.5_01903 582744.Msip34_2156 7e-157 560.1 Nitrosomonadales sbp ko:K02048 ko00920,ko02010,map00920,map02010 M00185 ko00000,ko00001,ko00002,ko02000 3.A.1.6.1,3.A.1.6.3 Bacteria 1MUAU@1224,2KMFK@206350,2VIQZ@28216,COG1613@1,COG1613@2 NA|NA|NA P TIGRFAM sulfate ABC transporter, periplasmic sulfate-binding protein MAG.C3.5_01904 522306.CAP2UW1_3938 4.8e-106 391.3 unclassified Betaproteobacteria chaA ko:K07300 ko00000,ko02000 2.A.19 iNJ661.Rv1607 Bacteria 1KQGX@119066,1MWD8@1224,2VJQM@28216,COG0387@1,COG0387@2 NA|NA|NA P Sodium/calcium exchanger protein MAG.C3.5_01905 265072.Mfla_0615 8.4e-126 456.8 Nitrosomonadales srpH GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.30 ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 M00021 R00586 RC00004,RC00041 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVFX@1224,2KM8X@206350,2VHZF@28216,COG1045@1,COG1045@2 NA|NA|NA E Bacterial transferase hexapeptide (six repeats) MAG.C3.5_01906 1502770.JQMG01000001_gene546 5.7e-161 573.5 Nitrosomonadales srpI 2.7.2.1 ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 M00357,M00579 R00315,R01353 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 Bacteria 1MW6M@1224,2KKR8@206350,2VHR8@28216,COG0664@1,COG0664@2 NA|NA|NA T - Catabolite gene activator and regulatory subunit of cAMP-dependent protein MAG.C3.5_01909 582744.Msip34_2750 3.7e-113 414.8 Nitrosomonadales 3.4.21.107 ko:K04771 ko01503,ko02020,map01503,map02020 M00728 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 Bacteria 1RG0B@1224,2KM6U@206350,2WBQE@28216,COG0265@1,COG0265@2,COG0457@1,COG0457@2 NA|NA|NA O Trypsin-like peptidase domain MAG.C3.5_01910 582744.Msip34_0016 3.3e-101 374.4 Nitrosomonadales 1.1.2.7 ko:K14028 ko00010,ko00625,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00625,map00680,map01100,map01110,map01120,map01130,map01200 M00174 R01146,R09127,R09128,R10713 RC00034,RC00050,RC00087,RC00088 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUQX@1224,2KKUA@206350,2VHVH@28216,COG4993@1,COG4993@2 NA|NA|NA G TIGRFAM PQQ-dependent dehydrogenase, methanol ethanol family MAG.C3.5_01911 583345.Mmol_0633 9.1e-79 299.7 Nitrosomonadales pilU ko:K02670 ko00000,ko02035,ko02044 3.A.15.2 Bacteria 1QTTX@1224,2KKV0@206350,2VIWS@28216,COG5008@1,COG5008@2 NA|NA|NA NU PFAM type II secretion system protein E MAG.C3.5_01912 572480.Arnit_3033 3e-20 105.5 Epsilonproteobacteria Bacteria 1RIIU@1224,2B96M@1,2YRX1@29547,322HU@2,4301T@68525 NA|NA|NA MAG.C3.5_01913 582744.Msip34_0626 8.7e-184 649.8 Nitrosomonadales pyrC GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 ko:K01465 ko00240,ko01100,map00240,map01100 M00051 R01993 RC00632 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVXY@1224,2KKJ0@206350,2VH1E@28216,COG0044@1,COG0044@2 NA|NA|NA F TIGRFAM dihydroorotase, multifunctional complex type MAG.C3.5_01914 582744.Msip34_0627 3.8e-160 570.9 Nitrosomonadales pyrB GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 ko:K00608,ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R01397 RC00064,RC02850 ko00000,ko00001,ko00002,ko01000 iYO844.BSU15490 Bacteria 1MWAB@1224,2KM77@206350,2VHG9@28216,COG0540@1,COG0540@2 NA|NA|NA F aspartate ornithine carbamoyltransferase, carbamoyl-P binding domain MAG.C3.5_01915 265072.Mfla_2101 9.2e-60 236.5 Nitrosomonadales pyrR GO:0003674,GO:0003700,GO:0006139,GO:0006220,GO:0006221,GO:0006355,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0031323,GO:0031326,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0055086,GO:0060255,GO:0065007,GO:0071704,GO:0072527,GO:0072528,GO:0080090,GO:0090407,GO:0140110,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141 2.4.2.9 ko:K02825 ko00240,ko01100,map00240,map01100 R00966 RC00063 ko00000,ko00001,ko01000,ko03000 Bacteria 1RI6U@1224,2KMVB@206350,2VSNM@28216,COG2065@1,COG2065@2 NA|NA|NA F Phosphoribosyl transferase domain MAG.C3.5_01916 582744.Msip34_0629 6.3e-53 213.8 Nitrosomonadales yqgF GO:0000966,GO:0000967,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0140097,GO:1901360 ko:K07447 ko00000,ko01000 Bacteria 1RDHZ@1224,2KN0K@206350,2VUH0@28216,COG0816@1,COG0816@2 NA|NA|NA L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA MAG.C3.5_01917 582744.Msip34_0630 1.8e-67 262.3 Nitrosomonadales yqgE GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K07735 ko00000,ko03000 Bacteria 1RCXM@1224,2KMR8@206350,2VJQA@28216,COG1678@1,COG1678@2 NA|NA|NA K Belongs to the UPF0301 (AlgH) family MAG.C3.5_01918 582744.Msip34_0631 5.1e-156 557.4 Nitrosomonadales ribB 3.5.4.25,4.1.99.12 ko:K02858,ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 M00125,M00840 R00425,R07281 RC00293,RC01792,RC01815,RC02504 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU8P@1224,2KKS1@206350,2VH6S@28216,COG0108@1,COG0108@2,COG0807@1,COG0807@2 NA|NA|NA H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate MAG.C3.5_01919 582744.Msip34_0632 8.1e-79 300.1 Nitrosomonadales ribE GO:0003674,GO:0003824,GO:0004746,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.9,3.5.4.25,4.1.99.12 ko:K00793,ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 M00125,M00840 R00066,R00425,R07281 RC00293,RC00958,RC00960,RC01792,RC01815,RC02504 ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS08950 Bacteria 1MUMB@1224,2KMNG@206350,2VIU0@28216,COG0307@1,COG0307@2 NA|NA|NA H TIGRFAM riboflavin synthase, alpha subunit MAG.C3.5_01920 265072.Mfla_2095 1.1e-183 649.4 Nitrosomonadales lolC GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008104,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0034613,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051641,GO:0070727,GO:0071944,GO:0072657,GO:0089705,GO:0098796,GO:0098797,GO:1990778 ko:K02004,ko:K09808 ko02010,map02010 M00255,M00258 ko00000,ko00001,ko00002,ko02000 3.A.1,3.A.1.125 Bacteria 1MVV7@1224,2KKB0@206350,2VH7C@28216,COG4591@1,COG4591@2 NA|NA|NA M TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family MAG.C3.5_01921 1236959.BAMT01000002_gene2317 2.7e-91 341.7 Nitrosomonadales lolD GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006807,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0015031,GO:0015399,GO:0015405,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0022804,GO:0022857,GO:0030554,GO:0031224,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0042157,GO:0042160,GO:0042623,GO:0042626,GO:0042886,GO:0042953,GO:0043167,GO:0043168,GO:0043170,GO:0043190,GO:0043492,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0045184,GO:0051179,GO:0051234,GO:0051641,GO:0055085,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0072657,GO:0089705,GO:0097159,GO:0097367,GO:0098533,GO:0098796,GO:0098797,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1902495,GO:1904949,GO:1990351,GO:1990778 ko:K09810 ko02010,map02010 M00255 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.125 Bacteria 1MVSQ@1224,2KMB3@206350,2VHAQ@28216,COG1136@1,COG1136@2 NA|NA|NA V Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner MAG.C3.5_01922 1163617.SCD_n01103 8.8e-246 856.7 Betaproteobacteria ycaI GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02238 M00429 ko00000,ko00002,ko02044 3.A.11.1,3.A.11.2 Bacteria 1MUKF@1224,2VHKP@28216,COG0658@1,COG0658@2,COG2333@1,COG2333@2 NA|NA|NA S DNA internalization-related competence protein ComEC Rec2 MAG.C3.5_01924 582744.Msip34_0637 1.4e-91 342.4 Nitrosomonadales exbB2 ko:K03561,ko:K03562 ko01120,map01120 ko00000,ko02000 1.A.30.2.1,1.A.30.2.2 Bacteria 1QNJ1@1224,2KMAP@206350,2VITY@28216,COG0811@1,COG0811@2 NA|NA|NA U PFAM MotA TolQ ExbB proton channel MAG.C3.5_01925 582744.Msip34_0638 1.3e-56 225.7 Nitrosomonadales exbD2 ko:K03559,ko:K03560 ko00000,ko02000 1.A.30.2.1,1.A.30.2.2 Bacteria 1N0ZA@1224,2KMSH@206350,2VUF4@28216,COG0848@1,COG0848@2 NA|NA|NA U PFAM Biopolymer transport protein ExbD TolR MAG.C3.5_01926 582744.Msip34_0639 5.1e-235 820.5 Nitrosomonadales msbA GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006855,GO:0006869,GO:0008144,GO:0008150,GO:0008289,GO:0008559,GO:0009987,GO:0010876,GO:0015221,GO:0015238,GO:0015399,GO:0015405,GO:0015437,GO:0015893,GO:0015920,GO:0016020,GO:0016021,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034040,GO:0034204,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0042626,GO:0042802,GO:0042908,GO:0042910,GO:0043167,GO:0043168,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0061024,GO:0065007,GO:0065008,GO:0071702,GO:0071840,GO:0071944,GO:0097035,GO:0097159,GO:0097367,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901265,GO:1901363,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 ko:K02021,ko:K06147,ko:K11085 ko02010,map02010 ko00000,ko00001,ko01000,ko02000 3.A.1.106,3.A.1.109,3.A.1.110,3.A.1.112,3.A.1.113,3.A.1.117,3.A.1.21 iJN746.PP_4935,iPC815.YPO1395,iUMN146_1321.UM146_12980 Bacteria 1MUBM@1224,2KMBG@206350,2VHAN@28216,COG1132@1,COG1132@2 NA|NA|NA V Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation MAG.C3.5_01927 583345.Mmol_0649 4.6e-92 344.7 Nitrosomonadales lpxK 2.7.1.130 ko:K00912 ko00540,ko01100,map00540,map01100 M00060 R04657 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko01005 Bacteria 1MU8G@1224,2KKX0@206350,2VHPG@28216,COG1663@1,COG1663@2 NA|NA|NA M Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) MAG.C3.5_01928 265072.Mfla_2088 1e-21 108.6 Nitrosomonadales ycaR GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.7.1.130 ko:K00912,ko:K09791 ko00540,ko01100,map00540,map01100 M00060 R04657 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko01005 Bacteria 1N6Y2@1224,2KNA4@206350,2VW58@28216,COG2835@1,COG2835@2 NA|NA|NA S Belongs to the UPF0434 family MAG.C3.5_01929 265072.Mfla_2087 1.7e-89 335.9 Nitrosomonadales kdsB 2.7.7.38 ko:K00979 ko00540,ko01100,map00540,map01100 M00063 R03351,R11396 RC00152,RC00910 ko00000,ko00001,ko00002,ko01000,ko01005 Bacteria 1MUUU@1224,2KKCN@206350,2VINM@28216,COG1212@1,COG1212@2 NA|NA|NA M Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria MAG.C3.5_01932 398578.Daci_0892 9.8e-09 66.6 Comamonadaceae Bacteria 1NIRQ@1224,2VY7C@28216,4AI5Y@80864,COG3755@1,COG3755@2 NA|NA|NA S Pfam:DUF1311 MAG.C3.5_01934 1132855.KB913035_gene1354 1.4e-113 416.0 Betaproteobacteria ko:K15270 ko00000,ko02000 2.A.7.3.7 Bacteria 1MXVF@1224,2VKMQ@28216,COG0697@1,COG0697@2 NA|NA|NA EG of the drug metabolite transporter (DMT) superfamily MAG.C3.5_01935 1165096.ARWF01000001_gene1696 1e-29 136.0 Nitrosomonadales trxA ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Bacteria 1MZ6D@1224,2KN2P@206350,2VU4B@28216,COG0526@1,COG0526@2 NA|NA|NA CO Thioredoxin MAG.C3.5_01936 1288494.EBAPG3_14160 3.4e-199 701.0 Nitrosomonadales hflX GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0044424,GO:0044464 ko:K03665 ko00000,ko03009 Bacteria 1MUA0@1224,2VHVU@28216,371X3@32003,COG2262@1,COG2262@2 NA|NA|NA S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis MAG.C3.5_01937 420662.Mpe_A0675 2.8e-76 291.6 Betaproteobacteria 3.5.1.19 ko:K08281 ko00760,ko01100,map00760,map01100 R01268 RC00100 ko00000,ko00001,ko01000 Bacteria 1RDHA@1224,2VQG4@28216,COG1335@1,COG1335@2 NA|NA|NA Q Isochorismatase MAG.C3.5_01938 582744.Msip34_2430 2.2e-49 201.8 Nitrosomonadales Bacteria 1N2EC@1224,2KMY9@206350,2VUTI@28216,COG0454@1,COG0456@2 NA|NA|NA K Acetyltransferase (GNAT) domain MAG.C3.5_01939 265072.Mfla_0437 7e-81 307.0 Nitrosomonadales Bacteria 1MVQY@1224,2KKK6@206350,2VI57@28216,COG1396@1,COG1396@2,COG3837@1,COG3837@2 NA|NA|NA K Cro/C1-type HTH DNA-binding domain MAG.C3.5_01940 582744.Msip34_2428 4.4e-209 733.8 Nitrosomonadales 1.5.3.1 ko:K00303 ko00260,ko01100,map00260,map01100 R00610 RC00060,RC00557 ko00000,ko00001,ko01000 Bacteria 1MVM6@1224,2KMA5@206350,2VKCE@28216,COG0665@1,COG0665@2 NA|NA|NA E PFAM FAD dependent oxidoreductase MAG.C3.5_01941 666681.M301_1420 4.6e-32 143.7 Nitrosomonadales 1.5.3.1 ko:K00304 ko00260,ko01100,map00260,map01100 R00610 RC00060,RC00557 ko00000,ko00001,ko01000 Bacteria 1NA4N@1224,2KP93@206350,2VX6V@28216,COG4311@1,COG4311@2 NA|NA|NA E PFAM Sarcosine oxidase delta subunit heterotetrameric MAG.C3.5_01942 666681.M301_1419 0.0 1331.2 Nitrosomonadales 1.5.3.1,2.1.2.10 ko:K00302,ko:K00305,ko:K00605 ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200 M00532 R00610,R01221,R02300,R04125 RC00022,RC00060,RC00069,RC00183,RC00557,RC02834 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVEK@1224,2KKZ2@206350,2VK5U@28216,COG0404@1,COG0404@2,COG0446@1,COG0446@2 NA|NA|NA E glycine cleavage T protein (aminomethyl transferase) MAG.C3.5_01943 666681.M301_1418 5.5e-65 254.2 Nitrosomonadales ygfZ 1.5.3.1,2.1.2.10 ko:K00302,ko:K00305,ko:K00605,ko:K06980 ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200 M00532 R00610,R01221,R02300,R04125 RC00022,RC00060,RC00069,RC00183,RC00557,RC02834 ko00000,ko00001,ko00002,ko01000,ko03016 Bacteria 1N2I3@1224,2KMXD@206350,2VVMU@28216,COG0404@1,COG0404@2 NA|NA|NA E Sarcosine oxidase, gamma subunit family MAG.C3.5_01944 666681.M301_1417 1.6e-220 771.9 Nitrosomonadales glnT 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 Bacteria 1MUGQ@1224,2KKXC@206350,2VJ0X@28216,COG0174@1,COG0174@2 NA|NA|NA E PFAM glutamine synthetase catalytic region MAG.C3.5_01945 582744.Msip34_2423 4.4e-142 510.8 Nitrosomonadales glxB 2.1.1.21 ko:K22081 ko00680,ko01120,map00680,map01120 R01586 RC00554 ko00000,ko00001,ko01000 Bacteria 1MWHP@1224,2KKHA@206350,2VM3C@28216,COG0034@1,COG0034@2 NA|NA|NA F Glutamine amidotransferases class-II MAG.C3.5_01946 582744.Msip34_2422 2.7e-46 192.2 Nitrosomonadales glxC 2.1.1.21 ko:K22082,ko:K22083 ko00680,ko01120,map00680,map01120 R01586 RC00554 ko00000,ko00001,ko01000 Bacteria 1MUUQ@1224,2KMHN@206350,2VHP7@28216,COG2218@1,COG2218@2 NA|NA|NA C PFAM glutamate synthase alpha subunit domain protein MAG.C3.5_01947 582744.Msip34_0036 2.1e-103 382.5 Nitrosomonadales algZ 2.7.13.3 ko:K08082 ko02020,map02020 M00493 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1MXVQ@1224,2KM4E@206350,2VH9S@28216,COG2972@1,COG2972@2 NA|NA|NA T PFAM histidine kinase MAG.C3.5_01948 582744.Msip34_0037 3.2e-224 784.3 Nitrosomonadales argH GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 M00029,M00844,M00845 R01086 RC00445,RC00447 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1MUTU@1224,2KMF6@206350,2VH47@28216,COG0165@1,COG0165@2 NA|NA|NA E TIGRFAM argininosuccinate lyase MAG.C3.5_01949 666681.M301_0077 7.3e-53 215.3 Betaproteobacteria ko:K02404 ko00000,ko02035 Bacteria 1NBJC@1224,2VX30@28216,COG3170@1,COG3170@2 NA|NA|NA NU Tfp pilus assembly protein FimV MAG.C3.5_01950 1112274.KI911560_gene1150 1.7e-173 615.5 Nitrosomonadales yggW GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 Bacteria 1MU76@1224,2KM1J@206350,2VHBB@28216,COG0635@1,COG0635@2 NA|NA|NA H Involved in the biosynthesis of porphyrin-containing compound MAG.C3.5_01951 1387312.BAUS01000004_gene1559 1.7e-28 131.3 Nitrosomonadales Bacteria 1N796@1224,2E8PT@1,2KN4R@206350,2VVUA@28216,3330W@2 NA|NA|NA MAG.C3.5_01952 1101195.Meth11DRAFT_0063 1.7e-97 362.1 Nitrosomonadales rdgB GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035870,GO:0036220,GO:0036222,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046983,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66,5.1.1.3 ko:K01776,ko:K02428 ko00230,ko00471,ko01100,map00230,map00471,map01100 R00260,R00426,R00720,R01855,R02100,R02720,R03531 RC00002,RC00302 ko00000,ko00001,ko01000,ko01011 iEC55989_1330.EC55989_3247,iECO111_1330.ECO111_3702,iECSE_1348.ECSE_3222,iECW_1372.ECW_m3212,iEKO11_1354.EKO11_0774,iEcE24377_1341.EcE24377A_3298,iWFL_1372.ECW_m3212 Bacteria 1MUK5@1224,2KKVM@206350,2VQ1Z@28216,COG0127@1,COG0127@2 NA|NA|NA F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions MAG.C3.5_01953 583345.Mmol_0174 2.5e-116 424.9 Nitrosomonadales rph GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043170,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:1901361,GO:1901575 2.7.7.56,3.6.1.66 ko:K00989,ko:K02428 ko00230,map00230 R00426,R00720,R01855,R02100,R02720,R03531 RC00002 ko00000,ko00001,ko01000,ko03016 Bacteria 1MVFZ@1224,2KKE3@206350,2VIGI@28216,COG0689@1,COG0689@2 NA|NA|NA J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates MAG.C3.5_01954 1101195.Meth11DRAFT_0065 6.3e-99 367.5 Nitrosomonadales pphA 3.1.3.16 ko:K20074 ko00000,ko01000,ko01009 Bacteria 1MVE7@1224,2KM5H@206350,2VIAV@28216,COG0631@1,COG0631@2 NA|NA|NA T SMART protein phosphatase 2C domain protein MAG.C3.5_01955 583345.Mmol_0176 8.4e-120 436.8 Nitrosomonadales Bacteria 1PJRR@1224,2KM3Q@206350,2VHMW@28216,COG0515@1,COG0515@2 NA|NA|NA KLT SMART serine threonine protein kinase MAG.C3.5_01956 582744.Msip34_0050 4e-108 397.9 Nitrosomonadales yicC GO:0000175,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009022,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140098,GO:0140101,GO:1901360,GO:1901361,GO:1901575 Bacteria 1MWRA@1224,2KKC1@206350,2VIFC@28216,COG1561@1,COG1561@2 NA|NA|NA S Domain of unknown function (DUF1732) MAG.C3.5_01957 582744.Msip34_0051 1.4e-78 299.3 Nitrosomonadales gmk GO:0003674,GO:0003824,GO:0004385,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8,4.1.1.23 ko:K00942,ko:K01591 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00050,M00051 R00332,R00965,R02090 RC00002,RC00409 ko00000,ko00001,ko00002,ko01000 iAPECO1_1312.APECO1_2813,iIT341.HP0321,iPC815.YPO0040,iSBO_1134.SBO_3729,iSFV_1184.SFV_3881,iSFxv_1172.SFxv_4016,iUTI89_1310.UTI89_C4193 Bacteria 1MW92@1224,2KKGP@206350,2VPCK@28216,COG0194@1,COG0194@2 NA|NA|NA F Essential for recycling GMP and indirectly, cGMP MAG.C3.5_01958 265072.Mfla_0049 4.5e-29 133.3 Nitrosomonadales rpoZ GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030312,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0071944,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 ko:K03060 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Bacteria 1N6TX@1224,2KN43@206350,2VVUH@28216,COG1758@1,COG1758@2 NA|NA|NA K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits MAG.C3.5_01959 582744.Msip34_0053 0.0 1300.8 Nitrosomonadales spoT GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008728,GO:0008893,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009259,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0015949,GO:0015969,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016788,GO:0016794,GO:0019637,GO:0019693,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0033865,GO:0033875,GO:0034032,GO:0034035,GO:0034641,GO:0042278,GO:0042578,GO:0042594,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0071944,GO:0072521,GO:1901068,GO:1901135,GO:1901360,GO:1901564,GO:1901657 2.7.6.5,3.1.7.2 ko:K00951,ko:K01139 ko00230,map00230 R00336,R00429 RC00002,RC00078 ko00000,ko00001,ko01000,ko03009 iECNA114_1301.ECNA114_3794,iECOK1_1307.ECOK1_4092,iECP_1309.ECP_3748,iECS88_1305.ECS88_4065,iECSF_1327.ECSF_3486,iLF82_1304.LF82_2165,iNRG857_1313.NRG857_18145,iUMN146_1321.UM146_18405,iUTI89_1310.UTI89_C4195,ic_1306.c4475 Bacteria 1MU44@1224,2KKTM@206350,2VIA1@28216,COG0317@1,COG0317@2 NA|NA|NA KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance MAG.C3.5_01960 697282.Mettu_3429 3.6e-82 311.2 Methylococcales ko:K07006 ko00000 Bacteria 1NBWC@1224,1S297@1236,1XEVD@135618,COG3576@1,COG3576@2 NA|NA|NA S Pyridoxamine 5'-phosphate oxidase MAG.C3.5_01961 583345.Mmol_0186 2.3e-52 211.5 Nitrosomonadales yjgF 3.5.99.10 ko:K09022 R11098,R11099 RC03275,RC03354 ko00000,ko01000 Bacteria 1MZ3J@1224,2KMVS@206350,2VRQ3@28216,COG0251@1,COG0251@2 NA|NA|NA J Endoribonuclease L-PSP MAG.C3.5_01962 582744.Msip34_0055 3.1e-284 984.2 Nitrosomonadales recG GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1MWN2@1224,2KKN8@206350,2VHE8@28216,COG1200@1,COG1200@2 NA|NA|NA L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) MAG.C3.5_01964 1165096.ARWF01000001_gene1451 9.2e-58 229.9 Nitrosomonadales ubiC GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008813,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.1.3.40 ko:K03181 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00117 R01302 RC00491,RC02148 ko00000,ko00001,ko00002,ko01000 iZ_1308.Z5638 Bacteria 1N8BF@1224,2KN0H@206350,2VU5V@28216,COG3161@1,COG3161@2 NA|NA|NA H Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway MAG.C3.5_01966 1387312.BAUS01000002_gene622 1.9e-40 171.8 Nitrosomonadales yffB GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 1.20.4.1 ko:K00537,ko:K16509 ko00000,ko01000 Bacteria 1MZ6S@1224,2KMXQ@206350,2VUB7@28216,COG1393@1,COG1393@2 NA|NA|NA P Belongs to the ArsC family MAG.C3.5_01967 582744.Msip34_0932 2.7e-138 498.0 Nitrosomonadales dapD GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008666,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009987,GO:0016053,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016749,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.117,2.3.1.89 ko:K00674,ko:K05822 ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230 M00016,M00525 R04364,R04365 RC00004,RC01136 ko00000,ko00001,ko00002,ko01000 iSbBS512_1146.SbBS512_E0158,iYO844.BSU14180 Bacteria 1MU0Y@1224,2KMF7@206350,2VHUX@28216,COG2171@1,COG2171@2 NA|NA|NA E Belongs to the transferase hexapeptide repeat family MAG.C3.5_01968 582744.Msip34_0933 8.1e-119 433.3 Nitrosomonadales Z012_09445 Bacteria 1MUNA@1224,2KKPW@206350,2VHTB@28216,COG0501@1,COG0501@2 NA|NA|NA O Peptidase family M48 MAG.C3.5_01969 582744.Msip34_0934 2.3e-294 1017.7 Nitrosomonadales kup ko:K03549 ko00000,ko02000 2.A.72 Bacteria 1MUVH@1224,2KKXI@206350,2VH9I@28216,COG3158@1,COG3158@2 NA|NA|NA P Transport of potassium into the cell MAG.C3.5_01970 1165096.ARWF01000001_gene108 2.4e-56 226.9 Nitrosomonadales Bacteria 1R4DM@1224,2DBUQ@1,2KN21@206350,2W7ZY@28216,2ZB76@2 NA|NA|NA MAG.C3.5_01971 339670.Bamb_0401 1.9e-134 485.7 Burkholderiaceae hemK1 Bacteria 1K32W@119060,1MV12@1224,2VJVT@28216,COG2890@1,COG2890@2 NA|NA|NA J Pfam Methyltransferase small MAG.C3.5_01972 1502770.JQMG01000001_gene134 1.2e-150 539.7 Nitrosomonadales xseA GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008855,GO:0009056,GO:0009057,GO:0009318,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575,GO:1902494 3.1.11.6 ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 1MUA4@1224,2KKEN@206350,2VJIC@28216,COG1570@1,COG1570@2 NA|NA|NA L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides MAG.C3.5_01973 666681.M301_1932 7.2e-65 253.4 Nitrosomonadales dsbB ko:K03611 ko00000,ko03110 5.A.2.1 Bacteria 1RIJE@1224,2KMR0@206350,2VREE@28216,COG1495@1,COG1495@2 NA|NA|NA O Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein MAG.C3.5_01974 582744.Msip34_0938 2.8e-149 534.6 Nitrosomonadales cysM GO:0000003,GO:0000096,GO:0000097,GO:0000902,GO:0000904,GO:0003006,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005777,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0007568,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009507,GO:0009532,GO:0009536,GO:0009566,GO:0009567,GO:0009570,GO:0009653,GO:0009826,GO:0009856,GO:0009860,GO:0009932,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016043,GO:0016049,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0019953,GO:0022414,GO:0030154,GO:0030170,GO:0031090,GO:0032501,GO:0032502,GO:0032989,GO:0036094,GO:0040007,GO:0042221,GO:0042579,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0046394,GO:0046686,GO:0048037,GO:0048046,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048868,GO:0048869,GO:0050662,GO:0050896,GO:0051704,GO:0060560,GO:0070279,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 ko:K01738,ko:K12339 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 M00021 R00897,R03132,R03601,R04859 RC00020,RC02814,RC02821,RC02876 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUBE@1224,2KMC4@206350,2VH7B@28216,COG0031@1,COG0031@2 NA|NA|NA E Belongs to the cysteine synthase cystathionine beta- synthase family MAG.C3.5_01975 582744.Msip34_0942 8.1e-124 449.9 Nitrosomonadales wlaX ko:K07501 ko00000 Bacteria 1MVZJ@1224,2KKD0@206350,2VISP@28216,COG3298@1,COG3298@2 NA|NA|NA L Predicted 3'-5' exonuclease related to the exonuclease domain of PolB MAG.C3.5_01976 582744.Msip34_2765 1.5e-88 332.8 Nitrosomonadales ko:K22044 ko00000,ko02000 1.A.23.3 Bacteria 1MY0I@1224,2KKH7@206350,2VKTC@28216,COG0668@1,COG0668@2 NA|NA|NA M Mechanosensitive ion channel MAG.C3.5_01977 582744.Msip34_2764 7.1e-294 1016.1 Nitrosomonadales ams 2.4.1.4,3.2.1.1,5.4.99.16 ko:K05341,ko:K05343 ko00500,ko01100,map00500,map01100 R01557,R01823,R02108,R02112,R11262 RC00028,RC01816 ko00000,ko00001,ko01000 GH13 Bacteria 1MVKX@1224,2KKFD@206350,2VM7M@28216,COG0366@1,COG0366@2 NA|NA|NA G Glycogen debranching enzyme, glucanotransferase domain MAG.C3.5_01978 582744.Msip34_2763 1.9e-303 1048.1 Nitrosomonadales sps GO:0003674,GO:0003824,GO:0005975,GO:0005984,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016311,GO:0016740,GO:0016757,GO:0016758,GO:0016787,GO:0016788,GO:0016791,GO:0034637,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0046351,GO:0071704,GO:1901576 2.4.1.14,2.4.1.246,3.1.3.24,3.1.3.79 ko:K00696,ko:K07024,ko:K13058,ko:K13086 ko00500,ko01100,map00500,map01100 R00766,R00805,R06211,R08947,R08982 RC00005,RC00017,RC00028,RC02748 ko00000,ko00001,ko01000 GT4 Bacteria 1MWVX@1224,2KKNC@206350,2VN6U@28216,COG0438@1,COG0438@2,COG0561@1,COG0561@2 NA|NA|NA M Sucrose-6F-phosphate phosphohydrolase MAG.C3.5_01979 265072.Mfla_2609 2.1e-102 379.0 Nitrosomonadales scrK 2.7.1.4 ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 R00760,R00867,R03920 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 1PCFU@1224,2KMJK@206350,2VK5G@28216,COG0524@1,COG0524@2 NA|NA|NA G pfkB family carbohydrate kinase MAG.C3.5_01980 1165096.ARWF01000001_gene1367 4.7e-35 154.5 Betaproteobacteria Bacteria 1PW9W@1224,2VUDE@28216,COG1846@1,COG1846@2 NA|NA|NA K MarR family MAG.C3.5_01981 338969.Rfer_1828 2.1e-19 101.7 Comamonadaceae lonD 3.4.21.53 ko:K01338,ko:K07157 ko04112,map04112 ko00000,ko00001,ko01000,ko01002 Bacteria 1RFYH@1224,2VSA4@28216,4ADGM@80864,COG2802@1,COG2802@2 NA|NA|NA S PFAM peptidase S16 lon domain protein MAG.C3.5_01982 1112274.KI911560_gene1110 1.3e-140 506.5 Nitrosomonadales gabR_1 ko:K00375 ko00000,ko03000 Bacteria 1MV6F@1224,2KM87@206350,2VHE6@28216,COG1167@1,COG1167@2 NA|NA|NA EK helix_turn_helix gluconate operon transcriptional repressor MAG.C3.5_01983 1163617.SCD_n01943 1.1e-135 489.6 Betaproteobacteria hda Bacteria 1MU7P@1224,2VIK8@28216,COG0123@1,COG0123@2 NA|NA|NA BQ histone deacetylase MAG.C3.5_01984 1163617.SCD_n01944 0.0 1354.3 Betaproteobacteria yfiQ 6.2.1.13 ko:K01905,ko:K09181,ko:K22224 ko00010,ko00620,ko00640,ko01100,ko01120,map00010,map00620,map00640,map01100,map01120 R00229,R00920 RC00004,RC00012,RC00014 ko00000,ko00001,ko01000,ko01004 Bacteria 1MW98@1224,2VI9R@28216,COG0045@1,COG0045@2,COG0454@1,COG0456@2,COG1042@1,COG1042@2 NA|NA|NA C CoA-binding domain protein MAG.C3.5_01985 1101195.Meth11DRAFT_0011 1.2e-77 296.2 Nitrosomonadales ko:K07006 ko00000 Bacteria 1NBWC@1224,2KNWX@206350,2VKQ8@28216,COG3576@1,COG3576@2 NA|NA|NA S Pyridoxamine 5'-phosphate oxidase MAG.C3.5_01986 1236959.BAMT01000008_gene2508 9.8e-35 152.9 Nitrosomonadales Bacteria 1PJNE@1224,2KNDG@206350,2W652@28216,COG3370@1,COG3370@2 NA|NA|NA S DsrE/DsrF-like family MAG.C3.5_01987 102125.Xen7305DRAFT_00019930 1.2e-28 133.3 Pleurocapsales Bacteria 1G76B@1117,3VJUR@52604,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family MAG.C3.5_01990 582744.Msip34_2194 2.7e-206 724.5 Nitrosomonadales lysC GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006553,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.3,2.7.2.4 ko:K00928,ko:K12524 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00017,M00018,M00033,M00525,M00526,M00527 R00480,R01773,R01775 RC00002,RC00043,RC00087 ko00000,ko00001,ko00002,ko01000 Bacteria 1MW3H@1224,2KMF2@206350,2VINP@28216,COG0527@1,COG0527@2 NA|NA|NA E Belongs to the aspartokinase family MAG.C3.5_01991 1112274.KI911560_gene1898 4e-155 554.3 Nitrosomonadales alaS GO:0001130,GO:0001131,GO:0001141,GO:0001217,GO:0002161,GO:0002196,GO:0003674,GO:0003700,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006355,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009451,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0016597,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0052689,GO:0060255,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:0140110,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 6.1.1.7 ko:K01872 ko00970,map00970 M00359,M00360 R03038 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iECABU_c1320.ECABU_c29670,iECED1_1282.ECED1_3146,iEcHS_1320.EcHS_A2833,iJN746.PP_4474 Bacteria 1MU9A@1224,2KMGG@206350,2VH6Z@28216,COG0013@1,COG0013@2 NA|NA|NA J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain MAG.C3.5_01992 1236959.BAMT01000004_gene893 1.7e-80 305.4 Nitrosomonadales ctc GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02897 ko03010,map03010 M00178 ko00000,ko00001,ko00002,ko03011 Bacteria 1RDH0@1224,2KKVD@206350,2VQNU@28216,COG1825@1,COG1825@2 NA|NA|NA J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance MAG.C3.5_01993 1236959.BAMT01000004_gene892 9.1e-80 303.1 Nitrosomonadales pth GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 ko:K01056 ko00000,ko01000,ko03012 Bacteria 1MX1P@1224,2KKY6@206350,2VKKJ@28216,COG0193@1,COG0193@2 NA|NA|NA J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis MAG.C3.5_01994 1101195.Meth11DRAFT_1989 1e-229 803.5 Nitrosomonadales Bacteria 1MU2C@1224,2KKWS@206350,2VH3V@28216,COG5001@1,COG5001@2 NA|NA|NA T PFAM EAL domain MAG.C3.5_01996 666681.M301_2422 1.1e-134 486.5 Nitrosomonadales murG GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0050511,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.4.1.227 ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 R05032,R05662 RC00005,RC00049 ko00000,ko00001,ko01000,ko01011 GT28 iLJ478.TM0232,iSFV_1184.SFV_0083,iSF_1195.SF0087,iSFxv_1172.SFxv_0091,iS_1188.S0089 Bacteria 1MVIB@1224,2KM6Q@206350,2VH32@28216,COG0707@1,COG0707@2 NA|NA|NA M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) MAG.C3.5_01997 582744.Msip34_0459 2.5e-185 654.8 Nitrosomonadales ftsW GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0008360,GO:0009987,GO:0015647,GO:0015648,GO:0015835,GO:0015836,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032153,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051179,GO:0051234,GO:0051301,GO:0055085,GO:0065007,GO:0065008,GO:0071702,GO:0071705,GO:0071944,GO:1901264,GO:1901505 2.4.1.227 ko:K02563,ko:K03588 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 R05032,R05662 RC00005,RC00049 ko00000,ko00001,ko01000,ko01011,ko02000,ko03036 2.A.103.1 GT28 Bacteria 1MVDB@1224,2KM9S@206350,2VI5Q@28216,COG0772@1,COG0772@2 NA|NA|NA M Peptidoglycan polymerase that is essential for cell division MAG.C3.5_01998 583345.Mmol_2006 1.3e-172 612.8 Nitrosomonadales murD GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008764,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.9 ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 R02783 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 iAPECO1_1312.APECO1_1898,iECNA114_1301.ECNA114_0081,iECOK1_1307.ECOK1_0089,iECP_1309.ECP_0090,iECS88_1305.ECS88_0091,iECSF_1327.ECSF_0098,iLF82_1304.LF82_1418,iNRG857_1313.NRG857_00450,iUMN146_1321.UM146_23225,iUTI89_1310.UTI89_C0097 Bacteria 1MVYD@1224,2KM82@206350,2VHJ1@28216,COG0771@1,COG0771@2 NA|NA|NA M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) MAG.C3.5_01999 1132855.KB913035_gene628 1.2e-176 625.9 Nitrosomonadales mraY GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 R05629,R05630 RC00002,RC02753 ko00000,ko00001,ko01000,ko01011 9.B.146 iAF987.Gmet_0409,iEC042_1314.EC042_0088,iECABU_c1320.ECABU_c00920,iECED1_1282.ECED1_0088,iECH74115_1262.ECH74115_0095,iECSP_1301.ECSP_0090,iECs_1301.ECs0091,iG2583_1286.G2583_0091,iSDY_1059.SDY_0117,iZ_1308.Z0097,ic_1306.c0105 Bacteria 1MUTK@1224,2KME5@206350,2VHAP@28216,COG0472@1,COG0472@2 NA|NA|NA M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan MAG.C3.5_02000 1236959.BAMT01000002_gene2117 2e-154 552.4 Nitrosomonadales murF GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008766,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0047480,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.10 ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 R04573,R04617 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 iB21_1397.B21_00086,iEC042_1314.EC042_0087,iEC55989_1330.EC55989_0082,iECBD_1354.ECBD_3531,iECB_1328.ECB_00087,iECD_1391.ECD_00087,iECIAI1_1343.ECIAI1_0085,iECO103_1326.ECO103_0088,iECO111_1330.ECO111_0089,iECO26_1355.ECO26_0089,iECSE_1348.ECSE_0088,iECW_1372.ECW_m0085,iEKO11_1354.EKO11_3828,iEcE24377_1341.EcE24377A_0088,iEcHS_1320.EcHS_A0092,iEcolC_1368.EcolC_3571,iSBO_1134.SBO_0074,iSSON_1240.SSON_0094,iSbBS512_1146.SbBS512_E0079,iUMNK88_1353.UMNK88_86,iWFL_1372.ECW_m0085,iYL1228.KPN_00090 Bacteria 1QTSF@1224,2KMCV@206350,2VH2H@28216,COG0770@1,COG0770@2 NA|NA|NA M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein MAG.C3.5_02001 582744.Msip34_0455 1.7e-167 595.9 Nitrosomonadales murE GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 3.4.16.4,6.3.2.10,6.3.2.13 ko:K01928,ko:K03587,ko:K15792 ko00300,ko00550,ko01501,map00300,map00550,map01501 R02788,R04617 RC00064,RC00090,RC00141 ko00000,ko00001,ko01000,ko01011,ko03036 iECO103_1326.ECO103_0087,iECO111_1330.ECO111_0088,iECW_1372.ECW_m0084,iEKO11_1354.EKO11_3829,iWFL_1372.ECW_m0084,ic_1306.c0103 Bacteria 1MU6P@1224,2KMDD@206350,2WGFS@28216,COG0769@1,COG0769@2 NA|NA|NA M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan MAG.C3.5_02002 582744.Msip34_0454 3.2e-274 950.7 Nitrosomonadales ftsI GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008144,GO:0008150,GO:0008658,GO:0008955,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0031224,GO:0031226,GO:0031406,GO:0032153,GO:0033218,GO:0033293,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:1901363,GO:1901681 3.4.16.4 ko:K03587,ko:K08384,ko:K08724,ko:K12552,ko:K12556 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011,ko03036 iSSON_1240.SSON_0092 Bacteria 1MUNY@1224,2KM24@206350,2VIZM@28216,COG0768@1,COG0768@2 NA|NA|NA M Catalyzes cross-linking of the peptidoglycan cell wall at the division septum MAG.C3.5_02003 582744.Msip34_0453 3.5e-31 140.6 Nitrosomonadales ftsL GO:0000003,GO:0000910,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0019954,GO:0022402,GO:0022414,GO:0031224,GO:0031226,GO:0032153,GO:0032505,GO:0043093,GO:0044425,GO:0044459,GO:0044464,GO:0051301,GO:0071944 ko:K03586 ko00000,ko03036 Bacteria 1N6WK@1224,2KN6B@206350,2VW1W@28216,COG3116@1,COG3116@2 NA|NA|NA D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic MAG.C3.5_02004 265072.Mfla_2277 1.3e-131 476.1 Nitrosomonadales rsmH GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 ko:K03438 ko00000,ko01000,ko03009 Bacteria 1MUT4@1224,2KM8S@206350,2VIYT@28216,COG0275@1,COG0275@2 NA|NA|NA M Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA MAG.C3.5_02005 582744.Msip34_0451 2.7e-68 264.6 Nitrosomonadales mraZ GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 ko:K03925 ko00000 Bacteria 1RHCG@1224,2KMKN@206350,2VRGP@28216,COG2001@1,COG2001@2 NA|NA|NA K Belongs to the MraZ family MAG.C3.5_02007 1123368.AUIS01000031_gene1431 8.7e-143 513.5 Gammaproteobacteria spt 2.6.1.44,2.6.1.45,2.6.1.51 ko:K00830 ko00250,ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko04146,map00250,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200,map04146 M00346,M00532 R00369,R00372,R00585,R00588 RC00006,RC00008,RC00018 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1MWHJ@1224,1RMNR@1236,COG0075@1,COG0075@2 NA|NA|NA E Serine-pyruvate aminotransferase archaeal aspartate aminotransferase MAG.C3.5_02008 666681.M301_2433 4.7e-156 557.4 Nitrosomonadales pyrC GO:0003674,GO:0003824,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.5.2.3 ko:K01465 ko00240,ko01100,map00240,map01100 M00051 R01993 RC00632 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUYP@1224,2KKH8@206350,2VH6F@28216,COG0418@1,COG0418@2 NA|NA|NA F Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate MAG.C3.5_02009 582744.Msip34_2310 1.7e-108 399.1 Nitrosomonadales rsmI GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.198 ko:K07056 ko00000,ko01000,ko03009 Bacteria 1MU0E@1224,2KKNX@206350,2VHI1@28216,COG0313@1,COG0313@2 NA|NA|NA H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA MAG.C3.5_02010 582744.Msip34_2311 1.2e-137 496.9 Nitrosomonadales lpoA GO:0000270,GO:0003674,GO:0005575,GO:0005623,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0030203,GO:0030234,GO:0030312,GO:0030313,GO:0031241,GO:0031975,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044425,GO:0044462,GO:0044464,GO:0050790,GO:0065007,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0098552,GO:0098772,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 ko:K03466,ko:K07121 ko00000,ko03036 3.A.12 Bacteria 1MUHR@1224,2KMUT@206350,2VSUT@28216,COG3107@1,COG3107@2 NA|NA|NA M LppC putative lipoprotein MAG.C3.5_02011 666681.M301_2436 1.4e-32 145.6 Nitrosomonadales yraN ko:K07460 ko00000 Bacteria 1N6VN@1224,2KN5R@206350,2VU20@28216,COG0792@1,COG0792@2 NA|NA|NA L Belongs to the UPF0102 family MAG.C3.5_02012 582744.Msip34_2313 2.6e-74 285.0 Nitrosomonadales gmhA GO:0003674,GO:0005488,GO:0005515,GO:0006275,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010556,GO:0010557,GO:0010604,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032298,GO:0042802,GO:0045740,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0060255,GO:0065007,GO:0080090,GO:0090329,GO:2000105,GO:2000112 2.7.1.167,2.7.1.33,2.7.7.70,5.3.1.28 ko:K03271,ko:K03272,ko:K03525,ko:K12961 ko00540,ko00770,ko01100,map00540,map00770,map01100 M00064,M00120 R02971,R03018,R04391,R05644,R05645,R05646,R09768,R09769 RC00002,RC00017,RC00078,RC00434 ko00000,ko00001,ko00002,ko01000,ko01005,ko03036 Bacteria 1NJ8X@1224,2KN0V@206350,2VN12@28216,COG0279@1,COG0279@2 NA|NA|NA G SIS domain MAG.C3.5_02013 265072.Mfla_2285 1.2e-60 239.6 Nitrosomonadales Bacteria 1MUZ2@1224,2KMN0@206350,2VQIS@28216,COG2823@1,COG2823@2 NA|NA|NA S BON domain MAG.C3.5_02014 582744.Msip34_2315 2e-43 181.4 Nitrosomonadales Bacteria 1N7JM@1224,2KMZD@206350,2VW2N@28216,COG0454@1,COG0456@2 NA|NA|NA K Protein of unknown function (DUF3579) MAG.C3.5_02015 1132855.KB913035_gene611 2.1e-50 205.3 Nitrosomonadales resA ko:K02199 ko00000,ko03110 Bacteria 1N4HY@1224,2KN5X@206350,2VSKM@28216,COG0526@1,COG0526@2 NA|NA|NA CO PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen MAG.C3.5_02016 582744.Msip34_2318 3.6e-107 395.6 Nitrosomonadales Bacteria 1PD07@1224,2C2C7@1,2KM9R@206350,2VSM7@28216,2Z85G@2 NA|NA|NA MAG.C3.5_02017 582744.Msip34_2319 1.3e-128 466.5 Nitrosomonadales Bacteria 1PDZY@1224,2KNN2@206350,2VM72@28216,COG2200@1,COG2200@2 NA|NA|NA T Putative diguanylate phosphodiesterase MAG.C3.5_02018 1236959.BAMT01000002_gene2100 6.2e-54 216.5 Nitrosomonadales trxA GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 iECW_1372.ECW_m4079,iECs_1301.ECs4714,iEKO11_1354.EKO11_4576,iG2583_1286.G2583_4574,iSBO_1134.SBO_3791,iSDY_1059.SDY_3968,iSF_1195.SF3854,iSSON_1240.SSON_3952,iS_1188.S3905,iWFL_1372.ECW_m4079,iZ_1308.Z5291 Bacteria 1MZBB@1224,2KMW7@206350,2VSHX@28216,COG3118@1,COG3118@2 NA|NA|NA O Belongs to the thioredoxin family MAG.C3.5_02019 582744.Msip34_2321 2.3e-229 801.2 Nitrosomonadales rho GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 ko:K02887,ko:K03628 ko03010,ko03018,map03010,map03018 M00178 br01610,ko00000,ko00001,ko00002,ko03011,ko03019,ko03021 Bacteria 1MUCF@1224,2KM7K@206350,2VJ2E@28216,COG1158@1,COG1158@2 NA|NA|NA K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template MAG.C3.5_02020 1122236.KB905146_gene1948 2.3e-30 137.5 Nitrosomonadales rpmE GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02909 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1MZ69@1224,2KP7H@206350,2VW5V@28216,COG0254@1,COG0254@2 NA|NA|NA J Ribosomal protein L31 MAG.C3.5_02021 582744.Msip34_2323 6.7e-213 746.9 Nitrosomonadales Bacteria 1PUE3@1224,2KMGR@206350,2VHPU@28216,COG1807@1,COG1807@2 NA|NA|NA M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family MAG.C3.5_02022 1502770.JQMG01000001_gene500 1.5e-129 469.9 Nitrosomonadales Bacteria 1MVMG@1224,2KKJQ@206350,2VRIT@28216,COG0457@1,COG0457@2 NA|NA|NA S Putative 2OG-Fe(II) oxygenase MAG.C3.5_02023 666681.M301_2450 2.8e-153 548.1 Nitrosomonadales moaA 4.1.99.22 ko:K03639 ko00790,ko01100,ko04122,map00790,map01100,map04122 R09394 RC03420 ko00000,ko00001,ko01000 Bacteria 1MW3W@1224,2KM1Z@206350,2VHW4@28216,COG2896@1,COG2896@2 NA|NA|NA H Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate MAG.C3.5_02024 666681.M301_2451 1.3e-57 229.6 Nitrosomonadales mobA GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019538,GO:0019637,GO:0019720,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061603,GO:0070568,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902757,GO:1902758 2.10.1.1,2.7.7.77 ko:K03750,ko:K03752,ko:K13818 ko00790,ko01100,map00790,map01100 R09735,R11581 RC03462 ko00000,ko00001,ko01000 iAPECO1_1312.APECO1_2604,iEcHS_1320.EcHS_A4080,iEcolC_1368.EcolC_4158,iLF82_1304.LF82_1370,iNRG857_1313.NRG857_19230,iSBO_1134.SBO_3869,iSbBS512_1146.SbBS512_E4329,iUMNK88_1353.UMNK88_4686,ic_1306.c4801 Bacteria 1RH3M@1224,2KMUA@206350,2VQR2@28216,COG0746@1,COG0746@2 NA|NA|NA H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor MAG.C3.5_02025 582744.Msip34_2331 9.9e-49 199.9 Nitrosomonadales mobB GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 2.10.1.1,2.7.7.77 ko:K02379,ko:K03750,ko:K03752,ko:K03753,ko:K13818 ko00790,ko01100,map00790,map01100 R09735,R11581 RC03462 ko00000,ko00001,ko01000 iB21_1397.B21_03691,iBWG_1329.BWG_3527,iECBD_1354.ECBD_4174,iECDH1ME8569_1439.ECDH1ME8569_3728,iEcDH1_1363.EcDH1_4130,iJO1366.b3856,iSbBS512_1146.SbBS512_E4328,iY75_1357.Y75_RS17805 Bacteria 1RD3Q@1224,2KN23@206350,2VSIP@28216,COG1763@1,COG1763@2 NA|NA|NA H Molybdopterin guanine dinucleotide synthesis protein B MAG.C3.5_02026 582744.Msip34_1097 1.4e-171 609.0 Nitrosomonadales mrp ko:K03593 ko00000,ko03029,ko03036 Bacteria 1MU7R@1224,2KKRQ@206350,2VIMV@28216,COG0489@1,COG0489@2 NA|NA|NA D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP MAG.C3.5_02027 1101195.Meth11DRAFT_0948 2.8e-91 341.7 Nitrosomonadales pgl GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009051,GO:0009117,GO:0009987,GO:0016020,GO:0016787,GO:0016788,GO:0017057,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0052689,GO:0055086,GO:0071704,GO:0071944,GO:0072524,GO:1901135,GO:1901360,GO:1901564 3.1.1.31 ko:K01057,ko:K02003 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 M00004,M00006,M00008,M00258 R02035 RC00537 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1 Bacteria 1R5K6@1224,2KKG0@206350,2VRZM@28216,COG0363@1,COG0363@2 NA|NA|NA G PFAM glucosamine galactosamine-6-phosphate isomerase MAG.C3.5_02028 582744.Msip34_1094 1.3e-131 476.1 Nitrosomonadales gnd 1.1.1.343,1.1.1.44 ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 M00004,M00006 R01528,R10221 RC00001,RC00539 ko00000,ko00001,ko00002,ko01000 Bacteria 1QU14@1224,2KKYK@206350,2WH34@28216,COG1023@1,COG1023@2 NA|NA|NA G TIGRFAM 6-phosphogluconate dehydrogenase (decarboxylating) MAG.C3.5_02032 1502770.JQMG01000001_gene2386 6.3e-131 474.6 Nitrosomonadales Bacteria 1MV8P@1224,2KMD5@206350,2VNJT@28216,COG3746@1,COG3746@2 NA|NA|NA P Putative porin MAG.C3.5_02033 1502770.JQMG01000001_gene2387 6e-54 217.6 Nitrosomonadales tonB2 ko:K03832,ko:K07277 ko00000,ko02000,ko03029 1.B.33,2.C.1.1 Bacteria 1RFY5@1224,2KM40@206350,2VR5E@28216,COG0810@1,COG0810@2 NA|NA|NA M TonB C terminal MAG.C3.5_02034 265072.Mfla_2402 4.4e-57 227.3 Nitrosomonadales exbD2 ko:K03559 ko00000,ko02000 1.A.30.2.1 Bacteria 1RF1B@1224,2KMNC@206350,2VRZF@28216,COG0848@1,COG0848@2 NA|NA|NA U Biopolymer transport protein ExbD/TolR MAG.C3.5_02035 265072.Mfla_2403 6.2e-51 206.8 Nitrosomonadales exbD2 ko:K03559 ko00000,ko02000 1.A.30.2.1 Bacteria 1RJCA@1224,2KP85@206350,2VSW4@28216,COG0848@1,COG0848@2 NA|NA|NA U Biopolymer transport protein ExbD/TolR MAG.C3.5_02036 1288494.EBAPG3_5000 1.1e-186 659.8 Nitrosomonadales exbB ko:K03561,ko:K03562 ko01120,map01120 ko00000,ko02000 1.A.30.2.1,1.A.30.2.2 Bacteria 1N2RJ@1224,2VM7W@28216,372QU@32003,COG0811@1,COG0811@2 NA|NA|NA U Domain of unknown function (DUF2341) MAG.C3.5_02037 1502770.JQMG01000001_gene2391 7e-124 450.7 Nitrosomonadales fhaC5 Bacteria 1PRBP@1224,2KMHZ@206350,2VHDS@28216,COG2831@1,COG2831@2 NA|NA|NA U Haemolysin secretion/activation protein ShlB/FhaC/HecB MAG.C3.5_02038 666681.M301_2479 4e-60 237.7 Nitrosomonadales arsC2 1.20.4.1 ko:K03741 ko00000,ko01000 Bacteria 1MWYQ@1224,2KMYY@206350,2VI3V@28216,COG0394@1,COG0394@2 NA|NA|NA T PFAM Protein-tyrosine phosphatase, low molecular weight MAG.C3.5_02039 305700.B447_04247 3.2e-23 114.0 Rhodocyclales Bacteria 1N728@1224,2KXBY@206389,2VWXC@28216,COG0526@1,COG0526@2 NA|NA|NA CO Thioredoxin domain MAG.C3.5_02040 1221522.B723_11270 2.4e-139 501.9 Gammaproteobacteria ko:K07089 ko00000 Bacteria 1MUN8@1224,1RR9N@1236,COG0701@1,COG0701@2 NA|NA|NA S permease MAG.C3.5_02041 1297863.APJF01000010_gene3119 1.1e-43 183.0 Bradyrhizobiaceae cadI GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0050896 4.4.1.5 ko:K01759 ko00620,map00620 R02530 RC00004,RC00740 ko00000,ko00001,ko01000 Bacteria 1RHIV@1224,2TR4K@28211,3JY40@41294,COG0346@1,COG0346@2 NA|NA|NA E glyoxalase bleomycin resistance protein dioxygenase MAG.C3.5_02042 595536.ADVE02000001_gene2429 9.5e-24 116.3 Methylocystaceae cadC 1.20.4.1 ko:K03741,ko:K03892 ko00000,ko01000,ko03000 Bacteria 1MZAU@1224,2U9NV@28211,36YSF@31993,COG0640@1,COG0640@2 NA|NA|NA K helix_turn_helix, Arsenical Resistance Operon Repressor MAG.C3.5_02043 265072.Mfla_2409 2e-42 179.5 Nitrosomonadales Bacteria 1N4IH@1224,2KP7N@206350,2VU70@28216,COG2197@1,COG2197@2 NA|NA|NA K helix_turn_helix, Lux Regulon MAG.C3.5_02044 1502770.JQMG01000001_gene2393 1e-82 314.3 Betaproteobacteria Bacteria 1RM4A@1224,2B14X@1,2VT75@28216,31TIS@2 NA|NA|NA MAG.C3.5_02047 582744.Msip34_2772 2e-33 148.3 Nitrosomonadales ko:K03892 ko00000,ko03000 Bacteria 1MZPS@1224,2KN4B@206350,2VUHJ@28216,COG0640@1,COG0640@2 NA|NA|NA K helix_turn_helix, Arsenical Resistance Operon Repressor MAG.C3.5_02048 1101195.Meth11DRAFT_1162 4.2e-32 143.7 Nitrosomonadales infA GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009986,GO:0030246,GO:0030247,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:2001065 ko:K02518 ko00000,ko03012 Bacteria 1MZFU@1224,2KN2T@206350,2VU4I@28216,COG0361@1,COG0361@2 NA|NA|NA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex MAG.C3.5_02049 1165096.ARWF01000001_gene402 8.7e-30 135.6 Nitrosomonadales scoF ko:K03704 ko00000,ko03000 Bacteria 1N6Q5@1224,2KNYH@206350,2WAP9@28216,COG1278@1,COG1278@2 NA|NA|NA K Cold shock protein domain MAG.C3.5_02050 1026882.MAMP_00519 2.4e-72 278.9 Gammaproteobacteria ko:K03406 ko02020,ko02030,map02020,map02030 ko00000,ko00001,ko02035 Bacteria 1R5X6@1224,1S8A3@1236,COG0840@1,COG0840@2 NA|NA|NA NT methyl-accepting chemotaxis protein MAG.C3.5_02051 666681.M301_1426 1.3e-49 202.2 Nitrosomonadales eutQ ko:K04019,ko:K04030 ko00564,ko01100,map00564,map01100 R00749 RC00370 ko00000,ko00001 Bacteria 1NX4X@1224,2KNWR@206350,2W84D@28216,COG4766@1,COG4766@2 NA|NA|NA E Ethanolamine utilisation protein EutQ MAG.C3.5_02053 666681.M301_1396 3e-136 491.5 Nitrosomonadales fixB GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006575,GO:0006577,GO:0006579,GO:0006629,GO:0006631,GO:0006635,GO:0006807,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009437,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0034641,GO:0036094,GO:0042219,GO:0042413,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044270,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:0097164,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 1.3.8.1 ko:K00248,ko:K03522 ko00071,ko00280,ko00650,ko01100,ko01110,ko01120,ko01200,ko01212,map00071,map00280,map00650,map01100,map01110,map01120,map01200,map01212 R01175,R01178,R02661,R03172,R04751 RC00052,RC00068,RC00076,RC00120,RC00148 ko00000,ko00001,ko01000,ko04147 Bacteria 1MUFI@1224,2KKF9@206350,2VJWA@28216,COG2025@1,COG2025@2 NA|NA|NA C Electron transfer flavoprotein FAD-binding domain MAG.C3.5_02054 666681.M301_1397 1.3e-121 442.6 Nitrosomonadales ko:K03521 ko00000 iAF987.Gmet_2266 Bacteria 1MYID@1224,2KMHE@206350,2W131@28216,COG2086@1,COG2086@2 NA|NA|NA C Electron transfer flavoprotein domain MAG.C3.5_02055 1267005.KB911260_gene3382 1.1e-11 76.3 Alphaproteobacteria Bacteria 1NDIB@1224,2VFW3@28211,COG1413@1,COG1413@2 NA|NA|NA C lyase activity MAG.C3.5_02056 666681.M301_2731 6.8e-89 334.3 Nitrosomonadales ko:K18302 M00642 ko00000,ko00002,ko01504,ko02000 2.A.6.2,8.A.1 Bacteria 1NJDF@1224,2KM0E@206350,2VIS6@28216,COG0845@1,COG0845@2 NA|NA|NA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family MAG.C3.5_02057 666681.M301_2732 6.6e-76 290.4 Nitrosomonadales ttgR Bacteria 1N6R3@1224,2KMJV@206350,2VSN4@28216,COG1309@1,COG1309@2 NA|NA|NA K WHG domain MAG.C3.5_02058 857087.Metme_3255 1.4e-75 290.0 Methylococcales ko:K02051 M00188 ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 Bacteria 1MVJA@1224,1S43R@1236,1XGFV@135618,COG0715@1,COG0715@2 NA|NA|NA P NMT1-like family MAG.C3.5_02059 1150621.SMUL_0601 5.9e-202 711.4 Epsilonproteobacteria Bacteria 1MU2C@1224,2YN16@29547,42M0W@68525,COG5001@1,COG5001@2 NA|NA|NA T GGDEF EAL family protein MAG.C3.5_02060 582744.Msip34_2626 3.4e-127 461.5 Nitrosomonadales ko:K07714 ko02020,map02020 M00500 ko00000,ko00001,ko00002,ko02022 Bacteria 1MU0N@1224,2KKBW@206350,2VHSB@28216,COG2204@1,COG2204@2 NA|NA|NA T PFAM sigma-54 factor interaction domain-containing protein MAG.C3.5_02061 666681.M301_0373 3e-39 167.5 Nitrosomonadales radC ko:K03630 ko00000 Bacteria 1MXZ5@1224,2KKTE@206350,2VKTW@28216,COG2003@1,COG2003@2 NA|NA|NA L TIGRFAM DNA repair protein RadC MAG.C3.5_02062 686340.Metal_2785 1.1e-38 166.0 Methylococcales ko:K14673 ko00000,ko01008 Bacteria 1N00P@1224,1S759@1236,1XFIZ@135618,COG0662@1,COG0662@2 NA|NA|NA G Cupin domain MAG.C3.5_02063 1387312.BAUS01000001_gene1247 5.8e-185 653.7 Nitrosomonadales nasA 1.7.7.2 ko:K00367,ko:K00372 ko00910,ko01120,map00910,map01120 M00531 R00791,R00798,R01106 RC02812 ko00000,ko00001,ko00002,ko01000 Bacteria 1NS3T@1224,2KMGF@206350,2VIB1@28216,COG0243@1,COG0243@2 NA|NA|NA C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family MAG.C3.5_02068 1132855.KB913035_gene2509 5.9e-44 183.7 Nitrosomonadales sspB GO:0000502,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008150,GO:0009376,GO:0009893,GO:0009894,GO:0009896,GO:0010604,GO:0019222,GO:0019899,GO:0031597,GO:0032781,GO:0032991,GO:0042176,GO:0042802,GO:0042803,GO:0043085,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043462,GO:0044093,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0045732,GO:0046983,GO:0048518,GO:0050789,GO:0050790,GO:0051117,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0060255,GO:0065007,GO:0065009,GO:0080090,GO:0097159,GO:1901363,GO:1902494,GO:1904949,GO:1905368,GO:1905369,GO:1990904 ko:K03600,ko:K09985 ko00000,ko03021 Bacteria 1MZ2Q@1224,2KMYV@206350,2VSGG@28216,COG2969@1,COG2969@2 NA|NA|NA S PFAM Stringent starvation protein B MAG.C3.5_02069 582744.Msip34_0285 6.2e-100 370.2 Nitrosomonadales sspA GO:0001000,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0006950,GO:0008150,GO:0009605,GO:0009889,GO:0009891,GO:0009893,GO:0009991,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0019899,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0042594,GO:0043175,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070063,GO:0080090,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 ko:K03599 ko00000,ko02000,ko03021 1.A.12.3.1 Bacteria 1MXJD@1224,2KKGC@206350,2VIAW@28216,COG0625@1,COG0625@2 NA|NA|NA O Belongs to the GST superfamily MAG.C3.5_02070 582744.Msip34_0284 9.4e-95 353.2 Nitrosomonadales petC ko:K00410,ko:K00412,ko:K00413 ko00190,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016 M00151,M00152 ko00000,ko00001,ko00002,ko03029 iIT341.HP1538 Bacteria 1QFU2@1224,2KMIM@206350,2VIR6@28216,COG2857@1,COG2857@2 NA|NA|NA C PFAM Cytochrome C1 MAG.C3.5_02071 582744.Msip34_0283 7.1e-226 789.6 Nitrosomonadales petB ko:K00410,ko:K00412,ko:K02635,ko:K02637 ko00190,ko00195,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map00195,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016 M00151,M00152,M00162 ko00000,ko00001,ko00002,ko00194,ko03029 Bacteria 1MV97@1224,2KKSW@206350,2VHP5@28216,COG1290@1,COG1290@2 NA|NA|NA C Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis MAG.C3.5_02072 582744.Msip34_0282 4.7e-92 344.0 Nitrosomonadales petA 1.10.2.2 ko:K00411 ko00190,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016 M00151,M00152 ko00000,ko00001,ko00002,ko01000 Bacteria 1RAA2@1224,2KM0P@206350,2VK46@28216,COG0723@1,COG0723@2 NA|NA|NA C Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis MAG.C3.5_02073 666681.M301_0316 1.1e-93 349.7 Nitrosomonadales ybgI GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010212,GO:0042802,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0050896 3.5.4.16 ko:K22391 ko00790,ko01100,map00790,map01100 M00126 R00428,R04639,R05046,R05048 RC00263,RC00294,RC00323,RC00945,RC01188 ko00000,ko00001,ko00002,ko01000 Bacteria 1MVUN@1224,2KKRS@206350,2VIX1@28216,COG0327@1,COG0327@2 NA|NA|NA S NIF3 (NGG1p interacting factor 3) MAG.C3.5_02074 582744.Msip34_0280 9e-172 609.8 Nitrosomonadales degS GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006508,GO:0006515,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0009987,GO:0010033,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030163,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0033554,GO:0035966,GO:0035967,GO:0042221,GO:0042597,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051603,GO:0051716,GO:0051788,GO:0061077,GO:0070011,GO:0070887,GO:0071218,GO:0071310,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.21.107 ko:K04691,ko:K04771,ko:K04772 ko01503,ko02020,map01503,map02020 M00728 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 Bacteria 1MU63@1224,2KKS5@206350,2VJ9G@28216,COG0265@1,COG0265@2 NA|NA|NA O Belongs to the peptidase S1C family MAG.C3.5_02075 582744.Msip34_0278 9.6e-95 353.2 Nitrosomonadales tatC GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0022804,GO:0022857,GO:0022884,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 ko:K03118 ko03060,ko03070,map03060,map03070 M00336 ko00000,ko00001,ko00002,ko02044 2.A.64 Bacteria 1MVAY@1224,2KKP5@206350,2VI2H@28216,COG0805@1,COG0805@2 NA|NA|NA U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides MAG.C3.5_02076 582744.Msip34_0277 9.1e-22 109.8 Nitrosomonadales tatB GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042802,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 ko:K03116,ko:K03117 ko03060,ko03070,map03060,map03070 M00336 ko00000,ko00001,ko00002,ko02044 2.A.64 Bacteria 1N73F@1224,2KN8S@206350,2VVPX@28216,COG1826@1,COG1826@2 NA|NA|NA U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation MAG.C3.5_02077 582744.Msip34_0276 4.7e-18 96.7 Nitrosomonadales tatA GO:0003674,GO:0005215 ko:K03116,ko:K03425 ko03060,ko03070,map03060,map03070 M00336 ko00000,ko00001,ko00002,ko02044 2.A.64 Bacteria 1N6S4@1224,2KN9D@206350,2VVT6@28216,COG1826@1,COG1826@2 NA|NA|NA U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system MAG.C3.5_02078 583345.Mmol_0320 9.7e-50 202.6 Nitrosomonadales hinT GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006522,GO:0006524,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009078,GO:0009080,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019478,GO:0019752,GO:0043436,GO:0043530,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046144,GO:0046395,GO:0046416,GO:0046436,GO:0055130,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.1.1.226,2.1.1.227 ko:K02503,ko:K06442 ko00000,ko01000,ko03009,ko04147 Bacteria 1RDCJ@1224,2KMXF@206350,2VSMS@28216,COG0537@1,COG0537@2 NA|NA|NA FG PFAM histidine triad (HIT) protein MAG.C3.5_02079 1132855.KB913035_gene2520 2.7e-41 174.5 Nitrosomonadales hisE GO:0000105,GO:0000287,GO:0003674,GO:0003824,GO:0004636,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0043167,GO:0043169,GO:0043207,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044403,GO:0044419,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0052803,GO:0071704,GO:0071944,GO:0075136,GO:0075139,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.4.19,3.6.1.31,5.3.1.16 ko:K01523,ko:K01814,ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04035,R04037,R04640 RC00002,RC00945,RC01055 ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS14110,iYO844.BSU34860 Bacteria 1MZEE@1224,2KMX7@206350,2VUN8@28216,COG0140@1,COG0140@2 NA|NA|NA E PFAM phosphoribosyl-ATP pyrophosphohydrolase MAG.C3.5_02080 1236959.BAMT01000006_gene446 1.2e-61 242.3 Nitrosomonadales hisI GO:0000105,GO:0003674,GO:0003824,GO:0004635,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.4.19,3.6.1.31 ko:K01496,ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04035,R04037 RC00002,RC01055 ko00000,ko00001,ko00002,ko01000 iJN746.PP_5014 Bacteria 1MW67@1224,2KMS4@206350,2VR9B@28216,COG0139@1,COG0139@2 NA|NA|NA E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP MAG.C3.5_02081 582744.Msip34_0272 6.8e-123 446.8 Nitrosomonadales hisF GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 ko:K02500 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04558 RC00010,RC01190,RC01943 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUS0@1224,2KM4T@206350,2VHY0@28216,COG0107@1,COG0107@2 NA|NA|NA E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit MAG.C3.5_02082 582744.Msip34_0271 2.5e-127 461.5 Nitrosomonadales hisA GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 ko:K01814 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04640 RC00945 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_0388 Bacteria 1MW6S@1224,2KKGM@206350,2VI38@28216,COG0106@1,COG0106@2 NA|NA|NA E TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase MAG.C3.5_02083 582744.Msip34_0270 3.1e-89 334.7 Nitrosomonadales hisH GO:0000105,GO:0000107,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04558 RC00010,RC01190,RC01943 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU4X@1224,2KKPZ@206350,2VJPI@28216,COG0118@1,COG0118@2 NA|NA|NA E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR MAG.C3.5_02084 582744.Msip34_0269 1.5e-98 365.5 Nitrosomonadales hisB GO:0000105,GO:0003674,GO:0003824,GO:0004401,GO:0004424,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0040007,GO:0042578,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23,2.6.1.9,3.1.3.15,4.2.1.19 ko:K00013,ko:K00817,ko:K01089,ko:K01693 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 M00026 R00694,R00734,R01158,R01163,R03012,R03013,R03243,R03457 RC00006,RC00017,RC00099,RC00242,RC00463,RC00888,RC00932 ko00000,ko00001,ko00002,ko01000,ko01007 iECO111_1330.ECO111_2746,iECS88_1305.ECS88_2121,iJN746.PP_0289,iLJ478.TM1039,iSB619.SA_RS14130,iUMNK88_1353.UMNK88_2570 Bacteria 1MWBS@1224,2KKWP@206350,2VI59@28216,COG0131@1,COG0131@2 NA|NA|NA E PFAM Imidazoleglycerol-phosphate dehydratase MAG.C3.5_02085 583345.Mmol_0313 6.6e-106 390.2 Nitrosomonadales rmpA 4.1.2.43,5.3.1.27 ko:K08093,ko:K13831 ko00030,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00680,map01100,map01120,map01200,map01230 M00345,M00580 R05338,R05339,R09780 RC00377,RC00421,RC00422 ko00000,ko00001,ko00002,ko01000 Bacteria 1R970@1224,2KKJK@206350,2VWTN@28216,COG0269@1,COG0269@2 NA|NA|NA G PFAM Orotidine 5'-phosphate decarboxylase MAG.C3.5_02086 582744.Msip34_0267 6.1e-159 567.0 Nitrosomonadales hisC 2.6.1.9 ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 M00026 R00694,R00734,R03243 RC00006,RC00888 ko00000,ko00001,ko00002,ko01000,ko01007 iJN678.hisC Bacteria 1MW7I@1224,2KM3F@206350,2VHFU@28216,COG0079@1,COG0079@2 NA|NA|NA E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily MAG.C3.5_02087 1132855.KB913035_gene2528 2.4e-213 748.0 Nitrosomonadales hisD GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23,1.1.1.308 ko:K00013,ko:K15509 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R01158,R01163,R03012 RC00099,RC00242,RC00463 ko00000,ko00001,ko00002,ko01000 iYO844.BSU34910 Bacteria 1MUUF@1224,2KM6F@206350,2VJ7K@28216,COG0141@1,COG0141@2 NA|NA|NA E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine MAG.C3.5_02088 265072.Mfla_0247 7.1e-102 376.7 Nitrosomonadales hisG GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 ko:K00765,ko:K02502 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R01071 RC02819,RC03200 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUCY@1224,2KM3E@206350,2VIF9@28216,COG0040@1,COG0040@2 NA|NA|NA E Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity MAG.C3.5_02089 583345.Mmol_0309 1.6e-190 672.2 Nitrosomonadales murA GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008760,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016740,GO:0016765,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.5.1.7 ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 R00660 RC00350 ko00000,ko00001,ko01000,ko01011 Bacteria 1MUH7@1224,2KKQE@206350,2VHZN@28216,COG0766@1,COG0766@2 NA|NA|NA M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine MAG.C3.5_02090 1236959.BAMT01000006_gene435 9.6e-44 182.6 Nitrosomonadales grxD ko:K07390 ko00000,ko03029,ko03110 Bacteria 1MZ4V@1224,2KN32@206350,2VSCX@28216,COG0278@1,COG0278@2 NA|NA|NA C Glutaredoxin MAG.C3.5_02091 582744.Msip34_0262 5.6e-31 139.8 Nitrosomonadales yrbA GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051536,GO:0051537,GO:0051540 Bacteria 1MZCZ@1224,2KN4E@206350,2VU0K@28216,COG5007@1,COG5007@2 NA|NA|NA K Belongs to the BolA IbaG family MAG.C3.5_02092 582744.Msip34_0261 9.3e-109 399.8 Nitrosomonadales yadH ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1MUH1@1224,2KKDW@206350,2VH42@28216,COG0842@1,COG0842@2 NA|NA|NA V PFAM ABC-2 type transporter MAG.C3.5_02093 1236959.BAMT01000006_gene432 1.5e-134 485.7 Nitrosomonadales yadG ko:K01990,ko:K09695 ko02010,map02010 M00252,M00254 ko00000,ko00001,ko00002,ko02000 3.A.1,3.A.1.102 Bacteria 1MUW7@1224,2KKJG@206350,2VI81@28216,COG1131@1,COG1131@2 NA|NA|NA V PFAM ABC transporter MAG.C3.5_02094 1236959.BAMT01000006_gene431 3.7e-21 107.5 Nitrosomonadales ko:K07122 ko02010,map02010 M00210 ko00000,ko00001,ko00002,ko02000 3.A.1.27.3 Bacteria 1NGIE@1224,2KNBR@206350,2W81J@28216,COG3113@1,COG3113@2 NA|NA|NA S STAS domain MAG.C3.5_02095 582744.Msip34_0258 6.6e-81 307.0 Nitrosomonadales mlaC GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0008150,GO:0009987,GO:0010876,GO:0015711,GO:0015748,GO:0015914,GO:0016043,GO:0030288,GO:0030313,GO:0031975,GO:0033036,GO:0042597,GO:0044464,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071840,GO:0120009,GO:0120010 ko:K07323 ko02010,map02010 M00210 ko00000,ko00001,ko00002,ko02000 3.A.1.27.3 Bacteria 1NKFA@1224,2KME2@206350,2VR85@28216,COG2854@1,COG2854@2 NA|NA|NA Q PFAM toluene tolerance MAG.C3.5_02096 582744.Msip34_0257 1.9e-67 261.9 Nitrosomonadales mlaD GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008289,GO:0016020,GO:0016021,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0042597,GO:0043167,GO:0043168,GO:0044425,GO:0044459,GO:0044464,GO:0071944 ko:K02067 ko02010,map02010 M00210,M00669,M00670 ko00000,ko00001,ko00002,ko02000 3.A.1.27 Bacteria 1NCUG@1224,2KMJU@206350,2VRKR@28216,COG1463@1,COG1463@2 NA|NA|NA Q PFAM Mammalian cell entry related domain protein MAG.C3.5_02097 582744.Msip34_0256 1.1e-125 456.1 Nitrosomonadales mlaE GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02066 ko02010,map02010 M00210,M00669,M00670 ko00000,ko00001,ko00002,ko02000 3.A.1.27 Bacteria 1MVPN@1224,2KKIQ@206350,2VI5T@28216,COG0767@1,COG0767@2 NA|NA|NA Q Permease MlaE MAG.C3.5_02098 582744.Msip34_0255 3.6e-135 487.6 Nitrosomonadales mlaF GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0008144,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K02065 ko02010,map02010 M00210,M00669,M00670 ko00000,ko00001,ko00002,ko02000 3.A.1.27 Bacteria 1MUSD@1224,2KKNS@206350,2VJIA@28216,COG1127@1,COG1127@2 NA|NA|NA Q PFAM ABC transporter MAG.C3.5_02099 1502770.JQMG01000001_gene1109 3.2e-70 271.6 Nitrosomonadales ko:K02456 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1REMT@1224,2KMRF@206350,2VR8U@28216,COG2165@1,COG2165@2 NA|NA|NA NU Prokaryotic N-terminal methylation motif MAG.C3.5_02100 265072.Mfla_0235 8.3e-190 670.2 Nitrosomonadales regB 2.7.13.3 ko:K07717,ko:K15011 ko02020,map02020 M00518,M00523 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1R49A@1224,2KMC6@206350,2VKU5@28216,COG0642@1,COG0642@2 NA|NA|NA T Histidine kinase-like ATPases MAG.C3.5_02101 582744.Msip34_0252 4e-180 637.5 Nitrosomonadales ccsA GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008152,GO:0015886,GO:0016020,GO:0044464,GO:0051179,GO:0051181,GO:0051234,GO:0055114,GO:0071702,GO:0071705,GO:0071944,GO:1901678 Bacteria 1RG6M@1224,2KKDM@206350,2VI4N@28216,COG0755@1,COG0755@2 NA|NA|NA O TIGRFAM cytochrome c-type biogenesis protein CcsB MAG.C3.5_02102 582744.Msip34_0251 2.3e-252 878.2 Nitrosomonadales ccs1 ko:K07399 ko00000 Bacteria 1N6XE@1224,2KKXD@206350,2VJK9@28216,COG1333@1,COG1333@2 NA|NA|NA O ResB-like family MAG.C3.5_02103 582744.Msip34_0250 1.4e-83 315.8 Nitrosomonadales cyc Bacteria 1N2NB@1224,2KP5G@206350,2VQNZ@28216,COG2863@1,COG2863@2 NA|NA|NA C Cytochrome C oxidase, cbb3-type, subunit III MAG.C3.5_02104 582744.Msip34_0249 2.8e-91 341.7 Nitrosomonadales engB GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K03978 ko00000,ko03036 Bacteria 1MY3Z@1224,2KKZ0@206350,2VIKF@28216,COG0218@1,COG0218@2 NA|NA|NA D Necessary for normal cell division and for the maintenance of normal septation MAG.C3.5_02105 265072.Mfla_0231 5.6e-100 370.5 Nitrosomonadales trmB GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0040007,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.297,2.1.1.33,2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 ko:K02493,ko:K02527,ko:K03439 ko00540,ko01100,map00540,map01100 M00060,M00080 R04658,R05074,R09763,R10806 RC00003,RC00009,RC00077,RC00247,RC03279 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005,ko03012,ko03016 GT30 Bacteria 1MUWJ@1224,2KM9A@206350,2VJN2@28216,COG0220@1,COG0220@2 NA|NA|NA J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA MAG.C3.5_02106 582744.Msip34_0247 6.1e-128 464.2 Nitrosomonadales Bacteria 1N3CJ@1224,2KKBV@206350,2VHBE@28216,COG1565@1,COG1565@2 NA|NA|NA S Putative S-adenosyl-L-methionine-dependent methyltransferase MAG.C3.5_02107 582744.Msip34_0246 1.2e-113 416.0 Nitrosomonadales Bacteria 1MUUV@1224,2KKSM@206350,2VK0U@28216,COG1028@1,COG1028@2 NA|NA|NA IQ PFAM short-chain dehydrogenase reductase SDR MAG.C3.5_02108 583345.Mmol_0290 3.6e-152 544.3 Nitrosomonadales ttcA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0016783,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:0090304,GO:1901360 6.3.4.19 ko:K04075,ko:K14058 R09597 RC02633,RC02634 ko00000,ko01000,ko03016 Bacteria 1MW5Q@1224,2KM05@206350,2VHWH@28216,COG0037@1,COG0037@2 NA|NA|NA D Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system MAG.C3.5_02109 582744.Msip34_0244 0.0 1422.9 Nitrosomonadales topA GO:0000287,GO:0003674,GO:0003824,GO:0003916,GO:0003917,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0009892,GO:0010605,GO:0016020,GO:0016853,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031324,GO:0032069,GO:0032074,GO:0040007,GO:0043086,GO:0043167,GO:0043169,GO:0044092,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0046872,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0060255,GO:0060700,GO:0060701,GO:0065007,GO:0065009,GO:0071944,GO:0080090,GO:0140097 5.99.1.2 ko:K03168 ko00000,ko01000,ko03032,ko03400 Bacteria 1MUFZ@1224,2KKIF@206350,2VHUF@28216,COG0550@1,COG0550@2,COG1754@1,COG1754@2 NA|NA|NA L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone MAG.C3.5_02110 582744.Msip34_0243 1.7e-123 449.1 Nitrosomonadales pbpG GO:0003674,GO:0003824,GO:0004175,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.16.4 ko:K07258,ko:K07262 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011 Bacteria 1MWZA@1224,2KMAQ@206350,2VH1S@28216,COG1686@1,COG1686@2 NA|NA|NA M Belongs to the peptidase S11 family MAG.C3.5_02111 582744.Msip34_0242 9.3e-41 172.9 Nitrosomonadales gcvH ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 M00532 R01221 RC00022,RC02834 ko00000,ko00001,ko00002 Bacteria 1RGV7@1224,2KMXJ@206350,2VSD7@28216,COG0509@1,COG0509@2 NA|NA|NA E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein MAG.C3.5_02113 265072.Mfla_0223 1.2e-49 202.6 Nitrosomonadales holC GO:0005575,GO:0005622,GO:0005623,GO:0006275,GO:0008150,GO:0009314,GO:0009360,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010556,GO:0010557,GO:0010604,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032298,GO:0032991,GO:0042575,GO:0043846,GO:0043847,GO:0044424,GO:0044464,GO:0045740,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0060255,GO:0061695,GO:0065007,GO:0080090,GO:0090329,GO:1902494,GO:1990234,GO:2000105,GO:2000112 2.7.7.7 ko:K02339 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1MZ3V@1224,2KN6Q@206350,2VTYC@28216,COG2927@1,COG2927@2 NA|NA|NA L PFAM DNA polymerase III chi subunit HolC MAG.C3.5_02114 582744.Msip34_0239 3.6e-221 774.2 Nitrosomonadales pepA GO:0001073,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006351,GO:0006355,GO:0006508,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009056,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016787,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019904,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042150,GO:0043170,GO:0043171,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043244,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0097718,GO:0140096,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1903506,GO:2000112,GO:2001141 3.4.11.1 ko:K01255 ko00480,ko01100,map00480,map01100 R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 Bacteria 1MUF9@1224,2KKR5@206350,2VH79@28216,COG0260@1,COG0260@2 NA|NA|NA E Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides MAG.C3.5_02115 582744.Msip34_0238 2.3e-153 548.5 Nitrosomonadales lptF ko:K07091,ko:K11720 ko02010,map02010 M00320 ko00000,ko00001,ko00002,ko02000 1.B.42.1 Bacteria 1MUF2@1224,2KKPN@206350,2VH9C@28216,COG0795@1,COG0795@2 NA|NA|NA S permease YjgP YjgQ family MAG.C3.5_02116 582744.Msip34_0237 9.6e-152 543.1 Nitrosomonadales lptG ko:K11720 ko02010,map02010 M00320 ko00000,ko00001,ko00002,ko02000 1.B.42.1 Bacteria 1MVW3@1224,2KM5V@206350,2VHA1@28216,COG0795@1,COG0795@2 NA|NA|NA S permease YjgP YjgQ family MAG.C3.5_02117 582744.Msip34_0236 3.2e-34 151.4 Nitrosomonadales VP2641 Bacteria 1REEC@1224,2KP96@206350,2VRE0@28216,COG1714@1,COG1714@2 NA|NA|NA S PFAM RDD domain containing protein MAG.C3.5_02119 1236959.BAMT01000006_gene403 6.9e-17 93.6 Nitrosomonadales Bacteria 1NIWB@1224,2ESPS@1,2KNAU@206350,2W81E@28216,33K88@2 NA|NA|NA S Protein of unknown function (DUF3619) MAG.C3.5_02120 1165096.ARWF01000001_gene1307 3.4e-74 284.6 Nitrosomonadales sigE ko:K03088 ko00000,ko03021 Bacteria 1R9WC@1224,2KKU3@206350,2VQ28@28216,COG1595@1,COG1595@2 NA|NA|NA K TIGRFAM RNA polymerase sigma factor, sigma-70 family MAG.C3.5_02121 1236959.BAMT01000006_gene400 2.4e-164 585.5 Nitrosomonadales pilS 2.7.13.3 ko:K02668 ko02020,map02020 M00501 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035 Bacteria 1QU7R@1224,2KM2K@206350,2VICU@28216,COG4191@1,COG4191@2 NA|NA|NA T His Kinase A (phosphoacceptor) domain MAG.C3.5_02122 582744.Msip34_0575 2.5e-110 404.8 Nitrosomonadales adk GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.4.3 ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 M00049 R00127,R01547,R11319 RC00002 ko00000,ko00001,ko00002,ko01000,ko04147 iJN746.PP_1506 Bacteria 1MXCZ@1224,2KKQZ@206350,2VH1C@28216,COG0563@1,COG0563@2 NA|NA|NA F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism MAG.C3.5_02123 1122236.KB905142_gene447 1.3e-113 416.0 Nitrosomonadales ksgA GO:0000028,GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003729,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0031167,GO:0032259,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070475,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140102,GO:1901360,GO:1901363 2.1.1.182 ko:K02528 R10716 RC00003,RC03257 ko00000,ko01000,ko03009 Bacteria 1MVNU@1224,2KKX9@206350,2VH15@28216,COG0030@1,COG0030@2 NA|NA|NA J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits MAG.C3.5_02124 1349767.GJA_597 9e-121 441.8 Oxalobacteraceae Bacteria 1NRP8@1224,2VGZQ@28216,472D0@75682,COG0642@1,COG2205@2,COG5002@1,COG5002@2 NA|NA|NA T PhoQ Sensor MAG.C3.5_02125 261292.Nit79A3_3382 7.2e-90 337.8 Nitrosomonadales vieA Bacteria 1NC9X@1224,2WGSU@28216,374RA@32003,COG0784@1,COG0784@2,COG2200@1,COG2200@2 NA|NA|NA T Putative diguanylate phosphodiesterase MAG.C3.5_02126 582744.Msip34_0577 1.6e-110 406.0 Nitrosomonadales pdxA GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008614,GO:0008615,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0036094,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046184,GO:0046483,GO:0046872,GO:0046914,GO:0048037,GO:0050570,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.262,1.1.1.408,1.1.1.409 ko:K00097,ko:K22024 ko00750,ko01100,map00750,map01100 M00124 R05681,R05837,R07406 RC00089,RC00675,RC01475 ko00000,ko00001,ko00002,ko01000 iECO111_1330.ECO111_0056 Bacteria 1MX5W@1224,2KKW8@206350,2VJN0@28216,COG1995@1,COG1995@2 NA|NA|NA H Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) MAG.C3.5_02127 1236959.BAMT01000002_gene2249 7.8e-180 636.7 Nitrosomonadales surA GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006457,GO:0006458,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0022607,GO:0030288,GO:0030313,GO:0031647,GO:0031975,GO:0033218,GO:0036211,GO:0042277,GO:0042597,GO:0043163,GO:0043165,GO:0043170,GO:0043412,GO:0044085,GO:0044091,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0044764,GO:0045229,GO:0050821,GO:0051082,GO:0051084,GO:0051085,GO:0051704,GO:0060274,GO:0061024,GO:0061077,GO:0065007,GO:0065008,GO:0071704,GO:0071709,GO:0071840,GO:0140096,GO:1901564 5.2.1.8 ko:K03769,ko:K03771 ko00000,ko01000,ko03110 Bacteria 1MVB3@1224,2KKDR@206350,2VHHS@28216,COG0760@1,COG0760@2 NA|NA|NA M Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation MAG.C3.5_02128 582744.Msip34_0579 0.0 1082.0 Nitrosomonadales lptD GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0008150,GO:0008509,GO:0008514,GO:0008643,GO:0009279,GO:0009636,GO:0009987,GO:0010876,GO:0015075,GO:0015136,GO:0015144,GO:0015157,GO:0015267,GO:0015288,GO:0015318,GO:0015478,GO:0015711,GO:0015739,GO:0015772,GO:0015849,GO:0015920,GO:0016020,GO:0016021,GO:0016043,GO:0019867,GO:0022607,GO:0022803,GO:0022829,GO:0022857,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031975,GO:0033036,GO:0034219,GO:0034220,GO:0042221,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045203,GO:0045229,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0098656,GO:1901264,GO:1901505,GO:1903825,GO:1905039 ko:K04744,ko:K22110 ko00000,ko02000 1.B.35.1,1.B.35.2,1.B.42.1 iG2583_1286.G2583_0058,ic_1306.c5389 Bacteria 1MUJC@1224,2KM3D@206350,2VIJ7@28216,COG1452@1,COG1452@2 NA|NA|NA M Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane MAG.C3.5_02129 1101195.Meth11DRAFT_0656 4.9e-134 484.2 Nitrosomonadales GO:0000166,GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0006022,GO:0006040,GO:0006082,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0019200,GO:0019752,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046835,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.1.221 ko:K07102 ko00520,ko01100,map00520,map01100 R08968,R11024 RC00002,RC00078 ko00000,ko00001,ko01000 Bacteria 1MXCH@1224,2KM5S@206350,2VHBC@28216,COG3178@1,COG3178@2 NA|NA|NA S Phosphotransferase enzyme family MAG.C3.5_02130 666681.M301_0597 9.2e-84 316.6 Nitrosomonadales rmlA GO:0000166,GO:0000270,GO:0000287,GO:0001882,GO:0001884,GO:0002134,GO:0003674,GO:0003824,GO:0005488,GO:0006022,GO:0006040,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0019103,GO:0019752,GO:0030203,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044281,GO:0046872,GO:0070569,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.7.13,2.7.7.24,2.7.7.99 ko:K00966,ko:K00973,ko:K00992 ko00051,ko00520,ko00521,ko00523,ko00525,ko01100,ko01110,ko01130,map00051,map00520,map00521,map00523,map00525,map01100,map01110,map01130 M00114,M00361,M00362,M00793 R00885,R02328,R11025 RC00002 ko00000,ko00001,ko00002,ko01000 Bacteria 1R9ZD@1224,2KMGT@206350,2VJUN@28216,COG1208@1,COG1208@2 NA|NA|NA JM PFAM Nucleotidyl transferase MAG.C3.5_02131 666681.M301_0598 1.6e-188 665.6 Nitrosomonadales pepP 3.4.11.9 ko:K01262 ko00000,ko01000,ko01002 Bacteria 1MUZS@1224,2KKCQ@206350,2VHQI@28216,COG0006@1,COG0006@2 NA|NA|NA E peptidase M24B X-Pro dipeptidase aminopeptidase domain protein MAG.C3.5_02132 265072.Mfla_2145 2.9e-146 525.0 Nitrosomonadales ubiH GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008681,GO:0009058,GO:0009108,GO:0009314,GO:0009416,GO:0009628,GO:0009987,GO:0016491,GO:0016705,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0050896,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:1901576,GO:1901661,GO:1901663 ko:K03184,ko:K03185,ko:K18800 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00117 R04987,R04989,R06146,R08768,R08773,R08775 RC00046,RC01254,RC02670 ko00000,ko00001,ko00002,ko01000 iB21_1397.B21_02702,iECBD_1354.ECBD_0830,iECB_1328.ECB_02739,iECD_1391.ECD_02739,iEcHS_1320.EcHS_A3066 Bacteria 1MU6I@1224,2KKTI@206350,2VKV7@28216,COG0654@1,COG0654@2 NA|NA|NA CH Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 family MAG.C3.5_02133 582744.Msip34_0584 5.9e-102 377.9 Nitrosomonadales ubiH ko:K03185 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00117 R04989,R08773 RC02670 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU6I@1224,2KM0M@206350,2VIPS@28216,COG0654@1,COG0654@2 NA|NA|NA CH TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 family MAG.C3.5_02134 1236959.BAMT01000002_gene2258 1.6e-97 362.5 Nitrosomonadales 5.3.4.1 ko:K03981 ko00000,ko01000,ko02044,ko03110 3.A.7.11.1 Bacteria 1RD39@1224,2KKTR@206350,2VIHV@28216,COG1651@1,COG1651@2 NA|NA|NA O Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process MAG.C3.5_02135 265072.Mfla_2142 7.4e-193 679.9 Nitrosomonadales pilC GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008150,GO:0009297,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0016020,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0032940,GO:0033036,GO:0042886,GO:0043711,GO:0044085,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0098776 ko:K02455,ko:K02653 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02035,ko02044 3.A.15,3.A.15.2 Bacteria 1MV4U@1224,2KKCS@206350,2VHPE@28216,COG1459@1,COG1459@2 NA|NA|NA NU PFAM type II secretion system MAG.C3.5_02136 582744.Msip34_0587 3.5e-265 920.6 Nitrosomonadales pilB ko:K02652 ko00000,ko02035,ko02044 3.A.15.2 Bacteria 1MU7V@1224,2KKYV@206350,2VHQ1@28216,COG2804@1,COG2804@2 NA|NA|NA NU TIGRFAM type IV-A pilus assembly ATPase PilB MAG.C3.5_02137 1236959.BAMT01000002_gene2261 2.7e-31 140.6 Nitrosomonadales scoF ko:K03704 ko00000,ko03000 Bacteria 1N6Q5@1224,2KN49@206350,2VVTG@28216,COG1278@1,COG1278@2 NA|NA|NA K Cold shock protein MAG.C3.5_02138 582744.Msip34_0589 2e-217 761.5 Nitrosomonadales icd GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.42 ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 M00009,M00010,M00173,M00740 R00267,R00268,R01899 RC00001,RC00084,RC00114,RC00626,RC02801 br01601,ko00000,ko00001,ko00002,ko01000 iJN746.PP_4011 Bacteria 1MW3J@1224,2KKC5@206350,2VHVD@28216,COG0538@1,COG0538@2 NA|NA|NA C PFAM isocitrate isopropylmalate dehydrogenase MAG.C3.5_02139 582744.Msip34_0590 3.8e-77 294.3 Nitrosomonadales rluE GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.19,5.4.99.20,5.4.99.22 ko:K06178,ko:K06181,ko:K06183 ko00000,ko01000,ko03009 Bacteria 1R9VV@1224,2KKDS@206350,2VQAQ@28216,COG1187@1,COG1187@2 NA|NA|NA J Belongs to the pseudouridine synthase RsuA family MAG.C3.5_02140 1101195.Meth11DRAFT_0668 2.1e-94 352.1 Nitrosomonadales Bacteria 1MUDH@1224,2KKPM@206350,2VJEI@28216,COG0518@1,COG0518@2 NA|NA|NA F PFAM Glutamine amidotransferase class-I MAG.C3.5_02141 1101195.Meth11DRAFT_0669 6.5e-188 663.3 Nitrosomonadales aroC GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R01714 RC00586 ko00000,ko00001,ko00002,ko01000 iE2348C_1286.E2348C_2469,iEC55989_1330.EC55989_2573,iECO103_1326.ECO103_2794,iECO111_1330.ECO111_3077,iECO26_1355.ECO26_3317,iECSE_1348.ECSE_2638,iECW_1372.ECW_m2518,iEKO11_1354.EKO11_1436,iIT341.HP0663,iSSON_1240.SSON_2387,iUMNK88_1353.UMNK88_2882,iWFL_1372.ECW_m2518 Bacteria 1MU98@1224,2KKJ8@206350,2VJA4@28216,COG0082@1,COG0082@2 NA|NA|NA E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system MAG.C3.5_02142 582744.Msip34_0593 6.9e-164 583.6 Nitrosomonadales ko:K05820,ko:K08218 ko01501,map01501 M00628 ko00000,ko00001,ko00002,ko02000 2.A.1.25,2.A.1.27 Bacteria 1QY3E@1224,2KPAA@206350,2WHA2@28216,COG2211@1,COG2211@2 NA|NA|NA G Nucleoside H+ symporter MAG.C3.5_02143 582744.Msip34_0594 1e-58 233.4 Nitrosomonadales ko:K06985 ko04112,map04112 ko00000,ko00001 Bacteria 1N2PE@1224,2KMNB@206350,2VS6Z@28216,COG3577@1,COG3577@2 NA|NA|NA S gag-polyprotein putative aspartyl protease MAG.C3.5_02144 582744.Msip34_0595 3.2e-131 474.6 Nitrosomonadales folE2 3.5.4.16 ko:K09007 ko00790,ko01100,map00790,map01100 M00126 R00428,R04639,R05046,R05048 RC00263,RC00294,RC00323,RC00945,RC01188 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV1B@1224,2KKMR@206350,2VIC9@28216,COG1469@1,COG1469@2 NA|NA|NA S Converts GTP to 7,8-dihydroneopterin triphosphate MAG.C3.5_02145 582744.Msip34_0596 1.3e-302 1045.0 Nitrosomonadales dxs GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008144,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0008661,GO:0009058,GO:0009240,GO:0009987,GO:0016740,GO:0016744,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0019842,GO:0030145,GO:0030975,GO:0032787,GO:0036094,GO:0040007,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901363,GO:1901576,GO:1901681 2.2.1.7 ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 M00096 R05636 RC00032 ko00000,ko00001,ko00002,ko01000 Bacteria 1MUSJ@1224,2KKBR@206350,2VHXG@28216,COG1154@1,COG1154@2 NA|NA|NA H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) MAG.C3.5_02146 582744.Msip34_0597 3.6e-120 438.0 Nitrosomonadales ispA GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0071704,GO:1901576 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 ko:K00795,ko:K02523,ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00364,M00366 R01658,R02003,R02061,R09248 RC00279 ko00000,ko00001,ko00002,ko01000,ko01006 Bacteria 1MWNG@1224,2KKBC@206350,2VHQV@28216,COG0142@1,COG0142@2 NA|NA|NA H Belongs to the FPP GGPP synthase family MAG.C3.5_02147 265072.Mfla_2131 3.4e-15 87.4 Nitrosomonadales xseB GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008855,GO:0009056,GO:0009057,GO:0009318,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575,GO:1902494 3.1.11.6 ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 1PTYP@1224,2KN7U@206350,2VVQV@28216,COG1722@1,COG1722@2 NA|NA|NA L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides MAG.C3.5_02148 1101195.Meth11DRAFT_0676 1.1e-63 250.0 Nitrosomonadales estB ko:K06999 ko00000 Bacteria 1RA02@1224,2KMM3@206350,2VJ6G@28216,COG0400@1,COG0400@2 NA|NA|NA S PFAM phospholipase Carboxylesterase MAG.C3.5_02149 580332.Slit_0533 1e-240 839.7 Betaproteobacteria cyaA 4.6.1.1 ko:K01768 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000 Bacteria 1MV1V@1224,2VJ72@28216,COG2114@1,COG2114@2,COG4252@1,COG4252@2 NA|NA|NA T Adenylyl cyclase class-3 4 guanylyl cyclase MAG.C3.5_02150 666681.M301_0620 1.2e-87 329.7 Nitrosomonadales 3.1.26.11,3.1.4.17 ko:K00784,ko:K01120 ko00230,ko03013,map00230,map03013 R00191,R01234 RC00296 ko00000,ko00001,ko01000,ko03016 Bacteria 1QU4B@1224,2KMHV@206350,2VH0D@28216,COG1234@1,COG1234@2 NA|NA|NA S cAMP phosphodiesterases class-II MAG.C3.5_02151 666681.M301_0621 1.8e-121 442.6 Nitrosomonadales Bacteria 1R9Q1@1224,2KNP5@206350,2VQGZ@28216,COG0607@1,COG0607@2,COG2905@1,COG2905@2 NA|NA|NA PT Cyclic nucleotide-monophosphate binding domain MAG.C3.5_02154 582744.Msip34_1844 3.6e-20 104.0 Nitrosomonadales trmJ GO:0001510,GO:0002128,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016427,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0052665,GO:0052666,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.200,3.5.1.19,6.1.1.16 ko:K01883,ko:K02533,ko:K08281,ko:K15396 ko00760,ko00970,ko01100,map00760,map00970,map01100 M00359,M00360 R01268,R03650 RC00055,RC00100,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1N47Y@1224,2KM4J@206350,2VI2D@28216,COG0565@1,COG0565@2 NA|NA|NA J Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA MAG.C3.5_02155 582744.Msip34_1845 2.3e-120 438.3 Nitrosomonadales cysE GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009001,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016407,GO:0016412,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.30 ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 M00021 R00586 RC00004,RC00041 ko00000,ko00001,ko00002,ko01000 iJN746.PP_0840 Bacteria 1MVFX@1224,2KKVB@206350,2VH8C@28216,COG1045@1,COG1045@2 NA|NA|NA E TIGRFAM serine O-acetyltransferase MAG.C3.5_02156 1132855.KB913035_gene973 3.7e-60 237.7 Nitrosomonadales iscR 2.8.1.7 ko:K04487,ko:K13643 ko00730,ko01100,ko04122,map00730,map01100,map04122 R07460,R11528,R11529 RC01789,RC02313 ko00000,ko00001,ko01000,ko02048,ko03000,ko03016,ko03029 Bacteria 1RDA4@1224,2KMV0@206350,2VRGK@28216,COG1959@1,COG1959@2 NA|NA|NA K TIGRFAM transcriptional regulator, Rrf2 family MAG.C3.5_02157 1236959.BAMT01000001_gene1093 1.1e-140 506.5 Nitrosomonadales 2.8.1.7 ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 R07460,R11528,R11529 RC01789,RC02313 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Bacteria 1MU1C@1224,2KKUC@206350,2VH91@28216,COG1104@1,COG1104@2 NA|NA|NA E Beta-eliminating lyase MAG.C3.5_02158 582744.Msip34_1848 7.9e-219 766.1 Nitrosomonadales iscS GO:0001522,GO:0003674,GO:0003824,GO:0004123,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006790,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009000,GO:0009058,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016226,GO:0016740,GO:0016769,GO:0016782,GO:0016783,GO:0016829,GO:0016846,GO:0018130,GO:0018131,GO:0019842,GO:0022607,GO:0030170,GO:0031071,GO:0031119,GO:0031163,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046484,GO:0048037,GO:0050662,GO:0051186,GO:0070279,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097163,GO:0140104,GO:1901360,GO:1901363 2.8.1.7 ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 R07460,R11528,R11529 RC01789,RC02313 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 iPC815.YPO2896,iYL1228.KPN_02862 Bacteria 1MU1C@1224,2KM7T@206350,2VH91@28216,COG1104@1,COG1104@2 NA|NA|NA E Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins MAG.C3.5_02159 1101195.Meth11DRAFT_1877 2.6e-62 244.6 Nitrosomonadales iscU ko:K04488 ko00000 Bacteria 1RD5K@1224,2KMMJ@206350,2VQ2I@28216,COG0822@1,COG0822@2 NA|NA|NA C A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters MAG.C3.5_02160 1132855.KB913035_gene969 3.1e-53 214.2 Nitrosomonadales iscA GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0016530,GO:0019538,GO:0022607,GO:0031163,GO:0034986,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051540,GO:0051604,GO:0071704,GO:0071840,GO:0097428,GO:0140104,GO:1901564 ko:K13628 ko00000,ko03016 iAPECO1_1312.APECO1_3997,iB21_1397.B21_02384,iBWG_1329.BWG_2292,iE2348C_1286.E2348C_2811,iEC042_1314.EC042_2732,iEC55989_1330.EC55989_2813,iECABU_c1320.ECABU_c28340,iECBD_1354.ECBD_1156,iECB_1328.ECB_02420,iECDH10B_1368.ECDH10B_2695,iECD_1391.ECD_02420,iECED1_1282.ECED1_2959,iECIAI1_1343.ECIAI1_2580,iECIAI39_1322.ECIAI39_2729,iECNA114_1301.ECNA114_2607,iECO103_1326.ECO103_3045,iECO111_1330.ECO111_3252,iECO26_1355.ECO26_3575,iECOK1_1307.ECOK1_2877,iECP_1309.ECP_2533,iECS88_1305.ECS88_2704,iECSE_1348.ECSE_2814,iECSF_1327.ECSF_2372,iECSP_1301.ECSP_3472,iECUMN_1333.ECUMN_2848,iECW_1372.ECW_m2754,iECs_1301.ECs3394,iEKO11_1354.EKO11_1205,iETEC_1333.ETEC_2685,iEcDH1_1363.EcDH1_1140,iEcSMS35_1347.EcSMS35_2681,iEcolC_1368.EcolC_1149,iG2583_1286.G2583_3058,iJO1366.b2528,iLF82_1304.LF82_1120,iNRG857_1313.NRG857_12580,iSBO_1134.SBO_2552,iSDY_1059.SDY_2724,iSF_1195.SF2575,iSSON_1240.SSON_2610,iS_1188.S2747,iUMN146_1321.UM146_04060,iUMNK88_1353.UMNK88_3181,iWFL_1372.ECW_m2754,iY75_1357.Y75_RS13195,iZ_1308.Z3795,ic_1306.c3053 Bacteria 1RH6T@1224,2KMUB@206350,2VSKY@28216,COG0316@1,COG0316@2 NA|NA|NA S TIGRFAM iron-sulfur cluster assembly protein IscA MAG.C3.5_02161 59538.XP_005974535.1 9.7e-49 199.9 Metazoa GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 ko:K04082,ko:K15151 ko00000,ko03021,ko03029,ko03110 Metazoa 3A0FM@33154,3BM4M@33208,COG1076@1,KOG3192@2759 NA|NA|NA O iron-sulfur cluster co-chaperone MAG.C3.5_02162 265072.Mfla_1116 4.6e-75 287.7 Nitrosomonadales ispD GO:0000166,GO:0000287,GO:0001882,GO:0001884,GO:0002135,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016020,GO:0016114,GO:0016740,GO:0016772,GO:0016779,GO:0019103,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0032787,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044464,GO:0046490,GO:0046872,GO:0046914,GO:0050518,GO:0051483,GO:0051484,GO:0070567,GO:0071704,GO:0071944,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.405,2.7.7.40,2.7.7.60,4.6.1.12 ko:K00991,ko:K12506,ko:K21030,ko:K21681 ko00040,ko00900,ko01100,ko01110,ko01130,map00040,map00900,map01100,map01110,map01130 M00096 R01525,R02921,R05633,R05637 RC00002,RC00089,RC01440 ko00000,ko00001,ko00002,ko01000 iHN637.CLJU_RS20335 Bacteria 1MY3B@1224,2KMKI@206350,2VMD6@28216,COG1211@1,COG1211@2 NA|NA|NA I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) MAG.C3.5_02163 1236959.BAMT01000004_gene972 1.6e-16 91.7 Nitrosomonadales fdsD 1.17.1.9 ko:K00126 ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200 R00519 RC02796 ko00000,ko00001,ko01000 Bacteria 1N7UZ@1224,2E4CR@1,2KN8K@206350,2VVR1@28216,32Z86@2 NA|NA|NA S NADH-dependant formate dehydrogenase delta subunit FdsD MAG.C3.5_02164 582744.Msip34_1180 5.8e-88 330.9 Nitrosomonadales fdhD GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0043085,GO:0043546,GO:0044093,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050662,GO:0050790,GO:0065007,GO:0065009,GO:0097159,GO:0097163,GO:0140104,GO:1901363 ko:K02379 ko00000 Bacteria 1NRU0@1224,2KM64@206350,2VQ5Z@28216,COG1526@1,COG1526@2 NA|NA|NA C Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH MAG.C3.5_02165 582744.Msip34_1179 0.0 1673.3 Nitrosomonadales fdsA 1.17.1.10,1.17.1.9 ko:K00123,ko:K05299 ko00630,ko00680,ko00720,ko01100,ko01120,ko01200,map00630,map00680,map00720,map01100,map01120,map01200 M00377 R00134,R00519 RC02796 ko00000,ko00001,ko00002,ko01000 Bacteria 1QTZB@1224,2KKYD@206350,2VP2Q@28216,COG3383@1,COG3383@2 NA|NA|NA C TIGRFAM formate dehydrogenase, alpha subunit MAG.C3.5_02166 1101195.Meth11DRAFT_2316 1.7e-253 881.7 Nitrosomonadales fdsB 1.6.5.3 ko:K00124,ko:K00335 ko00190,ko00630,ko00680,ko01100,ko01120,ko01200,map00190,map00630,map00680,map01100,map01120,map01200 M00144 R00519,R11945 RC00061,RC02796 ko00000,ko00001,ko00002,ko01000 3.D.1 Bacteria 1MV8F@1224,2KKNQ@206350,2VIGR@28216,COG1894@1,COG1894@2 NA|NA|NA C PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit MAG.C3.5_02167 265072.Mfla_0722 5.6e-59 233.8 Nitrosomonadales fdsG 1.6.5.3 ko:K00124,ko:K00127,ko:K00334,ko:K00335 ko00190,ko00630,ko00680,ko01100,ko01120,ko01200,map00190,map00630,map00680,map01100,map01120,map01200 M00144 R00519,R11945 RC00061,RC02796 ko00000,ko00001,ko00002,ko01000 3.D.1 Bacteria 1RHBU@1224,2KMRQ@206350,2VSVZ@28216,COG1905@1,COG1905@2 NA|NA|NA C PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit MAG.C3.5_02168 666681.M301_1209 1.2e-163 583.6 Nitrosomonadales acoR ko:K21405 ko00000,ko03000 Bacteria 1NRG5@1224,2KKV7@206350,2VICI@28216,COG3284@1,COG3284@2 NA|NA|NA KQ GAF domain MAG.C3.5_02169 583345.Mmol_0791 7e-265 919.5 Nitrosomonadales aldA 1.2.1.3 ko:K00128,ko:K00138,ko:K18370 ko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00640,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00640,map00903,map00981,map01100,map01110,map01120,map01130 M00135 R00264,R00631,R00710,R00711,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146,R10703 RC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00545,RC00816,RC01500 ko00000,ko00001,ko00002,ko01000 Bacteria 1MU1V@1224,2KM04@206350,2VHNV@28216,COG1012@1,COG1012@2 NA|NA|NA C PFAM Aldehyde dehydrogenase MAG.C3.5_02170 666681.M301_0903 7e-49 199.9 Nitrosomonadales ko:K09959 ko00000 Bacteria 1RGYH@1224,2KN6J@206350,2VSRW@28216,COG3564@1,COG3564@2 NA|NA|NA S Protein of unknown function (DUF779) MAG.C3.5_02171 582744.Msip34_1153 4.9e-197 693.7 Nitrosomonadales amt ko:K03320 ko00000,ko02000 1.A.11 Bacteria 1NR9F@1224,2KKIZ@206350,2VI9I@28216,COG0004@1,COG0004@2 NA|NA|NA P Ammonium Transporter Family MAG.C3.5_02172 582744.Msip34_1147 1.4e-201 709.1 Nitrosomonadales pap Bacteria 1MVE2@1224,2KKKJ@206350,2VGZV@28216,COG2326@1,COG2326@2 NA|NA|NA S Polyphosphate kinase 2 (PPK2) MAG.C3.5_02173 582744.Msip34_1146 6.9e-58 230.7 Nitrosomonadales Bacteria 1NM2K@1224,2EM7S@1,2KMSQ@206350,2VYUH@28216,33EWW@2 NA|NA|NA MAG.C3.5_02174 582744.Msip34_1146 3.6e-64 251.5 Nitrosomonadales Bacteria 1NM2K@1224,2EM7S@1,2KMSQ@206350,2VYUH@28216,33EWW@2 NA|NA|NA MAG.C3.5_02175 265072.Mfla_1111 6.3e-189 666.8 Nitrosomonadales pilU ko:K02670 ko00000,ko02035,ko02044 3.A.15.2 Bacteria 1QTTX@1224,2KNIN@206350,2VIWS@28216,COG5008@1,COG5008@2 NA|NA|NA NU Type II/IV secretion system protein MAG.C3.5_02176 582744.Msip34_1144 8.6e-107 393.7 Nitrosomonadales gluQ GO:0000166,GO:0002097,GO:0003674,GO:0005488,GO:0005524,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 ko:K01894 ko00000,ko01000,ko01007,ko03016 Bacteria 1MUN7@1224,2KM5R@206350,2VHYK@28216,COG0008@1,COG0008@2 NA|NA|NA J Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon MAG.C3.5_02177 1112274.KI911560_gene848 7.1e-118 429.9 Nitrosomonadales aspS GO:0003674,GO:0003824,GO:0004812,GO:0004815,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006422,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.12 ko:K01876 ko00970,map00970 M00359,M00360 R05577 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 iJN678.aspS,iSFV_1184.SFV_1868 Bacteria 1MUXB@1224,2KM0Z@206350,2VHKQ@28216,COG0173@1,COG0173@2 NA|NA|NA J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) MAG.C3.5_02178 1132855.KB913035_gene447 5.9e-62 243.8 Nitrosomonadales apt 2.4.2.7 ko:K00759 ko00230,ko01100,map00230,map01100 R00190,R01229,R04378 RC00063 ko00000,ko00001,ko01000,ko04147 Bacteria 1MVZ6@1224,2KMKX@206350,2VI7G@28216,COG0503@1,COG0503@2 NA|NA|NA F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis MAG.C3.5_02179 582744.Msip34_2449 5.3e-59 233.8 Nitrosomonadales nudB GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008828,GO:0009058,GO:0009108,GO:0009110,GO:0009396,GO:0009987,GO:0016053,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017144,GO:0018130,GO:0019177,GO:0019438,GO:0019752,GO:0034641,GO:0042364,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046655,GO:0046656,GO:0046872,GO:0047429,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.3.1.181,3.6.1.13,3.6.1.55,3.6.1.67 ko:K01515,ko:K03574,ko:K03801,ko:K08310 ko00230,ko00785,ko00790,ko01100,map00230,map00785,map00790,map01100 M00126 R01054,R04638,R07766,R07769 RC00002,RC00039,RC00992,RC02867 ko00000,ko00001,ko00002,ko01000,ko03400 iSFV_1184.SFV_1867,iSF_1195.SF1875,iSFxv_1172.SFxv_2099,iS_1188.S1941,iY75_1357.Y75_RS09795,iYL1228.KPN_02379 Bacteria 1RH6N@1224,2KMQJ@206350,2VR3U@28216,COG0494@1,COG0494@2 NA|NA|NA L NUDIX domain MAG.C3.5_02180 582744.Msip34_2448 1.1e-190 672.5 Nitrosomonadales nadA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 ko:K03517 ko00760,ko01100,map00760,map01100 M00115 R04292 RC01119 ko00000,ko00001,ko00002,ko01000 Bacteria 1MWQU@1224,2KM5Z@206350,2VH6N@28216,COG0379@1,COG0379@2 NA|NA|NA H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate MAG.C3.5_02181 265072.Mfla_2380 1.1e-85 323.2 Nitrosomonadales ybhP Bacteria 1MVN7@1224,2KKB8@206350,2VJYW@28216,COG3568@1,COG3568@2 NA|NA|NA L PFAM Endonuclease Exonuclease phosphatase MAG.C3.5_02182 582744.Msip34_2446 1.4e-135 489.6 Nitrosomonadales clsB ko:K06131 ko00564,ko01100,map00564,map01100 R07390 RC00017 ko00000,ko00001,ko01000 Bacteria 1MWUW@1224,2KMI5@206350,2VI41@28216,COG1502@1,COG1502@2 NA|NA|NA I phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol MAG.C3.5_02184 582744.Msip34_1036 3.1e-17 94.7 Nitrosomonadales mliC ko:K09914 ko00000 Bacteria 1PJJS@1224,2KNAS@206350,2W81D@28216,COG3895@1,COG3895@2 NA|NA|NA S Periplasmic Protein MAG.C3.5_02186 582744.Msip34_2415 2.7e-73 281.2 Nitrosomonadales Bacteria 1RA5G@1224,2KMMP@206350,2W271@28216,COG0432@1,COG0432@2 NA|NA|NA S Uncharacterised protein family UPF0047 MAG.C3.5_02187 582744.Msip34_2411 1.7e-46 192.2 Nitrosomonadales Bacteria 1QTTR@1224,2KMWZ@206350,2WGT1@28216,COG2905@1,COG2905@2 NA|NA|NA T PFAM CBS domain containing protein MAG.C3.5_02188 582744.Msip34_2410 5.6e-65 253.8 Nitrosomonadales yetL GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 ko:K15973 ko00000,ko03000 Bacteria 1N1RV@1224,2KMKD@206350,2VSUW@28216,COG1846@1,COG1846@2 NA|NA|NA K PFAM regulatory protein MarR MAG.C3.5_02189 265072.Mfla_2357 1.3e-31 142.5 Nitrosomonadales Bacteria 1NP1S@1224,2KN47@206350,2WG7T@28216,COG4319@1,COG4319@2 NA|NA|NA S Nuclear transport factor 2 (NTF2) domain MAG.C3.5_02190 265072.Mfla_2356 5.9e-126 457.2 Nitrosomonadales yijE GO:0000099,GO:0000101,GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072348,GO:0098656,GO:1901682,GO:1903825,GO:1905039 Bacteria 1NEYM@1224,2KMJ2@206350,2VPAG@28216,COG0697@1,COG0697@2 NA|NA|NA EG EamA-like transporter family MAG.C3.5_02191 1502770.JQMG01000001_gene531 1.2e-113 416.0 Nitrosomonadales yebC GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010212,GO:0044424,GO:0044444,GO:0044464,GO:0050896 Bacteria 1MW3X@1224,2KM7Q@206350,2VIA5@28216,COG0217@1,COG0217@2 NA|NA|NA K Transcriptional regulator MAG.C3.5_02192 666681.M301_2520 3.4e-81 307.8 Nitrosomonadales ruvC GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 ko:K01159 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1MUJI@1224,2KM83@206350,2VQ3U@28216,COG0817@1,COG0817@2 NA|NA|NA L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group MAG.C3.5_02193 582744.Msip34_2405 1.1e-80 306.2 Nitrosomonadales ruvA GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009378,GO:0009379,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022607,GO:0031668,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0065003,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1MWJR@1224,2KM9H@206350,2VJ98@28216,COG0632@1,COG0632@2 NA|NA|NA L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB MAG.C3.5_02194 1101195.Meth11DRAFT_2365 1.9e-168 598.6 Nitrosomonadales ruvB GO:0000725,GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0031668,GO:0032392,GO:0032508,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 3.6.4.12 ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1MU38@1224,2KKIG@206350,2VH0J@28216,COG2255@1,COG2255@2 NA|NA|NA L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing MAG.C3.5_02195 265072.Mfla_2343 7.7e-41 173.3 Nitrosomonadales ybgC 3.1.2.23 ko:K01075,ko:K07107 ko00130,ko00362,ko01100,ko01110,ko01120,map00130,map00362,map01100,map01110,map01120 R01301 RC00004,RC00174 ko00000,ko00001,ko01000 Bacteria 1MZH6@1224,2KMYI@206350,2VUEV@28216,COG0824@1,COG0824@2 NA|NA|NA S tol-pal system-associated acyl-CoA thioesterase MAG.C3.5_02196 1236959.BAMT01000002_gene2030 8.7e-98 363.2 Nitrosomonadales tolQ ko:K03562 ko01120,map01120 ko00000,ko02000 1.A.30.2.2 Bacteria 1NCWW@1224,2KM84@206350,2VJPW@28216,COG0811@1,COG0811@2 NA|NA|NA U PFAM MotA TolQ ExbB proton channel MAG.C3.5_02197 666681.M301_2510 6.3e-48 196.8 Nitrosomonadales tolR GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0015833,GO:0015893,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032153,GO:0042221,GO:0042493,GO:0042886,GO:0042891,GO:0043213,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 ko:K03560 ko00000,ko02000 1.A.30.2.2 Bacteria 1RGWR@1224,2KMYC@206350,2VT20@28216,COG0848@1,COG0848@2 NA|NA|NA U PFAM Biopolymer transport protein ExbD TolR MAG.C3.5_02198 582744.Msip34_2400 1.7e-49 203.0 Nitrosomonadales tolA GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0016020,GO:0016021,GO:0016032,GO:0017038,GO:0019058,GO:0019904,GO:0030260,GO:0031224,GO:0031226,GO:0032153,GO:0033036,GO:0042221,GO:0042493,GO:0042886,GO:0042891,GO:0043213,GO:0044403,GO:0044409,GO:0044419,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046677,GO:0046678,GO:0046718,GO:0046790,GO:0050896,GO:0051179,GO:0051234,GO:0051301,GO:0051701,GO:0051704,GO:0051716,GO:0051806,GO:0051828,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:0071944,GO:0097718,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701 ko:K03646 ko00000,ko02000 2.C.1.2 Bacteria 1RKZU@1224,2KMSA@206350,2WGP5@28216,COG3064@1,COG3064@2 NA|NA|NA M TIGRFAM protein TolA MAG.C3.5_02199 582744.Msip34_2399 9.5e-130 470.3 Nitrosomonadales tolB GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0017038,GO:0019534,GO:0019904,GO:0022857,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0032991,GO:0033036,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0043213,GO:0044464,GO:0044877,GO:0045184,GO:0046677,GO:0046678,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901998 ko:K03641 ko00000,ko02000 2.C.1.2 Bacteria 1MV09@1224,2KKVW@206350,2VH9R@28216,COG0823@1,COG0823@2 NA|NA|NA U Involved in the TonB-independent uptake of proteins MAG.C3.5_02200 582744.Msip34_2398 3.8e-56 224.6 Nitrosomonadales pal GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032153,GO:0044425,GO:0044462,GO:0044464,GO:0051301,GO:0071944,GO:0098552 ko:K03640 ko00000,ko02000 2.C.1.2 Bacteria 1MZTV@1224,2KMV3@206350,2VSP6@28216,COG2885@1,COG2885@2 NA|NA|NA M Belongs to the ompA family MAG.C3.5_02201 582744.Msip34_2397 2e-48 199.5 Nitrosomonadales cpoB GO:0005575,GO:0005623,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043933,GO:0044085,GO:0044464,GO:0051259,GO:0051260,GO:0051301,GO:0065003,GO:0071840 3.5.1.28 ko:K01448 ko01503,map01503 M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 Bacteria 1MUSV@1224,2KMMT@206350,2VIPC@28216,COG1729@1,COG1729@2 NA|NA|NA D Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division MAG.C3.5_02202 582744.Msip34_2396 2.9e-87 328.2 Nitrosomonadales queE 1.97.1.4,4.3.99.3 ko:K04068,ko:K10026 ko00790,ko01100,map00790,map01100 R04710,R10002 RC02989 ko00000,ko00001,ko01000,ko03016 iAF987.Gmet_1658 Bacteria 1MUJ2@1224,2KKT4@206350,2VGZ7@28216,COG0602@1,COG0602@2 NA|NA|NA H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds MAG.C3.5_02203 1101195.Meth11DRAFT_2356 6.5e-98 363.6 Nitrosomonadales queC 6.3.4.20 ko:K06920 ko00790,ko01100,map00790,map01100 R09978 RC00959 ko00000,ko00001,ko01000,ko03016 iAF987.Gmet_3075 Bacteria 1MU5V@1224,2KKW4@206350,2VHY3@28216,COG0603@1,COG0603@2 NA|NA|NA F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) MAG.C3.5_02204 582744.Msip34_2394 2.2e-35 154.5 Nitrosomonadales rpsP GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02959 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Bacteria 1MZCT@1224,2KN3F@206350,2VTYP@28216,COG0228@1,COG0228@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bS16 family MAG.C3.5_02205 582744.Msip34_2393 3.5e-59 234.6 Nitrosomonadales rimM GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0030490,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 ko:K02860 ko00000,ko03009 Bacteria 1MWQR@1224,2KMQK@206350,2VQ0H@28216,COG0806@1,COG0806@2 NA|NA|NA J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes MAG.C3.5_02206 265072.Mfla_2332 2.1e-105 388.7 Nitrosomonadales trmD GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228,4.6.1.12 ko:K00554,ko:K01770 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R00597,R05637 RC00002,RC00003,RC00334,RC01440 ko00000,ko00001,ko00002,ko01000,ko03016 Bacteria 1MUN1@1224,2KKEG@206350,2VHPY@28216,COG0336@1,COG0336@2 NA|NA|NA J Belongs to the RNA methyltransferase TrmD family MAG.C3.5_02207 1132855.KB913035_gene568 4e-55 220.7 Nitrosomonadales rplS GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02884 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1RH3A@1224,2KMTA@206350,2VR2S@28216,COG0335@1,COG0335@2 NA|NA|NA J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site MAG.C3.5_02208 582744.Msip34_2390 5.5e-43 180.6 Nitrosomonadales ogt 2.1.1.63 ko:K00567,ko:K10778 ko00000,ko01000,ko03000,ko03400 Bacteria 1N2YQ@1224,2KN1I@206350,2VU5R@28216,COG0350@1,COG0350@2 NA|NA|NA L PFAM Methylated-DNA- protein -cysteine S-methyltransferase DNA binding MAG.C3.5_02209 1132855.KB913035_gene570 8.1e-128 463.4 Nitrosomonadales xerD GO:0000150,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008907,GO:0009009,GO:0009037,GO:0009314,GO:0009628,GO:0009987,GO:0015074,GO:0032991,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0071139,GO:0071704,GO:0090304,GO:0140097,GO:1901360 ko:K04763 ko00000,ko03036 Bacteria 1MVNF@1224,2KM9Y@206350,2VIHD@28216,COG4974@1,COG4974@2 NA|NA|NA L TIGRFAM tyrosine recombinase XerD MAG.C3.5_02210 1121035.AUCH01000007_gene446 5.8e-48 197.6 Rhodocyclales acrR ko:K03577,ko:K18135 ko01501,map01501 M00647 ko00000,ko00001,ko00002,ko03000 Bacteria 1N659@1224,2KX9V@206389,2VS47@28216,COG1309@1,COG1309@2 NA|NA|NA K MAATS-type transcriptional repressor, C-terminal region MAG.C3.5_02211 1000565.METUNv1_02701 1.1e-66 260.8 Rhodocyclales cmeA ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 Bacteria 1MU78@1224,2KVSS@206389,2VINC@28216,COG0845@1,COG0845@2 NA|NA|NA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family MAG.C3.5_02212 1123393.KB891316_gene1945 0.0 1349.7 Hydrogenophilales ko:K18138 ko01501,ko01503,map01501,map01503 M00647,M00699,M00718 ko00000,ko00001,ko00002,ko01504,ko02000 2.A.6.2 Bacteria 1KR9P@119069,1MU48@1224,2VHFI@28216,COG0841@1,COG0841@2 NA|NA|NA V AcrB/AcrD/AcrF family MAG.C3.5_02213 1485544.JQKP01000008_gene1754 1.4e-116 426.8 Nitrosomonadales oprM ko:K18139 ko01501,ko02024,map01501,map02024 M00642,M00643,M00647,M00718,M00768,M00822 ko00000,ko00001,ko00002,ko01504,ko02000 1.B.17,2.A.6.2 Bacteria 1MUA8@1224,2VI5V@28216,44VTV@713636,COG1538@1,COG1538@2 NA|NA|NA M TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family MAG.C3.5_02214 582744.Msip34_2386 8.6e-49 199.5 Nitrosomonadales folB 1.13.11.81,3.1.3.18,4.1.2.25,5.1.99.8 ko:K01091,ko:K01633 ko00630,ko00790,ko01100,ko01110,ko01130,map00630,map00790,map01100,map01110,map01130 M00126,M00840 R01334,R03504,R11037,R11073 RC00017,RC00721,RC00943,RC01479,RC03333,RC03334 ko00000,ko00001,ko00002,ko01000 Bacteria 1MZ8Z@1224,2KMXM@206350,2VUVV@28216,COG1539@1,COG1539@2 NA|NA|NA H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin MAG.C3.5_02215 582744.Msip34_2385 1.5e-77 295.8 Nitrosomonadales plsY GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.3.1.15,2.7.9.2,3.5.1.104 ko:K01007,ko:K03977,ko:K08591,ko:K22278 ko00561,ko00564,ko00620,ko00680,ko00720,ko01100,ko01110,ko01120,ko01200,map00561,map00564,map00620,map00680,map00720,map01100,map01110,map01120,map01200 M00089,M00173,M00374 R00199,R00851,R09380 RC00002,RC00004,RC00015,RC00039,RC00041 ko00000,ko00001,ko00002,ko01000,ko01004,ko03009 Bacteria 1RD4Z@1224,2KMN9@206350,2VQ10@28216,COG0344@1,COG0344@2 NA|NA|NA I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP MAG.C3.5_02216 582744.Msip34_2384 3.9e-158 564.3 Nitrosomonadales tsaD GO:0000287,GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140030,GO:0140032,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 ko:K01409,ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 R10648 RC00070,RC00416 ko00000,ko00001,ko00002,ko01000,ko02044,ko03016 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4 Bacteria 1MU6S@1224,2KKKS@206350,2VHDR@28216,COG0533@1,COG0533@2 NA|NA|NA O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction MAG.C3.5_02218 1132855.KB913035_gene2166 1.4e-36 159.5 Nitrosomonadales Bacteria 1N539@1224,2E1J6@1,2KNYF@206350,2VUGG@28216,32WWW@2 NA|NA|NA MAG.C3.5_02219 1278309.KB907101_gene546 4.3e-42 177.9 Oceanospirillales Bacteria 1RKVW@1224,1SDSV@1236,1XPPV@135619,2CZND@1,32T6R@2 NA|NA|NA MAG.C3.5_02220 1278309.KB907101_gene547 1.2e-44 186.4 Oceanospirillales Bacteria 1RM1M@1224,1SF8A@1236,1XPGA@135619,2BPVC@1,32IP1@2 NA|NA|NA MAG.C3.5_02221 1101195.Meth11DRAFT_1776 2.1e-244 851.3 Nitrosomonadales pdhD GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.8.1.4 ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00036,M00307,M00532 R00209,R01221,R01698,R03815,R07618,R08549 RC00004,RC00022,RC00583,RC02742,RC02833,RC02834 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1MU2U@1224,2KKFS@206350,2VI6G@28216,COG1249@1,COG1249@2 NA|NA|NA C pyridine nucleotide-disulphide oxidoreductase dimerisation # 2017 queries scanned # Total time (seconds): 4.78218817711 # Rate: 421.77 q/s